Definition Pasteurella multocida subsp. multocida str. Pm70, complete genome.
Accession NC_002663
Length 2,257,487

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The map label for this gene is yidJ [C]

Identifier: 15602463

GI number: 15602463

Start: 695592

End: 696995

Strand: Direct

Name: yidJ [C]

Synonym: PM0598

Alternate gene names: 15602463

Gene position: 695592-696995 (Clockwise)

Preceding gene: 15602462

Following gene: 15602464

Centisome position: 30.81

GC content: 38.03

Gene sequence:

>1404_bases
ATGCTTGGTGCTTACGGGCACCAAGTAGTTAAAACACCGAATATTGATAGACTTGCACAAGATGGTATTCGGTTTAATAA
TGCTTTTACGCCAGCTTCGGTTTGTGGACCTGCACGTACTTCTTTATTTACGGGATTAATGCCATCTTCACATGGCATTA
TCAAAAATGGGGAAAAAGGCGGAACTGGAGAAATTAGTCAACAAGCGCCCAATATTGCTAAATTAGCAGGCTATAATACT
TATGTTGTGGGTAAATGGCATGTCGGAACAAAATCTGTGCCTGAAGATTATGATATCAAGGGACATAATTTTGATGGTTA
TGGTTATCCTGGAAGCGGCGTATATAAAAATTTGGTTTTCAATCAACCGCCTACACATTCTAACCGTTATAAAGAATGGT
TAGAGGAAAAAGGCTTTGAATTTCCTGAAGTAAGCAAAGCGTATTTTGGCGATAATCCGCATTTACGAGTACAAGAACTT
TGTGGTTTTTTATCAGGGACGAAAGAACAAACCATTCCTTATTTCATCATTGATGAGGCGAAAAGATATATCCAAGAATC
ACTAGAGGAAAACAAGCCTTTCTTTACTTGGATTAACTTTTGGGGACCTCATACCCCTTGTATCGTGCCTGAACCATATT
ATTCGATGTATAGCAAAGATGATGTTGTATTGGATGAAAGTTTCTTTAAACCACTAGAAGGTAAACCGGGTCATTTCCGC
ACCATTTCTAAAATGTGGGGAATGTGGGAAGCAAGTGAAGATCATTGGAAAGAAGTGATCACAAAATTCTGGGGCTATAT
TACTTTAATTGATGATGCGATTGGCGAGTTATTTGCTTTTCTTGAACAACACAATTTATATGAAAGCACCTTCTTAGTTG
CTACGGCTGACCATGGTGATGCAATGGGCGCACATCGAATGATTGAAAAAGGGGAGTTCATGTTTGATACGACCTACAAC
ATTCCTTTAATTATCAAAGATCCAAAATCGAATCGCGTCAATGAACAAGATGATAACTTAGTTTATTTACATGATTTAAC
CTCTACTGTTTATGATATTGCAGAGCAAAAAATTCCAACCGAATTCCAAGGGGAAACGTTACTACCGATCACGCGTGAAA
AACAACAAAATGACCGAAAAGGGATTTTAGCGCAACTTGCAGGGCATTTTGTGTATTTTGAACAACGGATGTGGCGTCGT
AAAGATTATAAATTGGTTTTTAATGCCACTGATGTGTGTGAACTTTACGATGTTCGTCGCGATCCGGAAGAAATGCACAA
TTTATTCTACGATGAACGTTATAAGGACGTAAAAAAAGAAATGCTTGAAGAAATGCGTGTGGAGATGAAACGCTTGGGTG
ATCCATTGGAAAATTGGGTTTACCGAATTATTGATGAAATCTAA

Upstream 100 bases:

>100_bases
TGCGATCTTACAAGTGATTTTCCTATTTGTATTTCGCAGTAAAAAAGAGGTTTAAATAATGAATATTGTCTATATTCTCT
TAGATCAAGTAAGGAAAGAT

Downstream 100 bases:

