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The map label for this gene is yjcF [C]

Identifier: 15602456

GI number: 15602456

Start: 683824

End: 685398

Strand: Direct

Name: yjcF [C]

Synonym: PM0591

Alternate gene names: 15602456

Gene position: 683824-685398 (Clockwise)

Preceding gene: 15602455

Following gene: 15602458

Centisome position: 30.29

GC content: 36.89

Gene sequence:

>1575_bases
GTGAAAAAACAATCTTCAGAAAAATTAAATATAGCTAGAATAAGTTTGGTTCTTTTTTTTGCAGTACTTTCATATTGTAT
TTTATATTATTTAGCATATTCGGATGAGCCAATAATAGAAGTGCTAAAAAATAAAATAGGTGATTCAAGGGGACTTTGGA
CACTGATTACTGCCATTATAACTGCACCAATCGCCTTTATTATTTGGGTGTTTAGAGATATCAATGCTAAACAACAAATT
GAAAATCAACGTAAAGACATTAATCTAAAAGAATTTCAAAAAATTGCCGAGTGGGTAAGTGGTTTACATTTGATTGAAGA
TGAGGTGACAGAAAAAATAGTCAACCAAACTGAACAAGAAAAAACAAGAAAATATACACAACAGTCTGAGCATTTATCTA
TTTCCACTTTTAGCAAAAAAGACGGCGCAGTAGGTTTGCAAATCGCGGCAATTTATAACTTATTGCCTTTTTACCGCGGG
GAGCATGGGGAAAGCTTTAAAAAGCCCGCATTGAATTTATTGCTTTCTGCTTGGTTAGCCTTGCAACAGAAAGAGGTTAA
AAATTTAGAGAATTTCGATGTTTTGACCAACAGGCTAGATTTTGATAATACTGTTAAGAAAATCCAAGAGAATGGACGAA
GTCCTATCGGCATTGCGATCACGCATGTATTGCTTGCTGATGGGGGAGAACATTTAGTGCAGTATCCCGAGGTTTTTCCC
AATTTATGTCTCGCAGGAATGGATTTTCATCTTCCTGGTTTAGATAAAAATGTACTATCTTTATTTATAAATATTAAAAG
TAAAGATTGTTCAGGTATTAATTTAATGGCAGCTAATCTAAATAATGTTCGTTTAGAGGGGGCTAGTTTAGAGAATGCTA
GTTTAGGGGGGGCTAGTTTATATAAGGCTAGTTTAAATGGGGCTAGTTTATATAAGGCTAGTTTAAATGGGGCTAGTTTA
TATAAGGCTAGTTTAGAGGGGGCTCGTTTAAATTGGGCTAGTTTAGAGGGGGCTCGTTTAGAGAGAGCTAGTTTAGAGGG
GGCTAGTTTAAATTGGGCTAGTTTAGAGGGGGCTCGTTTAAATTGGGCTAGTTTAGAGGGGGCTAGTTTAGAGGGGGCTC
GTTTAAATTGGGCTAGTTTAGAGGGGGCTAGTTTAGAGGGGGCTCGTTTAAATTGGGCTAGTTTAGAGGGGGCTCGTTTA
GAGAGAGCTAGTTTAGAGGGGGCTAGTTTAAATTTGGCTAGTTTAGAGGGGGCTAGTTTAGAGAGAGCTAGTTTAGAGGG
GGCTAGTTTAGAGGGGGCTAGTTTAGAGAGGGTTAGTTTAGAGAGGGCTAGTTTAGAGGGAGCTAGTTTAGAGGGAGCAA
TTTTTACTTATAATACGGATTCGAACATAAATTGCGCTGATTTAAAATCAAAAGGCGGTGTTATTTTATACTTTACCGCA
TCGGAAAAGAAACGTGATATTTGTATTCAATTAGTAAAAGCAGAGGCAACATTTGAGCATGATGTTCCAGATAATATAGA
TATTGAGAAAACCCAACAAGAGAACCCCGATTGGAAAATCTTCATTATTAAATAA

Upstream 100 bases:

>100_bases
AAAACGAGGAAGGAAAATAAAAATATACATATTTTAATTAATGCAACTAGCTGATTAATTTATTAAAATATGTATAAATA
ATAAACACAAAGGAATTAAT

Downstream 100 bases:

>100_bases
CCTTATCTTTTTTCTAAAAAACAACCGCACTTTATCACTAAAGTGCGGTTGTTTTTTGCTAGGTTTTATTAATCCGCTAA
CTTAGTGCCGTAGAAGTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MKKQSSEKLNIARISLVLFFAVLSYCILYYLAYSDEPIIEVLKNKIGDSRGLWTLITAIITAPIAFIIWVFRDINAKQQI
ENQRKDINLKEFQKIAEWVSGLHLIEDEVTEKIVNQTEQEKTRKYTQQSEHLSISTFSKKDGAVGLQIAAIYNLLPFYRG
EHGESFKKPALNLLLSAWLALQQKEVKNLENFDVLTNRLDFDNTVKKIQENGRSPIGIAITHVLLADGGEHLVQYPEVFP
NLCLAGMDFHLPGLDKNVLSLFINIKSKDCSGINLMAANLNNVRLEGASLENASLGGASLYKASLNGASLYKASLNGASL
YKASLEGARLNWASLEGARLERASLEGASLNWASLEGARLNWASLEGASLEGARLNWASLEGASLEGARLNWASLEGARL
ERASLEGASLNLASLEGASLERASLEGASLEGASLERVSLERASLEGASLEGAIFTYNTDSNINCADLKSKGGVILYFTA
SEKKRDICIQLVKAEATFEHDVPDNIDIEKTQQENPDWKIFIIK

Sequences:

>Translated_524_residues
MKKQSSEKLNIARISLVLFFAVLSYCILYYLAYSDEPIIEVLKNKIGDSRGLWTLITAIITAPIAFIIWVFRDINAKQQI
ENQRKDINLKEFQKIAEWVSGLHLIEDEVTEKIVNQTEQEKTRKYTQQSEHLSISTFSKKDGAVGLQIAAIYNLLPFYRG
EHGESFKKPALNLLLSAWLALQQKEVKNLENFDVLTNRLDFDNTVKKIQENGRSPIGIAITHVLLADGGEHLVQYPEVFP
NLCLAGMDFHLPGLDKNVLSLFINIKSKDCSGINLMAANLNNVRLEGASLENASLGGASLYKASLNGASLYKASLNGASL
YKASLEGARLNWASLEGARLERASLEGASLNWASLEGARLNWASLEGASLEGARLNWASLEGASLEGARLNWASLEGARL
ERASLEGASLNLASLEGASLERASLEGASLEGASLERVSLERASLEGASLEGAIFTYNTDSNINCADLKSKGGVILYFTA
SEKKRDICIQLVKAEATFEHDVPDNIDIEKTQQENPDWKIFIIK
>Mature_524_residues
MKKQSSEKLNIARISLVLFFAVLSYCILYYLAYSDEPIIEVLKNKIGDSRGLWTLITAIITAPIAFIIWVFRDINAKQQI
ENQRKDINLKEFQKIAEWVSGLHLIEDEVTEKIVNQTEQEKTRKYTQQSEHLSISTFSKKDGAVGLQIAAIYNLLPFYRG
EHGESFKKPALNLLLSAWLALQQKEVKNLENFDVLTNRLDFDNTVKKIQENGRSPIGIAITHVLLADGGEHLVQYPEVFP
NLCLAGMDFHLPGLDKNVLSLFINIKSKDCSGINLMAANLNNVRLEGASLENASLGGASLYKASLNGASLYKASLNGASL
YKASLEGARLNWASLEGARLERASLEGASLNWASLEGARLNWASLEGASLEGARLNWASLEGASLEGARLNWASLEGARL
ERASLEGASLNLASLEGASLERASLEGASLEGASLERVSLERASLEGASLEGAIFTYNTDSNINCADLKSKGGVILYFTA
SEKKRDICIQLVKAEATFEHDVPDNIDIEKTQQENPDWKIFIIK

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=157, Percent_Identity=34.3949044585987, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI221377802, Length=154, Percent_Identity=33.7662337662338, Blast_Score=75, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 57682; Mature: 57682

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQSSEKLNIARISLVLFFAVLSYCILYYLAYSDEPIIEVLKNKIGDSRGLWTLITAII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
TAPIAFIIWVFRDINAKQQIENQRKDINLKEFQKIAEWVSGLHLIEDEVTEKIVNQTEQE
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTRKYTQQSEHLSISTFSKKDGAVGLQIAAIYNLLPFYRGEHGESFKKPALNLLLSAWLA
HHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LQQKEVKNLENFDVLTNRLDFDNTVKKIQENGRSPIGIAITHVLLADGGEHLVQYPEVFP
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
NLCLAGMDFHLPGLDKNVLSLFINIKSKDCSGINLMAANLNNVRLEGASLENASLGGASL
HHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCE
YKASLNGASLYKASLNGASLYKASLEGARLNWASLEGARLERASLEGASLNWASLEGARL
EEECCCCCEEEEECCCCCCEEHHHCCCCEEEEECCCCCHHHHHCCCCCCCCEEECCCCEE
NWASLEGASLEGARLNWASLEGASLEGARLNWASLEGARLERASLEGASLNLASLEGASL
EEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCCC
ERASLEGASLEGASLERVSLERASLEGASLEGAIFTYNTDSNINCADLKSKGGVILYFTA
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEEC
SEKKRDICIQLVKAEATFEHDVPDNIDIEKTQQENPDWKIFIIK
CCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MKKQSSEKLNIARISLVLFFAVLSYCILYYLAYSDEPIIEVLKNKIGDSRGLWTLITAII
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
TAPIAFIIWVFRDINAKQQIENQRKDINLKEFQKIAEWVSGLHLIEDEVTEKIVNQTEQE
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTRKYTQQSEHLSISTFSKKDGAVGLQIAAIYNLLPFYRGEHGESFKKPALNLLLSAWLA
HHHHHHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LQQKEVKNLENFDVLTNRLDFDNTVKKIQENGRSPIGIAITHVLLADGGEHLVQYPEVFP
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHH
NLCLAGMDFHLPGLDKNVLSLFINIKSKDCSGINLMAANLNNVRLEGASLENASLGGASL
HHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCE
YKASLNGASLYKASLNGASLYKASLEGARLNWASLEGARLERASLEGASLNWASLEGARL
EEECCCCCEEEEECCCCCCEEHHHCCCCEEEEECCCCCHHHHHCCCCCCCCEEECCCCEE
NWASLEGASLEGARLNWASLEGASLEGARLNWASLEGARLERASLEGASLNLASLEGASL
EEEECCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEEEECCCCCC
ERASLEGASLEGASLERVSLERASLEGASLEGAIFTYNTDSNINCADLKSKGGVILYFTA
HHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEEEEEC
SEKKRDICIQLVKAEATFEHDVPDNIDIEKTQQENPDWKIFIIK
CCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA