| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yidJ [C]
Identifier: 15602463
GI number: 15602463
Start: 695592
End: 696995
Strand: Direct
Name: yidJ [C]
Synonym: PM0598
Alternate gene names: 15602463
Gene position: 695592-696995 (Clockwise)
Preceding gene: 15602462
Following gene: 15602464
Centisome position: 30.81
GC content: 38.03
Gene sequence:
>1404_bases ATGCTTGGTGCTTACGGGCACCAAGTAGTTAAAACACCGAATATTGATAGACTTGCACAAGATGGTATTCGGTTTAATAA TGCTTTTACGCCAGCTTCGGTTTGTGGACCTGCACGTACTTCTTTATTTACGGGATTAATGCCATCTTCACATGGCATTA TCAAAAATGGGGAAAAAGGCGGAACTGGAGAAATTAGTCAACAAGCGCCCAATATTGCTAAATTAGCAGGCTATAATACT TATGTTGTGGGTAAATGGCATGTCGGAACAAAATCTGTGCCTGAAGATTATGATATCAAGGGACATAATTTTGATGGTTA TGGTTATCCTGGAAGCGGCGTATATAAAAATTTGGTTTTCAATCAACCGCCTACACATTCTAACCGTTATAAAGAATGGT TAGAGGAAAAAGGCTTTGAATTTCCTGAAGTAAGCAAAGCGTATTTTGGCGATAATCCGCATTTACGAGTACAAGAACTT TGTGGTTTTTTATCAGGGACGAAAGAACAAACCATTCCTTATTTCATCATTGATGAGGCGAAAAGATATATCCAAGAATC ACTAGAGGAAAACAAGCCTTTCTTTACTTGGATTAACTTTTGGGGACCTCATACCCCTTGTATCGTGCCTGAACCATATT ATTCGATGTATAGCAAAGATGATGTTGTATTGGATGAAAGTTTCTTTAAACCACTAGAAGGTAAACCGGGTCATTTCCGC ACCATTTCTAAAATGTGGGGAATGTGGGAAGCAAGTGAAGATCATTGGAAAGAAGTGATCACAAAATTCTGGGGCTATAT TACTTTAATTGATGATGCGATTGGCGAGTTATTTGCTTTTCTTGAACAACACAATTTATATGAAAGCACCTTCTTAGTTG CTACGGCTGACCATGGTGATGCAATGGGCGCACATCGAATGATTGAAAAAGGGGAGTTCATGTTTGATACGACCTACAAC ATTCCTTTAATTATCAAAGATCCAAAATCGAATCGCGTCAATGAACAAGATGATAACTTAGTTTATTTACATGATTTAAC CTCTACTGTTTATGATATTGCAGAGCAAAAAATTCCAACCGAATTCCAAGGGGAAACGTTACTACCGATCACGCGTGAAA AACAACAAAATGACCGAAAAGGGATTTTAGCGCAACTTGCAGGGCATTTTGTGTATTTTGAACAACGGATGTGGCGTCGT AAAGATTATAAATTGGTTTTTAATGCCACTGATGTGTGTGAACTTTACGATGTTCGTCGCGATCCGGAAGAAATGCACAA TTTATTCTACGATGAACGTTATAAGGACGTAAAAAAAGAAATGCTTGAAGAAATGCGTGTGGAGATGAAACGCTTGGGTG ATCCATTGGAAAATTGGGTTTACCGAATTATTGATGAAATCTAA
Upstream 100 bases:
>100_bases TGCGATCTTACAAGTGATTTTCCTATTTGTATTTCGCAGTAAAAAAGAGGTTTAAATAATGAATATTGTCTATATTCTCT TAGATCAAGTAAGGAAAGAT
Downstream 100 bases:
>100_bases TCGCTGAAAGGCGACATATGTTCGCCTTTCTTTTCTCCTCTGATTCACGTAAGGTAATGAGGTTAACGTTTTTTAGTATT TTTTAAGCGTTAACCTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEISQQAPNIAKLAGYNT YVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVFNQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQEL CGFLSGTKEQTIPYFIIDEAKRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGDAMGAHRMIEKGEFMFDTTYN IPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPTEFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRR KDYKLVFNATDVCELYDVRRDPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI
Sequences:
>Translated_467_residues MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEISQQAPNIAKLAGYNT YVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVFNQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQEL CGFLSGTKEQTIPYFIIDEAKRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGDAMGAHRMIEKGEFMFDTTYN IPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPTEFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRR KDYKLVFNATDVCELYDVRRDPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI >Mature_467_residues MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEISQQAPNIAKLAGYNT YVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVFNQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQEL CGFLSGTKEQTIPYFIIDEAKRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGDAMGAHRMIEKGEFMFDTTYN IPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPTEFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRR KDYKLVFNATDVCELYDVRRDPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI39930577, Length=446, Percent_Identity=23.3183856502242, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI4557659, Length=350, Percent_Identity=25.4285714285714, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI4503899, Length=403, Percent_Identity=22.8287841191067, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI5360208, Length=320, Percent_Identity=24.6875, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI58743319, Length=549, Percent_Identity=22.4043715846995, Blast_Score=76, Evalue=7e-14, Organism=Homo sapiens, GI157266309, Length=124, Percent_Identity=33.8709677419355, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI31742482, Length=97, Percent_Identity=34.020618556701, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI146229331, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI146229329, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI6005990, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI146229324, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI45430057, Length=231, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790112, Length=472, Percent_Identity=29.8728813559322, Blast_Score=176, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17559078, Length=220, Percent_Identity=25.9090909090909, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24666175, Length=89, Percent_Identity=39.3258426966292, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 [H]
Pfam domain/function: NA
EC number: 3.1.6.- [C]
Molecular weight: Translated: 54221; Mature: 54221
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKG CCCCCCCCEECCCCHHHHHHCCCEECCCCCCHHHCCCHHHHHHHCCCCCCCCCEECCCCC GTGEISQQAPNIAKLAGYNTYVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVF CCCCHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC NQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQELCGFLSGTKEQTIPYFIIDEA CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEHHHHHHHHCCCCCCCCCEEEEHHH KRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEEECHHHCCCCCCCCCCHH TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AMGAHRMIEKGEFMFDTTYNIPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPT HHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCC EFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRRKDYKLVFNATDVCELYDVRR CCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC DPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKG CCCCCCCCEECCCCHHHHHHCCCEECCCCCCHHHCCCHHHHHHHCCCCCCCCCEECCCCC GTGEISQQAPNIAKLAGYNTYVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVF CCCCHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC NQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQELCGFLSGTKEQTIPYFIIDEA CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEHHHHHHHHCCCCCCCCCEEEEHHH KRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEEECHHHCCCCCCCCCCHH TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC AMGAHRMIEKGEFMFDTTYNIPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPT HHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCC EFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRRKDYKLVFNATDVCELYDVRR CCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC DPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]