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The map label for this gene is ybhA [C]

Identifier: 15603420

GI number: 15603420

Start: 1757681

End: 1758493

Strand: Direct

Name: ybhA [C]

Synonym: PM1555

Alternate gene names: 15603420

Gene position: 1757681-1758493 (Clockwise)

Preceding gene: 15603419

Following gene: 15603421

Centisome position: 77.86

GC content: 38.13

Gene sequence:

>813_bases
ATGCGCATTCCTAATTATCGTGACCAAATTAAAATTGTCTTTTTTGATATTGATGAAACATTACTCGTTAAAGACGAAGA
CTATATTCCTGCGACGGTGGTCCCCGCTATTCGAAAATTAAAAGAAAATGGCATTGTACCTGCTATCGCAACGGGGCGTA
CCTTGTCTAACTTTCCGCCTAAGATTAAAGGATTGATTGAGCAAACGGACATGAATTTGTTTGTAACAATGAATGGTCAA
TATGTGAGTTATCAGAATGAGCCAATCGGGAAGCATCCTTTATCTAAAGCAAAAATCCAAGAGTTCGTTGATTTTTGTGA
TCAACATCAGATTGTTTATGCGCAAGTGTCACCGACAGATACCGCAGTTTCAGCGATAACTGATCAGGTTCGTGATGCAT
TGGATCCGCTAAAAGGGCATTATCATGTAGATAAAGACTATTTTAAACATCATGATGTTTTTCAGATACTGGCTTTTTAT
GATGCTACGCAAGATCAATTTGTCCAAGATTCTGGTGTACTGAAAGGATTACAATCGGTACGCTGGCATAAATACTCGGT
TGATTTATTTGATGAAAAAATCTCAAAAGCTACGGGTATCGCTTGTGCAATTCAACATTTTGGCTTTGCAATGGAAAATG
TGATGGCATTTGGTGATGGCTTGAATGATATTGAAATGTTAAGAATGGCAGGAGTGGGTGTTGCAATGGGGAATGCACAT
CATCAGCTAAAAACAGTAGCCGATCATGTCACCTTACCGATCAAAGAACATGGCATTGAGTATTTCCTAAAACAAGCTAA
ATTGATTGACTAA

Upstream 100 bases:

>100_bases
GTTCAGGGCGAACAGAGCAAACGATAAAGTCCCACTCATCTTCTTTCACGCCACAATACTTTCCTGAAGCTGTATTTTCA
TTCAATTTAGAAGGAAGAGT

Downstream 100 bases:

>100_bases
ATTTATTTTACTTTTGCGATGCGTGTCGCAAAAGTAACTTATTCTTTTGCCCTTTTAATATCCTGTGCTTTAGTCTGTAG
TCATTTTATGTCAAGCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphatase; Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRIPNYRDQIKIVFFDIDETLLVKDEDYIPATVVPAIRKLKENGIVPAIATGRTLSNFPPKIKGLIEQTDMNLFVTMNGQ
YVSYQNEPIGKHPLSKAKIQEFVDFCDQHQIVYAQVSPTDTAVSAITDQVRDALDPLKGHYHVDKDYFKHHDVFQILAFY
DATQDQFVQDSGVLKGLQSVRWHKYSVDLFDEKISKATGIACAIQHFGFAMENVMAFGDGLNDIEMLRMAGVGVAMGNAH
HQLKTVADHVTLPIKEHGIEYFLKQAKLID

Sequences:

>Translated_270_residues
MRIPNYRDQIKIVFFDIDETLLVKDEDYIPATVVPAIRKLKENGIVPAIATGRTLSNFPPKIKGLIEQTDMNLFVTMNGQ
YVSYQNEPIGKHPLSKAKIQEFVDFCDQHQIVYAQVSPTDTAVSAITDQVRDALDPLKGHYHVDKDYFKHHDVFQILAFY
DATQDQFVQDSGVLKGLQSVRWHKYSVDLFDEKISKATGIACAIQHFGFAMENVMAFGDGLNDIEMLRMAGVGVAMGNAH
HQLKTVADHVTLPIKEHGIEYFLKQAKLID
>Mature_270_residues
MRIPNYRDQIKIVFFDIDETLLVKDEDYIPATVVPAIRKLKENGIVPAIATGRTLSNFPPKIKGLIEQTDMNLFVTMNGQ
YVSYQNEPIGKHPLSKAKIQEFVDFCDQHQIVYAQVSPTDTAVSAITDQVRDALDPLKGHYHVDKDYFKHHDVFQILAFY
DATQDQFVQDSGVLKGLQSVRWHKYSVDLFDEKISKATGIACAIQHFGFAMENVMAFGDGLNDIEMLRMAGVGVAMGNAH
HQLKTVADHVTLPIKEHGIEYFLKQAKLID

Specific function: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase cyclophilin-type domain [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=293, Percent_Identity=26.6211604095563, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015891
- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR002130 [H]

Pfam domain/function: PF08282 Hydrolase_3; PF00160 Pro_isomerase [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 30481; Mature: 30481

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPNYRDQIKIVFFDIDETLLVKDEDYIPATVVPAIRKLKENGIVPAIATGRTLSNFPP
CCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCH
KIKGLIEQTDMNLFVTMNGQYVSYQNEPIGKHPLSKAKIQEFVDFCDQHQIVYAQVSPTD
HHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCH
TAVSAITDQVRDALDPLKGHYHVDKDYFKHHDVFQILAFYDATQDQFVQDSGVLKGLQSV
HHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RWHKYSVDLFDEKISKATGIACAIQHFGFAMENVMAFGDGLNDIEMLRMAGVGVAMGNAH
HHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCHH
HQLKTVADHVTLPIKEHGIEYFLKQAKLID
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIPNYRDQIKIVFFDIDETLLVKDEDYIPATVVPAIRKLKENGIVPAIATGRTLSNFPP
CCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCH
KIKGLIEQTDMNLFVTMNGQYVSYQNEPIGKHPLSKAKIQEFVDFCDQHQIVYAQVSPTD
HHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCH
TAVSAITDQVRDALDPLKGHYHVDKDYFKHHDVFQILAFYDATQDQFVQDSGVLKGLQSV
HHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RWHKYSVDLFDEKISKATGIACAIQHFGFAMENVMAFGDGLNDIEMLRMAGVGVAMGNAH
HHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCHH
HQLKTVADHVTLPIKEHGIEYFLKQAKLID
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA