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The map label for this gene is yfcH [H]

Identifier: 15602413

GI number: 15602413

Start: 632494

End: 633381

Strand: Reverse

Name: yfcH [H]

Synonym: PM0548

Alternate gene names: 15602413

Gene position: 633381-632494 (Counterclockwise)

Preceding gene: 15602414

Following gene: 15602412

Centisome position: 28.06

GC content: 44.26

Gene sequence:

>888_bases
ATGAATATTTTAATTACCGGTGCAACAGGATTAATTGGCTCCCACCTAACTTCGCAACTCATCAAACACGCACATGGGGT
CACCGCATTGGTTCGAGATCCTAAAGCCGCCAAACAGAAGTTACCCGCTTCTGTCACACTCATTTCTTCTCTTGCACAAT
ATACAACGCTAGATACCTTCGATGCGGTTATTAATCTCGCTGGCGAACCTATTTTTGAAAAACGTTGGACAGCCCAACAA
AAACAACGTTTAGTAGAAAGCCGCGTCAATTTAACGGCACAGTTAGTACAACGAATCAATGCCAGTCGCACCCCACCTCA
TACTTTTATTTCAGGCTCAGCCACTGGTTATTATGGACATAACGCAGAAGAAATCATCACGGAAAACGCGCCAGCAACAG
ATACGTTTCCAAGCCAACTGTGCCAACGTTGGGAATCAGAAGCGTTATGCGCCAAAACACGAGTTTGTTTATTGCGTACG
GGGATTGTCCTGAGTAAAACAGGCGGGGCTTTAGCGAAAATGCTCCCCCTCTATCGTTTAGGGCTTGGGGGAAAGTTAGG
TTCCGGTAAGCAATATTGGGCATGGATCGCACTCGACGACATGGTGAAGGGCATTTTATTTTTATTAGAAAATCACCAAT
GTCAGGGCGCCTTTAATTTGGTTTCTCCTAATCCAGTTCGTCATGTTGAATTCAACAACACTTTAGCGAACATCCTTAAG
CGACCTGCATTTGCCACTGTGCCTGAATTGCTTCTCCGCTTTTTCCTCGGCGAACGCACACAGTTACTTTTAGATAGCCA
AAAAATTGTGCCCGAAAAACTTCTCGCTCAAGGATTTGTCTTTGATTACCCTGAATTAAAATCCGCACTTCAAGCAATAC
TCAAATAA

Upstream 100 bases:

>100_bases
TTGTCACCCCCACTTTAGATGCCAATATTGCAGATTTAATCAAAAGTATCCGAAATTTATTTGAAACCAGTATATAACAC
AATGATCGTGGGGGCTTAAC

Downstream 100 bases:

>100_bases
AAAAGACCGAGGCGATTATGCCTCGATCTTTCGTTATTTTTATTTTGTTTGGTCTTAAAAAATTGAGAACGCCAATACAA
CAATTAAACCTAGCGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MNILITGATGLIGSHLTSQLIKHAHGVTALVRDPKAAKQKLPASVTLISSLAQYTTLDTFDAVINLAGEPIFEKRWTAQQ
KQRLVESRVNLTAQLVQRINASRTPPHTFISGSATGYYGHNAEEIITENAPATDTFPSQLCQRWESEALCAKTRVCLLRT
GIVLSKTGGALAKMLPLYRLGLGGKLGSGKQYWAWIALDDMVKGILFLLENHQCQGAFNLVSPNPVRHVEFNNTLANILK
RPAFATVPELLLRFFLGERTQLLLDSQKIVPEKLLAQGFVFDYPELKSALQAILK

Sequences:

>Translated_295_residues
MNILITGATGLIGSHLTSQLIKHAHGVTALVRDPKAAKQKLPASVTLISSLAQYTTLDTFDAVINLAGEPIFEKRWTAQQ
KQRLVESRVNLTAQLVQRINASRTPPHTFISGSATGYYGHNAEEIITENAPATDTFPSQLCQRWESEALCAKTRVCLLRT
GIVLSKTGGALAKMLPLYRLGLGGKLGSGKQYWAWIALDDMVKGILFLLENHQCQGAFNLVSPNPVRHVEFNNTLANILK
RPAFATVPELLLRFFLGERTQLLLDSQKIVPEKLLAQGFVFDYPELKSALQAILK
>Mature_295_residues
MNILITGATGLIGSHLTSQLIKHAHGVTALVRDPKAAKQKLPASVTLISSLAQYTTLDTFDAVINLAGEPIFEKRWTAQQ
KQRLVESRVNLTAQLVQRINASRTPPHTFISGSATGYYGHNAEEIITENAPATDTFPSQLCQRWESEALCAKTRVCLLRT
GIVLSKTGGALAKMLPLYRLGLGGKLGSGKQYWAWIALDDMVKGILFLLENHQCQGAFNLVSPNPVRHVEFNNTLANILK
RPAFATVPELLLRFFLGERTQLLLDSQKIVPEKLLAQGFVFDYPELKSALQAILK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=300, Percent_Identity=34, Blast_Score=171, Evalue=6e-43,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=51.6778523489933, Blast_Score=306, Evalue=1e-84,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=30.7432432432432, Blast_Score=140, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32471; Mature: 32471

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILITGATGLIGSHLTSQLIKHAHGVTALVRDPKAAKQKLPASVTLISSLAQYTTLDTF
CEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
DAVINLAGEPIFEKRWTAQQKQRLVESRVNLTAQLVQRINASRTPPHTFISGSATGYYGH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC
NAEEIITENAPATDTFPSQLCQRWESEALCAKTRVCLLRTGIVLSKTGGALAKMLPLYRL
CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHH
GLGGKLGSGKQYWAWIALDDMVKGILFLLENHQCQGAFNLVSPNPVRHVEFNNTLANILK
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCHHHHHHHH
RPAFATVPELLLRFFLGERTQLLLDSQKIVPEKLLAQGFVFDYPELKSALQAILK
CCCHHHHHHHHHHHHHCCCHHHHHCCHHCCHHHHHHCCCCCCCHHHHHHHHHHHC
>Mature Secondary Structure
MNILITGATGLIGSHLTSQLIKHAHGVTALVRDPKAAKQKLPASVTLISSLAQYTTLDTF
CEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
DAVINLAGEPIFEKRWTAQQKQRLVESRVNLTAQLVQRINASRTPPHTFISGSATGYYGH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCC
NAEEIITENAPATDTFPSQLCQRWESEALCAKTRVCLLRTGIVLSKTGGALAKMLPLYRL
CHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHH
GLGGKLGSGKQYWAWIALDDMVKGILFLLENHQCQGAFNLVSPNPVRHVEFNNTLANILK
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCHHHHHHHH
RPAFATVPELLLRFFLGERTQLLLDSQKIVPEKLLAQGFVFDYPELKSALQAILK
CCCHHHHHHHHHHHHHCCCHHHHHCCHHCCHHHHHHCCCCCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]