| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is thrS [H]
Identifier: 15602458
GI number: 15602458
Start: 687397
End: 689328
Strand: Direct
Name: thrS [H]
Synonym: PM0593
Alternate gene names: 15602458
Gene position: 687397-689328 (Clockwise)
Preceding gene: 15602456
Following gene: 15602459
Centisome position: 30.45
GC content: 42.96
Gene sequence:
>1932_bases ATGCCAATTATTACTTTGCCTGACGGTTCACAGCGTCAGTTTGAACAACCTATTTCTGTGATGGATGTTGCTGCCAGTAT TGGTGCGGGTCTAGCGAAGGCTTGTATTGCAGGTCGTGTTAATGGCGAGCGGAAAGATGCTTGCGATCTGATTACTGAAG ACAGCAAACTAGAGATTATTACCGCAAAAGAGGAAGATGGTTTAGAAATTATTCGTCACTCTTGTGCGCACTTATTAGGT CATGCCATTAAACAGCTATTCCCAAATGTAAAAATGGCGATTGGTCCAACTATCGACAAGGGTTTTTATTATGACGTGGA TCTTGATCGCTCTTTAACCCAAGAGGATTTAGATGCACTTGAAAAACGTATGCTTGAACTGGCAAAAACCAACTATGATG TGGTGAAAAAAGTGGTCAGCTGGCAAGAGGCCCGTGATACCTTTGAAGCCCGCGGCGAGCCATATAAAATGGCAATTTTA GATGAAAACATCGATCGTTGCGATACGCCAGCACTTTATCATCACGAAGAATACGTTGATATGTGTCGTGGTCCACACGT ACCTAATATGCGTTTTTGCCATCACTTTAAATTAATGAAAGTTGCTGGTGCATACTGGCGTGGTGACAGCAAAAATAAAA TGTTACAACGTATCTACGGTACCGCGTGGGCAGATAAAAAACAATTAAGCGAATACTTAACTCGTTTAGAAGAAGCGGCA AAACGTGACCACCGTAAAATTGGTAAAGCGTTAGATTTATATCATATGCAAGAAGAAGCACCGGGTATGGTGTTCTGGCA CAATGACGGTTGGACAATTTTCCGTGAACTTGAAACCTTCGTGCGTACTAAATTAAAAGAATACGATTACCAAGAAGTAA AAGGTCCATTTATGATGGATCGCGTATTATGGGAAAAAACAGGGCACTGGCAAAACTACGGTGATTTGATGTTCACCACT CAATCAGAAAACCGTGAATATGCGATTAAACCGATGAACTGTCCGGGACACGTGCAAATCTTTAATCAAGGTTTAAAATC CTATCGCGATCTACCAATTCGTATGGCGGAATTTGGTTCATGCCACCGTAACGAACCGTCAGGTTCATTGCATGGCTTAA TGCGTGTACGTGGCTTCACCCAAGATGATGCGCATATTTTCTGTACGGAAGATCAAATTGAAAGTGAAGTAACGGCGTGT ATCAAAATGGTTTACGACATTTACAGCACATTCGGTTTTGAAAACATTCAAGTGAAACTGTCAACCCGTCCGGAAAAACG TATTGGTGCCGATGAGATGTGGGACAGAGCCGAAGCCGGTCTTGCTGCTGCACTGTCGCACAATGGTCTTGAATATGAAA TTCAAGAAGGTGAGGGGGCGTTCTATGGTCCGAAAATTGAATTCGCATTACGCGACTGCTTAGATCGTGAATGGCAGTGC GGAACTATTCAGTTAGACTTCGCCTTACCGGGTCGCCTCAATGCGTCTTATGTGGCAGAAGATAATGATCGCCGTACACC TGTGATGATTCACCGTGCAATTTTAGGTTCTATCGAGCGTTTCATCGGAATTATCACCGAAGAATACGCCGGTTTCTTCC CTGCATGGTTAGCGCCAACACAAGCGATCGTGATGAACATCACGGATTCACAATCTGACTATGTGCAAAAAGTGGTGAAA ACGTTATCTGACGCAGGTTTACGTGTGAAATCTGATTTACGTAATGAAAAAATCGGTTTCAAAATTCGTGAACACACCTT ACGTCGCGTACCATACATGTTAGTTTGTGGCGATAAAGAAATCGAAGCCGGTAAAGTAGCGGTGCGTACCCGTAAAGGTG CCGACCTCGGTACATTCACCATTGAAGAATTTTTAGATATCTTGAAAAAACAAGTACGTTCTCGCGAACTGAAATTACTT GGTGAAGAGTAG
Upstream 100 bases:
>100_bases TATTCAGAGTAGGAATGAGTCTAAAGTGCGGTTTATTTTTGAAAAATTTTAGCAAAAACAAGTAACCTCTCGTATGGGTT ACCACTGTAAAGGAAAACTT
Downstream 100 bases:
>100_bases TTTCATCACTTATTAGTAAAACACCGTTTGTGTAAAGACAAGCGGTGTTTTTTTATGGGAAAAGATCTTATTCGACATAA AGTGTCTTATGAAAGGTATA
Product: threonyl-tRNA synthetase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MPIITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEIITAKEEDGLEIIRHSCAHLLG HAIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDALEKRMLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAIL DENIDRCDTPALYHHEEYVDMCRGPHVPNMRFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAA KRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTT QSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTAC IKMVYDIYSTFGFENIQVKLSTRPEKRIGADEMWDRAEAGLAAALSHNGLEYEIQEGEGAFYGPKIEFALRDCLDREWQC GTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAIVMNITDSQSDYVQKVVK TLSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRSRELKLL GEE
Sequences:
>Translated_643_residues MPIITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEIITAKEEDGLEIIRHSCAHLLG HAIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDALEKRMLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAIL DENIDRCDTPALYHHEEYVDMCRGPHVPNMRFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAA KRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTT QSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTAC IKMVYDIYSTFGFENIQVKLSTRPEKRIGADEMWDRAEAGLAAALSHNGLEYEIQEGEGAFYGPKIEFALRDCLDREWQC GTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAIVMNITDSQSDYVQKVVK TLSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRSRELKLL GEE >Mature_642_residues PIITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEIITAKEEDGLEIIRHSCAHLLGH AIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDALEKRMLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAILD ENIDRCDTPALYHHEEYVDMCRGPHVPNMRFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAAK RDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYGDLMFTTQ SENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTACI KMVYDIYSTFGFENIQVKLSTRPEKRIGADEMWDRAEAGLAAALSHNGLEYEIQEGEGAFYGPKIEFALRDCLDREWQCG TIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPTQAIVMNITDSQSDYVQKVVKT LSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKEIEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRSRELKLLG EE
