Click here to switch to the map view.

The map label for this gene is trpH [H]

Identifier: 15602481

GI number: 15602481

Start: 718284

End: 719117

Strand: Reverse

Name: trpH [H]

Synonym: PM0616

Alternate gene names: 15602481

Gene position: 719117-718284 (Counterclockwise)

Preceding gene: 15602482

Following gene: 15602480

Centisome position: 31.85

GC content: 43.65

Gene sequence:

>834_bases
ATGACAACAATTTATGATCTTCATTGCCATAGTACTGCTTCTGATGGCGTATTATCACCGACAGAAGTCGTTGCACGAGC
TGTTGAAAAGGGAGTAAATGTACTTGCCTTGACTGATCATGATACTACGGCAGGGCTTGCGGAAGCCCGTTTAGCCGCAC
AACAAACCGATTTAACCTTGATAAGTGGCGTCGAAATTTCAACCACTTGGGAAAATCGTGCTATTCATATTGTTGGATTG
GGTTTTGATGAAACTTCAGCAAAAATGACCGCGCTTTTACGTCAACAAGCGGCATTACGCTATCAACGTGCGCTTGAGAT
TAGTGACAAATTAGCAAAAGTTGGCATTGTAGATGCATTTGAGCAAGCCAAAATGTTAGCAACGGGAGAAGTGACAAGAG
CACATTACGCACGTTTGTTGGTACAAATGGGTAAAGTCTCGAATGAGGGACAAGCTTTTAAAAAGTATCTCTCACAAGGC
AAGTCTTGCTATGTAAAAGCACAGTGGTGTGATATTCCAACTGCAATTGAGGTCATTCATCAAACCGGTGGACTCGCTGT
TTTAGCACATCCTTTACGCTATACCTTAACCAACAAATGGGTCAAAAAATTAATTGCCGATTTTGCACAATGGGGAGGCG
ATGCGATTGAAGTCGCGGGCTGTGGACAGGCACCAGAACAACGTTTGCTTCTCGCCCAATGGGCAACGGAATTTGGTTTA
CTGAGCTCTGTTGGATCAGATTTTCATTTTCCCTGTGGTTGGGTTGAGTTAGGCAAGTCGTTACTATTGCCTGCTAATTG
CGTGCCAATTTGGACAAAGTTATCGCCCAACTAA

Upstream 100 bases:

>100_bases
AACAGATTAAATAGGGTAATGAAGATAAAGGGCGGATTCACATATCTGCCCTGATGCTTTCATCGTTTCCCACTTTTACA
GGTTCAAATTAGGATAACAG

Downstream 100 bases:

>100_bases
GATGTTGCCTCGCCATCATTTGTTATCAATTGCCATTTGATAAAGTGGGGTGGGTTTAGGCATTTATATGTCATTTTTTA
AAAAAAGAGTTGACCTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTTIYDLHCHSTASDGVLSPTEVVARAVEKGVNVLALTDHDTTAGLAEARLAAQQTDLTLISGVEISTTWENRAIHIVGL
GFDETSAKMTALLRQQAALRYQRALEISDKLAKVGIVDAFEQAKMLATGEVTRAHYARLLVQMGKVSNEGQAFKKYLSQG
KSCYVKAQWCDIPTAIEVIHQTGGLAVLAHPLRYTLTNKWVKKLIADFAQWGGDAIEVAGCGQAPEQRLLLAQWATEFGL
LSSVGSDFHFPCGWVELGKSLLLPANCVPIWTKLSPN

Sequences:

>Translated_277_residues
MTTIYDLHCHSTASDGVLSPTEVVARAVEKGVNVLALTDHDTTAGLAEARLAAQQTDLTLISGVEISTTWENRAIHIVGL
GFDETSAKMTALLRQQAALRYQRALEISDKLAKVGIVDAFEQAKMLATGEVTRAHYARLLVQMGKVSNEGQAFKKYLSQG
KSCYVKAQWCDIPTAIEVIHQTGGLAVLAHPLRYTLTNKWVKKLIADFAQWGGDAIEVAGCGQAPEQRLLLAQWATEFGL
LSSVGSDFHFPCGWVELGKSLLLPANCVPIWTKLSPN
>Mature_276_residues
TTIYDLHCHSTASDGVLSPTEVVARAVEKGVNVLALTDHDTTAGLAEARLAAQQTDLTLISGVEISTTWENRAIHIVGLG
FDETSAKMTALLRQQAALRYQRALEISDKLAKVGIVDAFEQAKMLATGEVTRAHYARLLVQMGKVSNEGQAFKKYLSQGK
SCYVKAQWCDIPTAIEVIHQTGGLAVLAHPLRYTLTNKWVKKLIADFAQWGGDAIEVAGCGQAPEQRLLLAQWATEFGLL
SSVGSDFHFPCGWVELGKSLLLPANCVPIWTKLSPN

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=271, Percent_Identity=54.2435424354244, Blast_Score=279, Evalue=1e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30089; Mature: 29958

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIYDLHCHSTASDGVLSPTEVVARAVEKGVNVLALTDHDTTAGLAEARLAAQQTDLTL
CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEE
ISGVEISTTWENRAIHIVGLGFDETSAKMTALLRQQAALRYQRALEISDKLAKVGIVDAF
EECEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKMLATGEVTRAHYARLLVQMGKVSNEGQAFKKYLSQGKSCYVKAQWCDIPTAIEVIH
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHH
QTGGLAVLAHPLRYTLTNKWVKKLIADFAQWGGDAIEVAGCGQAPEQRLLLAQWATEFGL
HCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
LSSVGSDFHFPCGWVELGKSLLLPANCVPIWTKLSPN
HHHCCCCCCCCCCHHHHCHHHCCCCCCCEEEEECCCC
>Mature Secondary Structure 
TTIYDLHCHSTASDGVLSPTEVVARAVEKGVNVLALTDHDTTAGLAEARLAAQQTDLTL
CEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEE
ISGVEISTTWENRAIHIVGLGFDETSAKMTALLRQQAALRYQRALEISDKLAKVGIVDAF
EECEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQAKMLATGEVTRAHYARLLVQMGKVSNEGQAFKKYLSQGKSCYVKAQWCDIPTAIEVIH
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHH
QTGGLAVLAHPLRYTLTNKWVKKLIADFAQWGGDAIEVAGCGQAPEQRLLLAQWATEFGL
HCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
LSSVGSDFHFPCGWVELGKSLLLPANCVPIWTKLSPN
HHHCCCCCCCCCCHHHHCHHHCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]