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The map label for this gene is ygdQ [C]

Identifier: 15602931

GI number: 15602931

Start: 1256989

End: 1257717

Strand: Reverse

Name: ygdQ [C]

Synonym: PM1066

Alternate gene names: 15602931

Gene position: 1257717-1256989 (Counterclockwise)

Preceding gene: 15602932

Following gene: 15602929

Centisome position: 55.71

GC content: 41.7

Gene sequence:

>729_bases
ATGTTTGAATGGCTTGCGAGTCCGGAGGCTTGGGTTGCACTTTTTACCTTAGCTGCTTTAGAAATTGTGTTAGGGATTGA
TAACATCATTTTCATTAGTATTTTGGTTGGGCGTTTACCCGAACATCAACGCCAATCCGGACGCTTGATTGGGCTCGGTT
TGGCAATGGGAATGCGAATTTTATTATTGCTTTCTCTTTCTTGGGTCATGTCGTTGACGGCGACCTTATTTACCGTATTA
GGGGAGGCGATCTCAGGGCGTGATTTAATTTTATTGATTGGTGGCTTATTCCTAGTAGCAAAAAGTACCCATGAAATTCA
CCATGCCATGATGCCAGAAGAAGAAAATGAGGAAGAGAAACCAAAAACAGTAAGCTTTTTAGGCATCTTAACGCAGATTG
CGATTTTGGATATTGTGTTCTCATTGGATTCGGTGATTACGGCAGTAGGCATGGTAGATCAAGTGGGCGTGATGATTGTG
GCGATTGTGATGGCTGTTGGGGTAATGATGTTTGCAGCGAAACCAATCGGGGATTTTGTTGAAACGCATCCAACTTTGAA
AGTCCTTGCTCTGTCTTTCTTAATCTTAATTGGTGTGGCATTGATTGGAGAGAGTTTAGATTTCCACATTCCGAAAGGTT
ATATTTACTTTGCGATGGGCTTCTCCGTGGTGGTTGAAATGATCAACATTAAAATGCGTAAAAAGCTCATTAAAAAACCG
AGTGTGTGA

Upstream 100 bases:

>100_bases
AAATTTTACAACAATTTTTGCTTGGCACGGGGTAATTGACTTGGTGTCTTTGCACAAAATGATATGATTTATCTCATTTT
TATGAAAAAAGGAACAGACT

Downstream 100 bases:

>100_bases
GAGAACACAAAAATGGCAAGCCTGAGTCGCTTGCCATATTATTTGGGGTGAGGTTAATGTGCCTCGTCCCAGTTTTTACC
CACACCCACATCTACAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MFEWLASPEAWVALFTLAALEIVLGIDNIIFISILVGRLPEHQRQSGRLIGLGLAMGMRILLLLSLSWVMSLTATLFTVL
GEAISGRDLILLIGGLFLVAKSTHEIHHAMMPEEENEEEKPKTVSFLGILTQIAILDIVFSLDSVITAVGMVDQVGVMIV
AIVMAVGVMMFAAKPIGDFVETHPTLKVLALSFLILIGVALIGESLDFHIPKGYIYFAMGFSVVVEMINIKMRKKLIKKP
SV

Sequences:

>Translated_242_residues
MFEWLASPEAWVALFTLAALEIVLGIDNIIFISILVGRLPEHQRQSGRLIGLGLAMGMRILLLLSLSWVMSLTATLFTVL
GEAISGRDLILLIGGLFLVAKSTHEIHHAMMPEEENEEEKPKTVSFLGILTQIAILDIVFSLDSVITAVGMVDQVGVMIV
AIVMAVGVMMFAAKPIGDFVETHPTLKVLALSFLILIGVALIGESLDFHIPKGYIYFAMGFSVVVEMINIKMRKKLIKKP
SV
>Mature_242_residues
MFEWLASPEAWVALFTLAALEIVLGIDNIIFISILVGRLPEHQRQSGRLIGLGLAMGMRILLLLSLSWVMSLTATLFTVL
GEAISGRDLILLIGGLFLVAKSTHEIHHAMMPEEENEEEKPKTVSFLGILTQIAILDIVFSLDSVITAVGMVDQVGVMIV
AIVMAVGVMMFAAKPIGDFVETHPTLKVLALSFLILIGVALIGESLDFHIPKGYIYFAMGFSVVVEMINIKMRKKLIKKP
SV

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family [H]

Homologues:

Organism=Escherichia coli, GI1789197, Length=235, Percent_Identity=58.7234042553191, Blast_Score=250, Evalue=7e-68,
Organism=Escherichia coli, GI1788119, Length=239, Percent_Identity=50.2092050209205, Blast_Score=237, Evalue=5e-64,
Organism=Escherichia coli, GI87082033, Length=227, Percent_Identity=50.2202643171806, Blast_Score=217, Evalue=6e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 26457; Mature: 26457

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWLASPEAWVALFTLAALEIVLGIDNIIFISILVGRLPEHQRQSGRLIGLGLAMGMRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHH
LLLLSLSWVMSLTATLFTVLGEAISGRDLILLIGGLFLVAKSTHEIHHAMMPEEENEEEK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PKTVSFLGILTQIAILDIVFSLDSVITAVGMVDQVGVMIVAIVMAVGVMMFAAKPIGDFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ETHPTLKVLALSFLILIGVALIGESLDFHIPKGYIYFAMGFSVVVEMINIKMRKKLIKKP
HCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SV
CC
>Mature Secondary Structure
MFEWLASPEAWVALFTLAALEIVLGIDNIIFISILVGRLPEHQRQSGRLIGLGLAMGMRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEHHHHHHHHH
LLLLSLSWVMSLTATLFTVLGEAISGRDLILLIGGLFLVAKSTHEIHHAMMPEEENEEEK
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PKTVSFLGILTQIAILDIVFSLDSVITAVGMVDQVGVMIVAIVMAVGVMMFAAKPIGDFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
ETHPTLKVLALSFLILIGVALIGESLDFHIPKGYIYFAMGFSVVVEMINIKMRKKLIKKP
HCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]