| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is yraO [C]
Identifier: 15602513
GI number: 15602513
Start: 751348
End: 751935
Strand: Direct
Name: yraO [C]
Synonym: PM0648
Alternate gene names: 15602513
Gene position: 751348-751935 (Clockwise)
Preceding gene: 15602512
Following gene: 15602514
Centisome position: 33.28
GC content: 37.76
Gene sequence:
>588_bases ATGTTAGATAAACTCAAAGACTTATACACTGAAAGTATTCAAACACAGATTTCCGCCTCCAGTTTATTACCCGATACCAT CATACAAGCCACACAAATGATTGTGGATTGTTTGTTAAGAGGGAATAAAATTATTGCCTGCGGAAACGGACGTTCTTATA TTAATGCCCAACTGTTTGTCGCAAACTTATTAAATCGCTATGAGTTAGCCAGACCTAGTTTCCCTTCTGTTTTACTCAGT TTAGATAGCGCCATTAACGCCGCAATGGCGCTTGATAATAATACAGAAACCTTATTTCAACGCCAATTTAATGCAGTGGC TCAACAAGGGGATATTCTTATTGCTTTTTCTCCTTTGCCTCATAATGATGAAATTGTCATTAATGCAATTAACAGTGCGG TAAACAAAGGCATTATTGTAATTGTCTTAACGAGTGCCTCAAATGATCATATTCAAGGTTTTTTGACCGAACACGATCTC GAAATCGCGATTCCCGCAATCAAAGAAAGCCGAGTGATTGAAGGACATTGTTTTATTGCTAATGCAATTTGTGAACTGGT CGATCACGCCCTGTTTTCACATTCATAA
Upstream 100 bases:
>100_bases AAAATCGTAGCTTGGAAGACACTGACTGCCGGTTTGACTTAATTGCTTTCGGTAAAACCACACAAGACCTTGAATGGATT ATAAATTTTCTTGATTAATT
Downstream 100 bases:
>100_bases CTTGACAAGAATCAGGATTTCAACAACACTAACTCGCATGACAAATACAAAAGGAGATCCCTTATGCAAATCAACATGTT AAAAAAATACACTTTTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MLDKLKDLYTESIQTQISASSLLPDTIIQATQMIVDCLLRGNKIIACGNGRSYINAQLFVANLLNRYELARPSFPSVLLS LDSAINAAMALDNNTETLFQRQFNAVAQQGDILIAFSPLPHNDEIVINAINSAVNKGIIVIVLTSASNDHIQGFLTEHDL EIAIPAIKESRVIEGHCFIANAICELVDHALFSHS
Sequences:
>Translated_195_residues MLDKLKDLYTESIQTQISASSLLPDTIIQATQMIVDCLLRGNKIIACGNGRSYINAQLFVANLLNRYELARPSFPSVLLS LDSAINAAMALDNNTETLFQRQFNAVAQQGDILIAFSPLPHNDEIVINAINSAVNKGIIVIVLTSASNDHIQGFLTEHDL EIAIPAIKESRVIEGHCFIANAICELVDHALFSHS >Mature_195_residues MLDKLKDLYTESIQTQISASSLLPDTIIQATQMIVDCLLRGNKIIACGNGRSYINAQLFVANLLNRYELARPSFPSVLLS LDSAINAAMALDNNTETLFQRQFNAVAQQGDILIAFSPLPHNDEIVINAINSAVNKGIIVIVLTSASNDHIQGFLTEHDL EIAIPAIKESRVIEGHCFIANAICELVDHALFSHS
Specific function: Unknown
COG id: COG0279
COG function: function code G; Phosphoheptose isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1789539, Length=194, Percent_Identity=39.1752577319588, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1786416, Length=166, Percent_Identity=30.7228915662651, Blast_Score=78, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21300; Mature: 21300
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKLKDLYTESIQTQISASSLLPDTIIQATQMIVDCLLRGNKIIACGNGRSYINAQLFV CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH ANLLNRYELARPSFPSVLLSLDSAINAAMALDNNTETLFQRQFNAVAQQGDILIAFSPLP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCEEEEECCCC HNDEIVINAINSAVNKGIIVIVLTSASNDHIQGFLTEHDLEIAIPAIKESRVIEGHCFIA CCCCEEEEEHHHHHCCCEEEEEEECCCCCCEEEEEECCCCEEEECCCCCCEEEECHHHHH NAICELVDHALFSHS HHHHHHHHHHHHCCC >Mature Secondary Structure MLDKLKDLYTESIQTQISASSLLPDTIIQATQMIVDCLLRGNKIIACGNGRSYINAQLFV CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH ANLLNRYELARPSFPSVLLSLDSAINAAMALDNNTETLFQRQFNAVAQQGDILIAFSPLP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCEEEEECCCC HNDEIVINAINSAVNKGIIVIVLTSASNDHIQGFLTEHDLEIAIPAIKESRVIEGHCFIA CCCCEEEEEHHHHHCCCEEEEEEECCCCCCEEEEEECCCCEEEECCCCCCEEEECHHHHH NAICELVDHALFSHS HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]