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The map label for this gene is nusB

Identifier: 15602595

GI number: 15602595

Start: 859497

End: 859931

Strand: Reverse

Name: nusB

Synonym: PM0730

Alternate gene names: 15602595

Gene position: 859931-859497 (Counterclockwise)

Preceding gene: 15602596

Following gene: 15602594

Centisome position: 38.09

GC content: 39.54

Gene sequence:

>435_bases
ATGACAGAACAAAAACATGAGAAAAAAATCTCGCCACGTCGTCGTGCGAGAGAATGTGCAGTACAAGCGTTATATTCTTG
GTATGTGTCACAAAATTCCCCAGCGGAAATTGAGCTTAATTTTATGGCAGAACAGGATTTAAAAGGTGTCGATACAGCTT
ATTTCCGTCGCCTTTTCCGCCAAACCGCAGAAAATGTCGATGCAGTAGATAATATTATGATACCGTATTTGGATCGTGAG
GTCAGTGAACTTGATCCGATTGAAAAAGCCATTTTACGCCTTGCGGTCTATGAGCTTAAATTTGAATTAGACGTGCCCTA
TAAAGTTGTCATTAATGAAGCAATTGAAGTGGCAAAAGTATTTGGTGCAGAAGACAGTCATAAATATGTCAATGGCGTAT
TAGATAAAGTCGCACCGGTGTTATCACGCAAATAA

Upstream 100 bases:

>100_bases
AGCGAGCTGGCACCAAAGCGGGGAATAAAGGGGCGGAAGCTGCGTTAGTTGCTTTAGAAATGGTAAATTTATTAGCGCAA
ATTGACGCGGCGTAATTCAG

Downstream 100 bases:

>100_bases
GTAGCATAGGTGAAGAATGAGTCATGGCGAATTTGACATAATTCAACGTTATTTCACCGCGTCAAAACGCACCGCGCGTA
AAGATGTGATTTTGTCTATT

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTEQKHEKKISPRRRARECAVQALYSWYVSQNSPAEIELNFMAEQDLKGVDTAYFRRLFRQTAENVDAVDNIMIPYLDRE
VSELDPIEKAILRLAVYELKFELDVPYKVVINEAIEVAKVFGAEDSHKYVNGVLDKVAPVLSRK

Sequences:

>Translated_144_residues
MTEQKHEKKISPRRRARECAVQALYSWYVSQNSPAEIELNFMAEQDLKGVDTAYFRRLFRQTAENVDAVDNIMIPYLDRE
VSELDPIEKAILRLAVYELKFELDVPYKVVINEAIEVAKVFGAEDSHKYVNGVLDKVAPVLSRK
>Mature_143_residues
TEQKHEKKISPRRRARECAVQALYSWYVSQNSPAEIELNFMAEQDLKGVDTAYFRRLFRQTAENVDAVDNIMIPYLDREV
SELDPIEKAILRLAVYELKFELDVPYKVVINEAIEVAKVFGAEDSHKYVNGVLDKVAPVLSRK

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=124, Percent_Identity=62.9032258064516, Blast_Score=161, Evalue=2e-41,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_PASMU (P57868)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245667.1
- ProteinModelPortal:   P57868
- SMR:   P57868
- GeneID:   1244077
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0730
- NMPDR:   fig|272843.1.peg.730
- HOGENOM:   HBG734409
- OMA:   IPYKVVI
- ProtClustDB:   PRK00202
- BioCyc:   PMUL272843:PM0730-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16634; Mature: 16503

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQKHEKKISPRRRARECAVQALYSWYVSQNSPAEIELNFMAEQDLKGVDTAYFRRLFR
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
QTAENVDAVDNIMIPYLDREVSELDPIEKAILRLAVYELKFELDVPYKVVINEAIEVAKV
HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FGAEDSHKYVNGVLDKVAPVLSRK
HCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TEQKHEKKISPRRRARECAVQALYSWYVSQNSPAEIELNFMAEQDLKGVDTAYFRRLFR
CCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHH
QTAENVDAVDNIMIPYLDREVSELDPIEKAILRLAVYELKFELDVPYKVVINEAIEVAKV
HHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
FGAEDSHKYVNGVLDKVAPVLSRK
HCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100