| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603114
Identifier: 15603114
GI number: 15603114
Start: 1442239
End: 1443348
Strand: Reverse
Name: 15603114
Synonym: PM1249
Alternate gene names: NA
Gene position: 1443348-1442239 (Counterclockwise)
Preceding gene: 15603115
Following gene: 15603113
Centisome position: 63.94
GC content: 44.23
Gene sequence:
>1110_bases ATGAAACAGCAATTTCATCGTGGTTTAAGCGCACTCGCCGCGTTAGTCACACTCTCTTTTGCGACGCAAGCGCTCGCTAA CGATCCTTTTGTGGCAGAAGCCAAACAACATGTCGCTGCCGCAACGGCACAACAAACGGTCTGGGACGGACCTACCACTG GACCTAAATTACAACCAAGTAAAAATGTGATTTTTGTTGCTTCCGACATGAAAAATGGCGGTGTACTTGGCGTGATTGAT GGCATGAAAGAAGCCACTGCGGTCGCGGGTTGGAAATTTGATGTGCTTGATGGGGCAGGTTCTGTGAATAACCAACTTTC TGCCTTAAACCAAGCGATCGCACGTAAACCTGATGCGATTGTGATTGGCGGTTGGAACCCTAATGTGGCAAAAATTCCTT TAGGCAAAGCCAATAAAAATGGAATTACTCTTGTTGCTTGGCATGCAACACCAGAGCCAGGTCCAATTGATAAATATAAT ATTTTCTACAATGTGACATCAGACTCCGACCAGATTGCTAAACTCTCTGCACAACTTGCGGTCGCAAATTCAGATGGGAA AGCTAAAGTGGTTATTCTGACCGACTCGTTATATGAAATCGCGTTACGCAAAGCAAATGTGATGAAAGATGTCATTGAGC AATGCAAAGAATGTAAAGTATTGGAATTTATTGATACACCATTGGCAGACACCTCAAGCCGTATGCCGAGCTTGACCTTT AGCTTATTGCAAAAATATGGCGATGATCTGCAATACACCTTAGCGATCAACGACCTCTACTTTGATTTCATGGCGCCATC ATTACGTTCTGCTAATAAAGGCGAGATGCCTTATAACATTTCGGCTGGCGACGGTTCGGTGACCGCTTACCAACGTATTC GTACCAACAATCATCAATTTGCAACCGTACCAGAACCGTTAAATTTACATGGCTGGCAGCTTGTCGATGAGCTAAATCGC GCCTTTGCCAAAGAGAAACCGTCTGGTTATATCACCCCAGCTCACCTCGTCATTAAAGACAACGTGGCATTTGACGGTGG TGAGAAAAATCTTTACGACCCACAAAATGGTTATAAAGATGCTTATAAACGCATTTGGGATGTGAAGTAA
Upstream 100 bases:
>100_bases CTATGCACAGCGCAAACGTTTATTAAATCAAAAAGCAGTACACAAAAGAGCAACAAAATAACTTTGTTGTTGATACTCAT CTAATACTGAGGAGAACTTT
Downstream 100 bases:
>100_bases TTCGTCATGGCGGTCGTGAAAATTTGTAAAAAACGACCGCACTTTCCTCATAAGGAGAGCTTATGTTACCCGCAAAAATT GAAATTTATGATCCACGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKQQFHRGLSALAALVTLSFATQALANDPFVAEAKQHVAAATAQQTVWDGPTTGPKLQPSKNVIFVASDMKNGGVLGVID GMKEATAVAGWKFDVLDGAGSVNNQLSALNQAIARKPDAIVIGGWNPNVAKIPLGKANKNGITLVAWHATPEPGPIDKYN IFYNVTSDSDQIAKLSAQLAVANSDGKAKVVILTDSLYEIALRKANVMKDVIEQCKECKVLEFIDTPLADTSSRMPSLTF SLLQKYGDDLQYTLAINDLYFDFMAPSLRSANKGEMPYNISAGDGSVTAYQRIRTNNHQFATVPEPLNLHGWQLVDELNR AFAKEKPSGYITPAHLVIKDNVAFDGGEKNLYDPQNGYKDAYKRIWDVK
Sequences:
>Translated_369_residues MKQQFHRGLSALAALVTLSFATQALANDPFVAEAKQHVAAATAQQTVWDGPTTGPKLQPSKNVIFVASDMKNGGVLGVID GMKEATAVAGWKFDVLDGAGSVNNQLSALNQAIARKPDAIVIGGWNPNVAKIPLGKANKNGITLVAWHATPEPGPIDKYN IFYNVTSDSDQIAKLSAQLAVANSDGKAKVVILTDSLYEIALRKANVMKDVIEQCKECKVLEFIDTPLADTSSRMPSLTF SLLQKYGDDLQYTLAINDLYFDFMAPSLRSANKGEMPYNISAGDGSVTAYQRIRTNNHQFATVPEPLNLHGWQLVDELNR AFAKEKPSGYITPAHLVIKDNVAFDGGEKNLYDPQNGYKDAYKRIWDVK >Mature_369_residues MKQQFHRGLSALAALVTLSFATQALANDPFVAEAKQHVAAATAQQTVWDGPTTGPKLQPSKNVIFVASDMKNGGVLGVID GMKEATAVAGWKFDVLDGAGSVNNQLSALNQAIARKPDAIVIGGWNPNVAKIPLGKANKNGITLVAWHATPEPGPIDKYN IFYNVTSDSDQIAKLSAQLAVANSDGKAKVVILTDSLYEIALRKANVMKDVIEQCKECKVLEFIDTPLADTSSRMPSLTF SLLQKYGDDLQYTLAINDLYFDFMAPSLRSANKGEMPYNISAGDGSVTAYQRIRTNNHQFATVPEPLNLHGWQLVDELNR AFAKEKPSGYITPAHLVIKDNVAFDGGEKNLYDPQNGYKDAYKRIWDVK
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40158; Mature: 40158
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQFHRGLSALAALVTLSFATQALANDPFVAEAKQHVAAATAQQTVWDGPTTGPKLQPS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC KNVIFVASDMKNGGVLGVIDGMKEATAVAGWKFDVLDGAGSVNNQLSALNQAIARKPDAI CCEEEEEECCCCCCEEEEECCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEE VIGGWNPNVAKIPLGKANKNGITLVAWHATPEPGPIDKYNIFYNVTSDSDQIAKLSAQLA EEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHEEEEE VANSDGKAKVVILTDSLYEIALRKANVMKDVIEQCKECKVLEFIDTPLADTSSRMPSLTF EECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCCCCCCCHHHH SLLQKYGDDLQYTLAINDLYFDFMAPSLRSANKGEMPYNISAGDGSVTAYQRIRTNNHQF HHHHHCCCCEEEEEEEEHHHHHHHCHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEE ATVPEPLNLHGWQLVDELNRAFAKEKPSGYITPAHLVIKDNVAFDGGEKNLYDPQNGYKD EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCHHH AYKRIWDVK HHHHHCCCC >Mature Secondary Structure MKQQFHRGLSALAALVTLSFATQALANDPFVAEAKQHVAAATAQQTVWDGPTTGPKLQPS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC KNVIFVASDMKNGGVLGVIDGMKEATAVAGWKFDVLDGAGSVNNQLSALNQAIARKPDAI CCEEEEEECCCCCCEEEEECCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEE VIGGWNPNVAKIPLGKANKNGITLVAWHATPEPGPIDKYNIFYNVTSDSDQIAKLSAQLA EEECCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHEEEEE VANSDGKAKVVILTDSLYEIALRKANVMKDVIEQCKECKVLEFIDTPLADTSSRMPSLTF EECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEHHHCCCCCCCCCCCCHHHH SLLQKYGDDLQYTLAINDLYFDFMAPSLRSANKGEMPYNISAGDGSVTAYQRIRTNNHQF HHHHHCCCCEEEEEEEEHHHHHHHCHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEE ATVPEPLNLHGWQLVDELNRAFAKEKPSGYITPAHLVIKDNVAFDGGEKNLYDPQNGYKD EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCHHH AYKRIWDVK HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA