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The map label for this gene is yraN [C]

Identifier: 15602512

GI number: 15602512

Start: 750986

End: 751345

Strand: Direct

Name: yraN [C]

Synonym: PM0647

Alternate gene names: 15602512

Gene position: 750986-751345 (Clockwise)

Preceding gene: 15602511

Following gene: 15602513

Centisome position: 33.27

GC content: 40.83

Gene sequence:

>360_bases
ATGTTCTCATTAAAGCGTCAACAAGGGGCGAGATTTGAATACCAAGCTCGCCTCTTTTTAGAATCAAAAGGACTACAATT
TGTAGCCGCCAATCAATCCTTTTCCTGTGGCGAATTAGATCTGATTATGCGAGATCAAGACACGCTCGTTTTTGTTGAGG
TGCGACAACGAAAAAATGCGGTTTTTGGTTCAGCAGTGGAAAGTGTTGACTGGAAAAAACAAAAAAAGTGGCTGAACGCA
GCAAGCTTATGGCTTGCACAGCAAAATCGTAGCTTGGAAGACACTGACTGCCGGTTTGACTTAATTGCTTTCGGTAAAAC
CACACAAGACCTTGAATGGATTATAAATTTTCTTGATTAA

Upstream 100 bases:

>100_bases
GGTTTGACCGGTAAACTAAGTGCGGGCGCAAACTGTAATATTGAGCGTGACATGACCTGGTTCCAATACCAAAGTGGTGG
CATTATCTCCTTGAACTAAG

Downstream 100 bases:

>100_bases
TTATGTTAGATAAACTCAAAGACTTATACACTGAAAGTATTCAAACACAGATTTCCGCCTCCAGTTTATTACCCGATACC
ATCATACAAGCCACACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MFSLKRQQGARFEYQARLFLESKGLQFVAANQSFSCGELDLIMRDQDTLVFVEVRQRKNAVFGSAVESVDWKKQKKWLNA
ASLWLAQQNRSLEDTDCRFDLIAFGKTTQDLEWIINFLD

Sequences:

>Translated_119_residues
MFSLKRQQGARFEYQARLFLESKGLQFVAANQSFSCGELDLIMRDQDTLVFVEVRQRKNAVFGSAVESVDWKKQKKWLNA
ASLWLAQQNRSLEDTDCRFDLIAFGKTTQDLEWIINFLD
>Mature_119_residues
MFSLKRQQGARFEYQARLFLESKGLQFVAANQSFSCGELDLIMRDQDTLVFVEVRQRKNAVFGSAVESVDWKKQKKWLNA
ASLWLAQQNRSLEDTDCRFDLIAFGKTTQDLEWIINFLD

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=109, Percent_Identity=51.3761467889908, Blast_Score=111, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y647_PASMU (P57862)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245584.1
- GeneID:   1243994
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0647
- NMPDR:   fig|272843.1.peg.647
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- ProtClustDB:   PRK12497
- BioCyc:   PMUL272843:PM0647-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13889; Mature: 13889

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLKRQQGARFEYQARLFLESKGLQFVAANQSFSCGELDLIMRDQDTLVFVEVRQRKNA
CCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCC
VFGSAVESVDWKKQKKWLNAASLWLAQQNRSLEDTDCRFDLIAFGKTTQDLEWIINFLD
HHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MFSLKRQQGARFEYQARLFLESKGLQFVAANQSFSCGELDLIMRDQDTLVFVEVRQRKNA
CCCCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCC
VFGSAVESVDWKKQKKWLNAASLWLAQQNRSLEDTDCRFDLIAFGKTTQDLEWIINFLD
HHHHHHHHCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100