>100_bases
TCGCTGAAAGGCGACATATGTTCGCCTTTCTTTTCTCCTCTGATTCACGTAAGGTAATGAGGTTAACGTTTTTTAGTATT
TTTTAAGCGTTAACCTCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEISQQAPNIAKLAGYNT
YVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVFNQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQEL
CGFLSGTKEQTIPYFIIDEAKRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR
TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGDAMGAHRMIEKGEFMFDTTYN
IPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPTEFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRR
KDYKLVFNATDVCELYDVRRDPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI

Sequences:

>Translated_467_residues
MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEISQQAPNIAKLAGYNT
YVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVFNQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQEL
CGFLSGTKEQTIPYFIIDEAKRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR
TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGDAMGAHRMIEKGEFMFDTTYN
IPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPTEFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRR
KDYKLVFNATDVCELYDVRRDPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI
>Mature_467_residues
MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEISQQAPNIAKLAGYNT
YVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVFNQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQEL
CGFLSGTKEQTIPYFIIDEAKRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR
TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGDAMGAHRMIEKGEFMFDTTYN
IPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPTEFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRR
KDYKLVFNATDVCELYDVRRDPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI39930577, Length=446, Percent_Identity=23.3183856502242, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI4557659, Length=350, Percent_Identity=25.4285714285714, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI4503899, Length=403, Percent_Identity=22.8287841191067, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI5360208, Length=320, Percent_Identity=24.6875, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI58743319, Length=549, Percent_Identity=22.4043715846995, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI157266309, Length=124, Percent_Identity=33.8709677419355, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI31742482, Length=97, Percent_Identity=34.020618556701, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI146229331, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI146229329, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI6005990, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI146229324, Length=92, Percent_Identity=36.9565217391304, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI45430057, Length=231, Percent_Identity=24.2424242424242, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1790112, Length=472, Percent_Identity=29.8728813559322, Blast_Score=176, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17559078, Length=220, Percent_Identity=25.9090909090909, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24666175, Length=89, Percent_Identity=39.3258426966292, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850 [H]

Pfam domain/function: NA

EC number: 3.1.6.- [C]

Molecular weight: Translated: 54221; Mature: 54221

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKG
CCCCCCCCEECCCCHHHHHHCCCEECCCCCCHHHCCCHHHHHHHCCCCCCCCCEECCCCC
GTGEISQQAPNIAKLAGYNTYVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVF
CCCCHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
NQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQELCGFLSGTKEQTIPYFIIDEA
CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEHHHHHHHHCCCCCCCCCEEEEHHH
KRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEEECHHHCCCCCCCCCCHH
TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
AMGAHRMIEKGEFMFDTTYNIPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPT
HHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCC
EFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRRKDYKLVFNATDVCELYDVRR
CCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC
DPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLGAYGHQVVKTPNIDRLAQDGIRFNNAFTPASVCGPARTSLFTGLMPSSHGIIKNGEKG
CCCCCCCCEECCCCHHHHHHCCCEECCCCCCHHHCCCHHHHHHHCCCCCCCCCEECCCCC
GTGEISQQAPNIAKLAGYNTYVVGKWHVGTKSVPEDYDIKGHNFDGYGYPGSGVYKNLVF
CCCCHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
NQPPTHSNRYKEWLEEKGFEFPEVSKAYFGDNPHLRVQELCGFLSGTKEQTIPYFIIDEA
CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCEEHHHHHHHHCCCCCCCCCEEEEHHH
KRYIQESLEENKPFFTWINFWGPHTPCIVPEPYYSMYSKDDVVLDESFFKPLEGKPGHFR
HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCEEECHHHCCCCCCCCCCHH
TISKMWGMWEASEDHWKEVITKFWGYITLIDDAIGELFAFLEQHNLYESTFLVATADHGD
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
AMGAHRMIEKGEFMFDTTYNIPLIIKDPKSNRVNEQDDNLVYLHDLTSTVYDIAEQKIPT
HHHHHHHHHCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCC
EFQGETLLPITREKQQNDRKGILAQLAGHFVYFEQRMWRRKDYKLVFNATDVCELYDVRR
CCCCCEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCC
DPEEMHNLFYDERYKDVKKEMLEEMRVEMKRLGDPLENWVYRIIDEI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]