| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yadQ [C]
Identifier: 15603282
GI number: 15603282
Start: 1598907
End: 1600277
Strand: Direct
Name: yadQ [C]
Synonym: PM1417
Alternate gene names: 15603282
Gene position: 1598907-1600277 (Clockwise)
Preceding gene: 15603253
Following gene: 15603283
Centisome position: 70.83
GC content: 47.56
Gene sequence:
>1371_bases ATGTTTTTTCCAACGCAATTGAATAGCAAAGTGCGGTATGTTTTACATAAAAAATTACGCCAAACACACCGTATTTCTCG TAAAAGTTTAGAATTTAGCGCACTCCTGATTGGTGCAGCGCTCGTCGCCCTTTTTTCTCTTGGTTTTGCCAAATTGGCAG ATCTCGGTCTCGAGTGGAATGCGCACTGGAGTGCACAATATCCCCTTACTGTTTGGCTTGTGTTACCGAGCGGCTTAGCT TTACTGGCGTGGTTTACCGCAAAATACACCCCTTATGTGGCAGGCAGTGGCATTCCACAAGTTATCGCGGCGATAAGTTT ACCACATGGGAATAATAAGAGTCGTCTGGTCGCCTTTTGGCAGACTCTGTGGAAAATTCCGCTCACGTTTCTTGCCATGC TGATTGGGGCATCCGTAGGGCGTGAAGGTCCTTCCGTGCAAGTTGGTGCCGCCGTGATGCTCGCTTGGGGTAATCTTTGT CGCAAAAAAGGCATTGCCTTTAACGGACTCAGCGCTAATGAATTAATGGCGACCGGTGCCGCTGGCGGACTAGCTGCGGC ATTCAATGCGCCTTTGGCTGGCGTGATCTTTGCCATCGAAGAACTTGGTCGTGGCGTGCTATTACGCTGGGAACGACGTG TCTTATTGGGTGTGTTAGCCGCCGGCTTTATTTTAGTGGCAATTGAAGGTAACAACCCTTACTTTCCACAATACCATGGT GAAACCTCTGTACCTTATCTGTTTTTATGGGTCAGTTTATGTGGCGTTGTATGTGGTTTCTTTGGCGGGATCTTTGCGCG TTTATTAGTCAAAGGATTAGCGGGGCTTTCTCCGTCCAAAATACGCGGTTGGATTCGCCGTCATCCGATTTATGTGGCAT TCATTTTAGGGCTGTTCCTCGCGGCCTTAGGGACTTATACCCAAGGCAAAACCTATGGTACCGGTTATTATGTGGTGGCA GACGCATTAGATGGACAACCTTTAAGCAGTGAATTTGGTTTATTAAAACTTCTCTCCACTGTCGCTACTTATTGGACGGG CATCGCTGGCGGTATCTTTACACCAGCATTAACTACCGGCGCCGGGATTGGTGCACAAATTTGGGCAATGACTGGCAGTA TCGTTGATCAACGCTTACTGGTTTTACTCTGCATGGCGGGCTTTTTAGCCGGAGCGACCCAATCGCCTGTGACAGCAAGC GTAGTAGTGATGGAAATGACGGGCTGTCAGCCTGTCTTATTTTGGTTATTGATTTGTTGCTTGGTTTCGTCCATTATTTC ACGCCAATTTCACCCAAAACCCTTTTATCATTTTGCGGCTGGACGTTTTCGCCAACGCATTCAAGAAGACACAAGAGAAC AAGAAAAATGA
Upstream 100 bases:
>100_bases ACTAAATCAAAGAAATCCGCTTGATTGTCTGCTGAATATTTAGCTAAACAGGATTTTACGTTATAATTTGCCACTCTCTT CCTGACTCAATCAAGCATCT
Downstream 100 bases:
>100_bases TCCAAAACCAACCGCACTTTTACCGTGGGCGCTTTTCCGTTGCCCCAATGCTCGATTGGACCACTCGCCATTGTCGCTAT TTCCATCGTCAATTTAGCCA
Product: hypothetical protein
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MFFPTQLNSKVRYVLHKKLRQTHRISRKSLEFSALLIGAALVALFSLGFAKLADLGLEWNAHWSAQYPLTVWLVLPSGLA LLAWFTAKYTPYVAGSGIPQVIAAISLPHGNNKSRLVAFWQTLWKIPLTFLAMLIGASVGREGPSVQVGAAVMLAWGNLC RKKGIAFNGLSANELMATGAAGGLAAAFNAPLAGVIFAIEELGRGVLLRWERRVLLGVLAAGFILVAIEGNNPYFPQYHG ETSVPYLFLWVSLCGVVCGFFGGIFARLLVKGLAGLSPSKIRGWIRRHPIYVAFILGLFLAALGTYTQGKTYGTGYYVVA DALDGQPLSSEFGLLKLLSTVATYWTGIAGGIFTPALTTGAGIGAQIWAMTGSIVDQRLLVLLCMAGFLAGATQSPVTAS VVVMEMTGCQPVLFWLLICCLVSSIISRQFHPKPFYHFAAGRFRQRIQEDTREQEK
Sequences:
>Translated_456_residues MFFPTQLNSKVRYVLHKKLRQTHRISRKSLEFSALLIGAALVALFSLGFAKLADLGLEWNAHWSAQYPLTVWLVLPSGLA LLAWFTAKYTPYVAGSGIPQVIAAISLPHGNNKSRLVAFWQTLWKIPLTFLAMLIGASVGREGPSVQVGAAVMLAWGNLC RKKGIAFNGLSANELMATGAAGGLAAAFNAPLAGVIFAIEELGRGVLLRWERRVLLGVLAAGFILVAIEGNNPYFPQYHG ETSVPYLFLWVSLCGVVCGFFGGIFARLLVKGLAGLSPSKIRGWIRRHPIYVAFILGLFLAALGTYTQGKTYGTGYYVVA DALDGQPLSSEFGLLKLLSTVATYWTGIAGGIFTPALTTGAGIGAQIWAMTGSIVDQRLLVLLCMAGFLAGATQSPVTAS VVVMEMTGCQPVLFWLLICCLVSSIISRQFHPKPFYHFAAGRFRQRIQEDTREQEK >Mature_456_residues MFFPTQLNSKVRYVLHKKLRQTHRISRKSLEFSALLIGAALVALFSLGFAKLADLGLEWNAHWSAQYPLTVWLVLPSGLA LLAWFTAKYTPYVAGSGIPQVIAAISLPHGNNKSRLVAFWQTLWKIPLTFLAMLIGASVGREGPSVQVGAAVMLAWGNLC RKKGIAFNGLSANELMATGAAGGLAAAFNAPLAGVIFAIEELGRGVLLRWERRVLLGVLAAGFILVAIEGNNPYFPQYHG ETSVPYLFLWVSLCGVVCGFFGGIFARLLVKGLAGLSPSKIRGWIRRHPIYVAFILGLFLAALGTYTQGKTYGTGYYVVA DALDGQPLSSEFGLLKLLSTVATYWTGIAGGIFTPALTTGAGIGAQIWAMTGSIVDQRLLVLLCMAGFLAGATQSPVTAS VVVMEMTGCQPVLFWLLICCLVSSIISRQFHPKPFYHFAAGRFRQRIQEDTREQEK
Specific function: Unknown
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786350, Length=443, Percent_Identity=28.8939051918736, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI87081943, Length=150, Percent_Identity=34, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17532615, Length=389, Percent_Identity=25.9640102827763, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 49350; Mature: 49350
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFPTQLNSKVRYVLHKKLRQTHRISRKSLEFSALLIGAALVALFSLGFAKLADLGLEWN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AHWSAQYPLTVWLVLPSGLALLAWFTAKYTPYVAGSGIPQVIAAISLPHGNNKSRLVAFW CCCCCCCCEEEEEEHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH QTLWKIPLTFLAMLIGASVGREGPSVQVGAAVMLAWGNLCRKKGIAFNGLSANELMATGA HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCEECCCCHHHHHHCCC AGGLAAAFNAPLAGVIFAIEELGRGVLLRWERRVLLGVLAAGFILVAIEGNNPYFPQYHG CCCHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCC ETSVPYLFLWVSLCGVVCGFFGGIFARLLVKGLAGLSPSKIRGWIRRHPIYVAFILGLFL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHH AALGTYTQGKTYGTGYYVVADALDGQPLSSEFGLLKLLSTVATYWTGIAGGIFTPALTTG HHHCCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGIGAQIWAMTGSIVDQRLLVLLCMAGFLAGATQSPVTASVVVMEMTGCQPVLFWLLICC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH LVSSIISRQFHPKPFYHFAAGRFRQRIQEDTREQEK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFFPTQLNSKVRYVLHKKLRQTHRISRKSLEFSALLIGAALVALFSLGFAKLADLGLEWN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AHWSAQYPLTVWLVLPSGLALLAWFTAKYTPYVAGSGIPQVIAAISLPHGNNKSRLVAFW CCCCCCCCEEEEEEHHCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH QTLWKIPLTFLAMLIGASVGREGPSVQVGAAVMLAWGNLCRKKGIAFNGLSANELMATGA HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCEECCCCHHHHHHCCC AGGLAAAFNAPLAGVIFAIEELGRGVLLRWERRVLLGVLAAGFILVAIEGNNPYFPQYHG CCCHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCC ETSVPYLFLWVSLCGVVCGFFGGIFARLLVKGLAGLSPSKIRGWIRRHPIYVAFILGLFL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHH AALGTYTQGKTYGTGYYVVADALDGQPLSSEFGLLKLLSTVATYWTGIAGGIFTPALTTG HHHCCCCCCCEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGIGAQIWAMTGSIVDQRLLVLLCMAGFLAGATQSPVTASVVVMEMTGCQPVLFWLLICC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHH LVSSIISRQFHPKPFYHFAAGRFRQRIQEDTREQEK HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]