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0441
COG function: function code J; Threonyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI38202255, Length=651, Percent_Identity=39.0168970814132, Blast_Score=464, Evalue=1e-130, Organism=Homo sapiens, GI38570111, Length=618, Percent_Identity=39.9676375404531, Blast_Score=459, Evalue=1e-129, Organism=Homo sapiens, GI20070344, Length=643, Percent_Identity=34.8367029548989, Blast_Score=382, Evalue=1e-106, Organism=Escherichia coli, GI1788013, Length=642, Percent_Identity=79.4392523364486, Blast_Score=1102, Evalue=0.0, Organism=Escherichia coli, GI1786392, Length=198, Percent_Identity=25.7575757575758, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71984184, Length=634, Percent_Identity=37.6971608832808, Blast_Score=452, Evalue=1e-127, Organism=Caenorhabditis elegans, GI71984192, Length=634, Percent_Identity=37.6971608832808, Blast_Score=452, Evalue=1e-127, Organism=Saccharomyces cerevisiae, GI6322112, Length=649, Percent_Identity=37.7503852080123, Blast_Score=446, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6322654, Length=395, Percent_Identity=37.7215189873418, Blast_Score=293, Evalue=5e-80, Organism=Drosophila melanogaster, GI24583842, Length=633, Percent_Identity=39.0205371248025, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI28574141, Length=633, Percent_Identity=39.0205371248025, Blast_Score=472, Evalue=1e-133, Organism=Drosophila melanogaster, GI24583839, Length=633, Percent_Identity=39.0205371248025, Blast_Score=472, Evalue=1e-133,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 73720; Mature: 73589
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEII CCEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEE TAKEEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDAL ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHH EKRMLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAILDENIDRCDTPALYHHEEYVD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCHHHHH MCRGPHVPNMRFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAA HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMD HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHH RVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGS HHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEHHHHCC CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTACIKMVYDIYSTFGFENIQVKL CCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE STRPEKRIGADEMWDRAEAGLAAALSHNGLEYEIQEGEGAFYGPKIEFALRDCLDREWQC ECCCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCHHHHHHHHCCCCCCC GTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPT CEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC QAIVMNITDSQSDYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKE EEEEEEECCCHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCHHHHHHHHCCEEEEECCCC IEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRSRELKLLGEE CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIITLPDGSQRQFEQPISVMDVAASIGAGLAKACIAGRVNGERKDACDLITEDSKLEII CEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEE TAKEEDGLEIIRHSCAHLLGHAIKQLFPNVKMAIGPTIDKGFYYDVDLDRSLTQEDLDAL ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHH EKRMLELAKTNYDVVKKVVSWQEARDTFEARGEPYKMAILDENIDRCDTPALYHHEEYVD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCHHHHH MCRGPHVPNMRFCHHFKLMKVAGAYWRGDSKNKMLQRIYGTAWADKKQLSEYLTRLEEAA HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH KRDHRKIGKALDLYHMQEEAPGMVFWHNDGWTIFRELETFVRTKLKEYDYQEVKGPFMMD HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHCCCHHHH RVLWEKTGHWQNYGDLMFTTQSENREYAIKPMNCPGHVQIFNQGLKSYRDLPIRMAEFGS HHHHHHCCCCCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEHHHHCC CHRNEPSGSLHGLMRVRGFTQDDAHIFCTEDQIESEVTACIKMVYDIYSTFGFENIQVKL CCCCCCCHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE STRPEKRIGADEMWDRAEAGLAAALSHNGLEYEIQEGEGAFYGPKIEFALRDCLDREWQC ECCCCHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECCCHHHHHHHHCCCCCCC GTIQLDFALPGRLNASYVAEDNDRRTPVMIHRAILGSIERFIGIITEEYAGFFPAWLAPT CEEEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC QAIVMNITDSQSDYVQKVVKTLSDAGLRVKSDLRNEKIGFKIREHTLRRVPYMLVCGDKE EEEEEEECCCHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCHHHHHHHHCCEEEEECCCC IEAGKVAVRTRKGADLGTFTIEEFLDILKKQVRSRELKLLGEE CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA