| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602434
Identifier: 15602434
GI number: 15602434
Start: 654361
End: 655224
Strand: Reverse
Name: 15602434
Synonym: PM0569
Alternate gene names: NA
Gene position: 655224-654361 (Counterclockwise)
Preceding gene: 15602435
Following gene: 15602431
Centisome position: 29.02
GC content: 43.52
Gene sequence:
>864_bases ATGACCGCACTTTGGCATGCTATCACAGAAGCATTAACTGAAACACGCCCAGAAGAGAAATGTGCACTCGTCAATCATTT ATATGATGAATTACTGCCTCAAGTGCAGTTCTCTTGTATATCAGATTTTCCTGAGGTCAATGCCACACAAGATATCGCTG GTTTTCCAACTAGACCCCTTTGTGTTGCGCCGAAAGACGTGCCCAAACGGGCTTTTGCCACAGAGGAAGGGTACGCTGCC ACGTTACATGCCATTGCACACATTGAATTTAATGCGATTAATCTTGGACTGGATGCGGCTTGGCGTTTTGGTCGCTGTGC ACAACAAGAACTGAATCAAGGCATGGCATTTGTTAAGGATTGGCTACGGGTAGCGCGTGAGGAAAGTACCCACTTTAGTT TGCTCAATCAACATTTGAAAAGCTTAGGCTATCAGTACGGTGATTTTGAGGCACATGCGGGTTTATGGGAAATGGCACAA GCGACCGCACATGATATTTGGGAACGTATGGCACTCGTTCCGCGTGTTCTTGAAGCGCGAGGTTTGGATGCCACACCAGT GTTACAAGATAAAATCCGTCAACGGAAAGATTTTGCAGCAGTGGAAATTCTTGATGTGATTTTGCGTGATGAGATCGGGC ATGTTGGCATTGGTAATCACTGGTATCATGCCCTGTCAGAGAAACGCGGACTAGATGCGATGCAATCTTTTGCTGAATTA CTGCGTAAATATCGTATTGTGATTTTCAAAGGTGTCATTAATACAGATGCACGTTTACAAGCGGGTTTTACACAATATGA ATTAGACTGGATCTATGAAATTGAACAAACCTTAAAAAGCTATTTAAAAACAGGCAATAAATAG
Upstream 100 bases:
>100_bases GTTTGGCACGAGGGCAAATTTTTGACCGCCAAGGTCGTTTAATTGCTACGACGCAACAAGAAGGCTTAATTCGTTATACG CCTGAAAAAGAAGGTGAAAA
Downstream 100 bases:
>100_bases TATCCTCTCCCCTACCTTTTACATAAAAAATCAAAAAAACACCGCACTTTATCAAGGCGGTGTGTTGTTCATCCATCAGT TAGTCCAGCGACTTGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MTALWHAITEALTETRPEEKCALVNHLYDELLPQVQFSCISDFPEVNATQDIAGFPTRPLCVAPKDVPKRAFATEEGYAA TLHAIAHIEFNAINLGLDAAWRFGRCAQQELNQGMAFVKDWLRVAREESTHFSLLNQHLKSLGYQYGDFEAHAGLWEMAQ ATAHDIWERMALVPRVLEARGLDATPVLQDKIRQRKDFAAVEILDVILRDEIGHVGIGNHWYHALSEKRGLDAMQSFAEL LRKYRIVIFKGVINTDARLQAGFTQYELDWIYEIEQTLKSYLKTGNK
Sequences:
>Translated_287_residues MTALWHAITEALTETRPEEKCALVNHLYDELLPQVQFSCISDFPEVNATQDIAGFPTRPLCVAPKDVPKRAFATEEGYAA TLHAIAHIEFNAINLGLDAAWRFGRCAQQELNQGMAFVKDWLRVAREESTHFSLLNQHLKSLGYQYGDFEAHAGLWEMAQ ATAHDIWERMALVPRVLEARGLDATPVLQDKIRQRKDFAAVEILDVILRDEIGHVGIGNHWYHALSEKRGLDAMQSFAEL LRKYRIVIFKGVINTDARLQAGFTQYELDWIYEIEQTLKSYLKTGNK >Mature_286_residues TALWHAITEALTETRPEEKCALVNHLYDELLPQVQFSCISDFPEVNATQDIAGFPTRPLCVAPKDVPKRAFATEEGYAAT LHAIAHIEFNAINLGLDAAWRFGRCAQQELNQGMAFVKDWLRVAREESTHFSLLNQHLKSLGYQYGDFEAHAGLWEMAQA TAHDIWERMALVPRVLEARGLDATPVLQDKIRQRKDFAAVEILDVILRDEIGHVGIGNHWYHALSEKRGLDAMQSFAELL RKYRIVIFKGVINTDARLQAGFTQYELDWIYEIEQTLKSYLKTGNK
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 32698; Mature: 32566
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALWHAITEALTETRPEEKCALVNHLYDELLPQVQFSCISDFPEVNATQDIAGFPTRPL CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE CVAPKDVPKRAFATEEGYAATLHAIAHIEFNAINLGLDAAWRFGRCAQQELNQGMAFVKD EECCCCCCHHHHCCCCCHHHHHHHHHHEEEEHEEECHHHHHHHHHHHHHHHHHHHHHHHH WLRVAREESTHFSLLNQHLKSLGYQYGDFEAHAGLWEMAQATAHDIWERMALVPRVLEAR HHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDATPVLQDKIRQRKDFAAVEILDVILRDEIGHVGIGNHWYHALSEKRGLDAMQSFAEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH LRKYRIVIFKGVINTDARLQAGFTQYELDWIYEIEQTLKSYLKTGNK HHHHHHHHHCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TALWHAITEALTETRPEEKCALVNHLYDELLPQVQFSCISDFPEVNATQDIAGFPTRPL CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCE CVAPKDVPKRAFATEEGYAATLHAIAHIEFNAINLGLDAAWRFGRCAQQELNQGMAFVKD EECCCCCCHHHHCCCCCHHHHHHHHHHEEEEHEEECHHHHHHHHHHHHHHHHHHHHHHHH WLRVAREESTHFSLLNQHLKSLGYQYGDFEAHAGLWEMAQATAHDIWERMALVPRVLEAR HHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLDATPVLQDKIRQRKDFAAVEILDVILRDEIGHVGIGNHWYHALSEKRGLDAMQSFAEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH LRKYRIVIFKGVINTDARLQAGFTQYELDWIYEIEQTLKSYLKTGNK HHHHHHHHHCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]