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The map label for this gene is rmuC [H]

Identifier: 15603132

GI number: 15603132

Start: 1459656

End: 1461305

Strand: Reverse

Name: rmuC [H]

Synonym: PM1267

Alternate gene names: 15603132

Gene position: 1461305-1459656 (Counterclockwise)

Preceding gene: 15603137

Following gene: 15603131

Centisome position: 64.73

GC content: 42.97

Gene sequence:

>1650_bases
ATGGTCAATCGCATGTCTGAACTCACTACCACACAATATTTGCTCATTATCGCTGTCCTTATCATCAGTTGCGTGGTGCT
ATTTTTTATCAGCGCGCGTCGTCAACGTGACAGCCAAGAGCTACAACAGGATCTCAATAAAACCATTGAGGATTTTAATC
AATTATTAAGCAAATTTGAGGCGGTTCAACAAGCCAAAAATCAATTGGAACAACATGTGGTGAAATATCAAACCACCGCA
GAAGGTTTACAAGTGCGTTTGATTGAGCGTGATGACAAATTAGCCTATTTGCAAAAAGAGTTAGATGAGGAACAAGCTCG
CCATAATGACATTGCGGAAAAAATCACCGCACTCAAAGAACGCTTTGGGATTGCCTCTGCTCAAGCGGAAAGTTTGGCAA
AACAACTTGAACATAGCCAAGCCAATTTCACCCGTAAAGAACAAGAAAATCAGGAATTAATGGCAAAATTGACCACACTT
TCGCAAGAATTGACGGAACTCAAAACTACCTTAAGCGAAAAAGAAAAACACTTTGCTGAGCAACAACAACATATCGAACA
AAGTAAGCAACAACTGAGCACCGAATTTCAAAACCTCGCTAACCGCATTTTAGACGAAAAAAGCCGTAGCTTTAGCCAAA
GCAATCAAACTGCGCTAGATAGCTTGCTTAAACCGTTCCGTGAACAAATCGAAGGGTTCCAAAAACGGGTCAATGAAATC
CATTCTGAATCGGTGAAAGGCAATGCCGGCTTAGAAGCGGAAATCAAAAAAGTGTTAGAAATCGGCTTAAATATGTCGCA
ACAAGCAGATAACCTCACCTCTGCCTTAAAAGGTGAAAAGAAAACCTTAGGCAACTGGGGCGAGGTACAACTGGAACGTG
CCTTGCAATTAGCGGGCTTGTTAGAAGGAGAACATTACAGCGCCCAAGCGCATCTCAAAGACGGCGAGGGGAAACACAAT
TACCCCGATTTTGTGCTGAATTTACCTGATAACAAACATTTAATCATCGATAGCAAAATGTCGCTCGTTGCTTATGAAAG
TGCGGTCAATGCAGAAGATGATCTCAAACGCCAAAATAAATTGCGAGAACATATTAAAGCGATCAAGAACCATATTGATG
ACCTTTCACGCAAGGATTACAGCAATTTAATTGGTATGCGTAGCCCGAATTTTGTACTGATGTTTATTGCCGTCGAACCT
GCCTACATTGAAGCCATGAAAATGGATCCAACGTTGTTTAATTACGGTTATGAGAAAAACGTCATTTTAGTATCCCACAC
GACCCTTATGCCAATTTTACGCACCGTGGCAAACTTGTGGCGAATTGAGCGAGGCAATGCCGAAGCGAAAGAGATCAGCG
CGCGGGCGGGTGATATTTACAACCAAATCTGTGTCATTGCTGAACGCTTAGGCAAACTGGGCAACACCCTGTCCTCTGCG
AGCAGTCATTACAACAGCACTGTGACGGCATTGGTTGGGCAGCAAGGTCTGGTCGGTAAAGTCGAACGTTTTAAAGATCT
TTCTGCTAAGGCCAACAAAACTATGCCCAATGTCGAACTGCTACACCATGCCGTAGAATCAGAACGTTTAGACGTGATTA
AAGCCGATACCCCAGAGGCACAACCACAGAAAGACAACACAGCACAATAA

Upstream 100 bases:

>100_bases
TGTCATAAGATCACCGACTAAATAAAAAAGATTATAACCTGTTAGGATAAATCCACCAGATTCCTTTATACTTTAAACGC
TAATTAACTTTCTTCAAAAA

Downstream 100 bases:

>100_bases
ACAAGCAACATAGGATTAATTCCGTGACAAAGATCACAATTTTTTAACAAAATTCTTCTCTTTTTGGCGAAAAAAGGTAG
TCTTATTGCACTTTAGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MVNRMSELTTTQYLLIIAVLIISCVVLFFISARRQRDSQELQQDLNKTIEDFNQLLSKFEAVQQAKNQLEQHVVKYQTTA
EGLQVRLIERDDKLAYLQKELDEEQARHNDIAEKITALKERFGIASAQAESLAKQLEHSQANFTRKEQENQELMAKLTTL
SQELTELKTTLSEKEKHFAEQQQHIEQSKQQLSTEFQNLANRILDEKSRSFSQSNQTALDSLLKPFREQIEGFQKRVNEI
HSESVKGNAGLEAEIKKVLEIGLNMSQQADNLTSALKGEKKTLGNWGEVQLERALQLAGLLEGEHYSAQAHLKDGEGKHN
YPDFVLNLPDNKHLIIDSKMSLVAYESAVNAEDDLKRQNKLREHIKAIKNHIDDLSRKDYSNLIGMRSPNFVLMFIAVEP
AYIEAMKMDPTLFNYGYEKNVILVSHTTLMPILRTVANLWRIERGNAEAKEISARAGDIYNQICVIAERLGKLGNTLSSA
SSHYNSTVTALVGQQGLVGKVERFKDLSAKANKTMPNVELLHHAVESERLDVIKADTPEAQPQKDNTAQ

Sequences:

>Translated_549_residues
MVNRMSELTTTQYLLIIAVLIISCVVLFFISARRQRDSQELQQDLNKTIEDFNQLLSKFEAVQQAKNQLEQHVVKYQTTA
EGLQVRLIERDDKLAYLQKELDEEQARHNDIAEKITALKERFGIASAQAESLAKQLEHSQANFTRKEQENQELMAKLTTL
SQELTELKTTLSEKEKHFAEQQQHIEQSKQQLSTEFQNLANRILDEKSRSFSQSNQTALDSLLKPFREQIEGFQKRVNEI
HSESVKGNAGLEAEIKKVLEIGLNMSQQADNLTSALKGEKKTLGNWGEVQLERALQLAGLLEGEHYSAQAHLKDGEGKHN
YPDFVLNLPDNKHLIIDSKMSLVAYESAVNAEDDLKRQNKLREHIKAIKNHIDDLSRKDYSNLIGMRSPNFVLMFIAVEP
AYIEAMKMDPTLFNYGYEKNVILVSHTTLMPILRTVANLWRIERGNAEAKEISARAGDIYNQICVIAERLGKLGNTLSSA
SSHYNSTVTALVGQQGLVGKVERFKDLSAKANKTMPNVELLHHAVESERLDVIKADTPEAQPQKDNTAQ
>Mature_549_residues
MVNRMSELTTTQYLLIIAVLIISCVVLFFISARRQRDSQELQQDLNKTIEDFNQLLSKFEAVQQAKNQLEQHVVKYQTTA
EGLQVRLIERDDKLAYLQKELDEEQARHNDIAEKITALKERFGIASAQAESLAKQLEHSQANFTRKEQENQELMAKLTTL
SQELTELKTTLSEKEKHFAEQQQHIEQSKQQLSTEFQNLANRILDEKSRSFSQSNQTALDSLLKPFREQIEGFQKRVNEI
HSESVKGNAGLEAEIKKVLEIGLNMSQQADNLTSALKGEKKTLGNWGEVQLERALQLAGLLEGEHYSAQAHLKDGEGKHN
YPDFVLNLPDNKHLIIDSKMSLVAYESAVNAEDDLKRQNKLREHIKAIKNHIDDLSRKDYSNLIGMRSPNFVLMFIAVEP
AYIEAMKMDPTLFNYGYEKNVILVSHTTLMPILRTVANLWRIERGNAEAKEISARAGDIYNQICVIAERLGKLGNTLSSA
SSHYNSTVTALVGQQGLVGKVERFKDLSAKANKTMPNVELLHHAVESERLDVIKADTPEAQPQKDNTAQ

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

Organism=Escherichia coli, GI1790266, Length=392, Percent_Identity=37.5, Blast_Score=279, Evalue=4e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 62230; Mature: 62230

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure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CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]