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The map label for this gene is yodB [H]

Identifier: 15603183

GI number: 15603183

Start: 1510436

End: 1511026

Strand: Direct

Name: yodB [H]

Synonym: PM1318

Alternate gene names: 15603183

Gene position: 1510436-1511026 (Clockwise)

Preceding gene: 15603177

Following gene: 15603184

Centisome position: 66.91

GC content: 40.1

Gene sequence:

>591_bases
TTGCCGCGAATTATACGGTTTTTGTTGGAAAACACCAAGCTTGTCGAGCAGGCTTGTGTATTTATTGACATTTTATACTT
GGTTGGAAAGGAATGTGATATGTCTCAAAAATACCCGAAGCCAATGATTATCCTTCATTGGCTCACATTATTGTTGGTGT
TAATAGCTTATTTTACAGGGGATTATCCGCCTGCGGATGGCTTGATGGGGGAGATACATGTAGCAAGTGGTCTAAGTCTT
GCCATGTTGTTGCTGTTACGTGTGGGGTTACGTTGGCATTATCGCAATCAATTGCCTGCACATAAGCTAACGCGTTGGCA
ACATATTGCCACACATTCTGTGCAAATGTTGCTTTATTTATGTCTGTTGCTGACGCCTATTGCTGGGTATTTTACATTGA
CTGCTGATGCGGATGACTTTATGTTATTTGGGATGAACTTGCCTTATTTTAGTCTTGAAATTTCTTTAGGTAAGGCACAT
GTGATTTTGGCGAATAGCTTTATTGCGTTGTCAGGCGTGCATGCCTTAGCAGCACTATTTCATCATGTTATCTTAAAAGA
TAATGTGTTAAAGAGTATGTCGCCACATTAA

Upstream 100 bases:

>100_bases
CGGCAACTTCCACAGTTTTACGTTTTTGATCAGCAAAGGTTGGTAAATTCTCTGATTCTTGATTATTAAATGACATATTT
TTGTTTATAATGAGGCTAAT

Downstream 100 bases:

>100_bases
CCTGTGCGAGAGAATTTTCAAAGTGCGGTCGGTTTTTTTAAATGCTTTGATCGTACCTGTTTTCGGATTTTTTTATTGAT
GATACTTGCTCAATCTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPRIIRFLLENTKLVEQACVFIDILYLVGKECDMSQKYPKPMIILHWLTLLLVLIAYFTGDYPPADGLMGEIHVASGLSL
AMLLLLRVGLRWHYRNQLPAHKLTRWQHIATHSVQMLLYLCLLLTPIAGYFTLTADADDFMLFGMNLPYFSLEISLGKAH
VILANSFIALSGVHALAALFHHVILKDNVLKSMSPH

Sequences:

>Translated_196_residues
MPRIIRFLLENTKLVEQACVFIDILYLVGKECDMSQKYPKPMIILHWLTLLLVLIAYFTGDYPPADGLMGEIHVASGLSL
AMLLLLRVGLRWHYRNQLPAHKLTRWQHIATHSVQMLLYLCLLLTPIAGYFTLTADADDFMLFGMNLPYFSLEISLGKAH
VILANSFIALSGVHALAALFHHVILKDNVLKSMSPH
>Mature_195_residues
PRIIRFLLENTKLVEQACVFIDILYLVGKECDMSQKYPKPMIILHWLTLLLVLIAYFTGDYPPADGLMGEIHVASGLSLA
MLLLLRVGLRWHYRNQLPAHKLTRWQHIATHSVQMLLYLCLLLTPIAGYFTLTADADDFMLFGMNLPYFSLEISLGKAHV
ILANSFIALSGVHALAALFHHVILKDNVLKSMSPH

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI87082013, Length=172, Percent_Identity=31.3953488372093, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 22182; Mature: 22051

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIIRFLLENTKLVEQACVFIDILYLVGKECDMSQKYPKPMIILHWLTLLLVLIAYFTG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
DYPPADGLMGEIHVASGLSLAMLLLLRVGLRWHYRNQLPAHKLTRWQHIATHSVQMLLYL
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
CLLLTPIAGYFTLTADADDFMLFGMNLPYFSLEISLGKAHVILANSFIALSGVHALAALF
HHHHHHHHHHEEEECCCCCEEEEECCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHH
HHVILKDNVLKSMSPH
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRIIRFLLENTKLVEQACVFIDILYLVGKECDMSQKYPKPMIILHWLTLLLVLIAYFTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
DYPPADGLMGEIHVASGLSLAMLLLLRVGLRWHYRNQLPAHKLTRWQHIATHSVQMLLYL
CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
CLLLTPIAGYFTLTADADDFMLFGMNLPYFSLEISLGKAHVILANSFIALSGVHALAALF
HHHHHHHHHHEEEECCCCCEEEEECCCCEEEEEEECCCEEEEEEHHHHHHHHHHHHHHHH
HHVILKDNVLKSMSPH
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]