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The map label for this gene is yfbU [C]

Identifier: 15603365

GI number: 15603365

Start: 1696748

End: 1697242

Strand: Reverse

Name: yfbU [C]

Synonym: PM1500

Alternate gene names: 15603365

Gene position: 1697242-1696748 (Counterclockwise)

Preceding gene: 15603366

Following gene: 15603361

Centisome position: 75.18

GC content: 36.57

Gene sequence:

>495_bases
ATGGAAATGACATCGACACAACGTTTAATCTTGGCCAACCAATATAAATTAATGGGCTTATTAGATAGTCAAAATGCACA
AAAATATCAGCGCCTCGAAGCCATTGTAAAAGGCGGATTTGCCTTAGAACTCAAAGAATTAGATAAAGAATTTTCCGATG
TGTCAGAACAGGAATGCCAAACTGTATTAGATACCTTAGAAATGTACAACGCCTTACAAACGTCTTACAACAACCTGAGT
GATAAATCAGCTCTCACACCACATCGTTTACAATTTGCGGGTTATTGTGCCGTACGTGAGAAAAAATATTTAAATTATTT
GCGTTTCATCACTGGTGTAGAAGGAAAATATCAAGAATTTATGCGTTGTGAACACGGTTGTGACTCACAAGTCCCAATGT
GGGATAAATATATGCGTATGTTAGATGTTTGGCATGCTTGTCCACATGGTTACCACTTAAGCATGACTGAAATTCAAAAT
ATCTTAAATGCATAG

Upstream 100 bases:

>100_bases
CCAAAACCTTGAATATCGAGTGAAAGACGGCAAAGTAAGCACACCAAAACAGGATCTCGCTCAAGATATCTTAAATGAAA
TTGATTAAAAGGAATACATT

Downstream 100 bases:

>100_bases
CATCAAAGAACAACGTATTAAACAAAGGGGAAGTAATGGCTTCCCTTTTTTATCCACAAAAATGGATATATCATTTTATA
ACATCTAAAAAAATAAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEMTSTQRLILANQYKLMGLLDSQNAQKYQRLEAIVKGGFALELKELDKEFSDVSEQECQTVLDTLEMYNALQTSYNNLS
DKSALTPHRLQFAGYCAVREKKYLNYLRFITGVEGKYQEFMRCEHGCDSQVPMWDKYMRMLDVWHACPHGYHLSMTEIQN
ILNA

Sequences:

>Translated_164_residues
MEMTSTQRLILANQYKLMGLLDSQNAQKYQRLEAIVKGGFALELKELDKEFSDVSEQECQTVLDTLEMYNALQTSYNNLS
DKSALTPHRLQFAGYCAVREKKYLNYLRFITGVEGKYQEFMRCEHGCDSQVPMWDKYMRMLDVWHACPHGYHLSMTEIQN
ILNA
>Mature_164_residues
MEMTSTQRLILANQYKLMGLLDSQNAQKYQRLEAIVKGGFALELKELDKEFSDVSEQECQTVLDTLEMYNALQTSYNNLS
DKSALTPHRLQFAGYCAVREKKYLNYLRFITGVEGKYQEFMRCEHGCDSQVPMWDKYMRMLDVWHACPHGYHLSMTEIQN
ILNA

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0304 family

Homologues:

Organism=Escherichia coli, GI87082081, Length=164, Percent_Identity=50.609756097561, Blast_Score=197, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1500_PASMU (Q9CKV5)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246439.1
- ProteinModelPortal:   Q9CKV5
- SMR:   Q9CKV5
- GeneID:   1244847
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1500
- NMPDR:   fig|272843.1.peg.1501
- HOGENOM:   HBG297202
- OMA:   ADHHFNS
- ProtClustDB:   PRK05445
- BioCyc:   PMUL272843:PM1500-MONOMER
- HAMAP:   MF_00762
- InterPro:   IPR005587
- InterPro:   IPR023146
- InterPro:   IPR023145
- Gene3D:   G3DSA:1.10.3190.10
- Gene3D:   G3DSA:1.10.287.680
- PIRSF:   PIRSF006272
- ProDom:   PD035118

Pfam domain/function: PF03887 YfbU

EC number: NA

Molecular weight: Translated: 19139; Mature: 19139

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMTSTQRLILANQYKLMGLLDSQNAQKYQRLEAIVKGGFALELKELDKEFSDVSEQECQ
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHH
TVLDTLEMYNALQTSYNNLSDKSALTPHRLQFAGYCAVREKKYLNYLRFITGVEGKYQEF
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MRCEHGCDSQVPMWDKYMRMLDVWHACPHGYHLSMTEIQNILNA
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCC
>Mature Secondary Structure
MEMTSTQRLILANQYKLMGLLDSQNAQKYQRLEAIVKGGFALELKELDKEFSDVSEQECQ
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHCCCHHHHH
TVLDTLEMYNALQTSYNNLSDKSALTPHRLQFAGYCAVREKKYLNYLRFITGVEGKYQEF
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MRCEHGCDSQVPMWDKYMRMLDVWHACPHGYHLSMTEIQNILNA
HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEECHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100