| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is ppc
Identifier: 15602411
GI number: 15602411
Start: 628288
End: 630927
Strand: Reverse
Name: ppc
Synonym: PM0546
Alternate gene names: 15602411
Gene position: 630927-628288 (Counterclockwise)
Preceding gene: 15602412
Following gene: 15602401
Centisome position: 27.95
GC content: 44.05
Gene sequence:
>2640_bases ATGATTCAGCAGTATTCTACTATGCGTAATAATATCAGTATGTTAGGACGTTTTTTAGGCGAAACCATTAGTGATGCACA AGGTAGTGACATTCTGGAGTTAATTGAAAACATCCGTGTCCTTTCACGTAACTCCCGCCATGGGGATGATCAAGCACGTA ATGCGTTATTAAACACCTTAGCGACTATCTCTAACGAAAACATTATCCCTGTGGCTCGCGCATTTAGCCAATTCCTCAAT CTAACCAATATTGCTGAACAATATCAGACGATTTCTCGTCACCACCACGATCATGTTGCTTCTGAGCGCTCTATTTCGGC CCTTTTTAAACGCTTAAAAGCGCAACAGGTGCCCAAAGAAAACGTCATGGAAACCGTGCAAAAATTATTAATTGAACTGG TCTTAACGGCCCATCCCACTGAAGTAACGCGTCGTTCCCTAGTCCATAAACATGTCGAAATTAATAAATGTTTAAGTAAA TTAGAACATACTGATTTAACCGACGCTGAGCGTAAAGCCATTGAACGCCGTTTATTACAGTTGATCGCACAGGCTTGGCA TACCAACGAAATTCGTACCCAACGTCCTACCCCCTTTGAAGAAGCAAAATGGGGATTTGCCGTCATAGAAAACAGTTTAT GGCAGGCGGTGCCTGAATTTCTGCGCCATTTAAATACTAGTGCGGTCGAATATTTTGGTTTTCATTTACCCGTTGAACTC AATCCAATTCGTTTTTCCTCTTGGATGGGAGGCGATCGTGACGGGAATCCTTTTGTCACCGCTGAAGTAACCCGTCAAGT ATTGCGCTTAGCCCGTTGGAAAGCTGCCGATCTCTTTTTAACCGACATTCAAGCCCTATCTGATGAACTTTCGGTAGTAA AATGTACCCCTGAATTCCAAGCCAAATACGGCTCACATGTGGAACCTTACCGCACTGTTGTAAAAGCATTACGGAGCAAG CTTACTGCAACACTAGCCTATTACGATGATCTCTTAGCTAACCGTACACCACGTGTTGCTGAAGAAGACATCATTACGCA AGATGCACAACTTTGGGAACCGCTTTATGATTGCTATCAATCTTTACAAGCCTGTGGCATGCGCATCATTGCTAACGGAT TATTACTCGATTGTTTACGCCGTATTCGTTGCTTTGGCGTAACACTTTCTCGCTTAGATATTCGTCAAGAAAGTACCCGT CATGCAGAAGCGATTGCGGAAATCACACGCTATATCGGTTTAGGCGATTATGCGCAATGGAGTGAGAGTGATAAACAAGC CTTTTTAATCAAAGAACTGAGTTCACGTCGTCCATTATTACCAAGAGAATGGCAACCTTCTGCCGCAACGCAAGAAGTGT TGGATACCTGCCGTGTCATTGCTGAACAGCCTGAAGGGGTAATTTCTTGTTACATTATTTCTATGGCAAAAACTGCCTCA GATGTGCTTGCTGTACATTTATTACTGAAAGAATCTGGCGTGCCTTACCATCTCCCTGTGGTGCCGTTGTTTGAAACCTT AGATGATCTTCGCGCCTCAGAACAAGTCATGTCCGAACTCTTCAATATTGGTTGGTACCGTGGTGTCATCAATAATAAAC AAATGGTGATGATTGGTTATTCGGATTCTGCCAAAGATGCGGGGATGATGGCGGCCTCTTGGGCACAATACTGTGCACAA GAAGCCTTGGTCAACCTCTGCGATAAATGCAATATTGAACTCACTTTATTCCATGGTCGTGGCGGTACCATTGGACGCGG TGGGGCACCAGCCCATGCTGCCTTACTTTCACAGCCACCTCGCTCATTAAAAAATGGATTACGAGTTACAGAGCAAGGGG AAATGATTCGTTTTAAATTGGGTTTACCCGCCGTTGCCGTAGAAAGTTTGGGCTTATATGCCAGTGCAATTTTAGAAGCC AATCTCCTTCCCCCACCAGAACCTAAAGCACAATGGCGGACAGTGATGGATGAGCTGTCCACTATCTCTTGCCAGATTTA CCGCGATGTCGTACGGGGTGAAAAAGATTTCGTGCCTTATTTTCGTGCAGCGACGCCAGAACAAGAATTATCCAAATTAC CTTTAGGCTCGCGCCCCGCTAAACGTAATCCAAATGGCGGTGTAGAAAGCTTACGCGCTATTCCATGGATTTTCGCCTGG ATGCAAAACCGCTTGATGTTACCCGCTTGGTTAGGGGCAGGCGCCTCTCTTCGTCAAGCGATTGAAAAAGGACAAAAAAC TGTTATTGAAGACATGTGTAAAACGTGGCCATTTTTCTCCACGCGTATTGGAATGTTAGAAATGGTCTTTAGTAAAACGG ATACTTGGCTTTCTGAACATTATGATCAACACTTGGTTGACCCCGCACTCTGGTATTTAGGCGAATCTTTGCGTGAGCAA TTAAAACAGGACATTCAAACGGTCTTATCTCTTTCTCACGAAGATCAATTAATGTCCGATTTACCTTGGATTGCAGAATC TATTGCATTACGTAATGTGTATACTGATCCGCTCAATTTGTTACAAGTGGAACTTTTACGCCGGTTAAGACGTAATCCTG ACAATCCAAATCCAGATGTGGAACAAGCGTTAATGATCACCATTACCGGTGTCGCAGCCGGTATGCGTAATACGGGTTAA
Upstream 100 bases:
>100_bases TTATCATTGATCTTTCAAAGTATTTTTGTTTATATCTTGCTTAGTCGAGGTATTTTACCTTTCATTCGTTGAAATCGAGG ATTATTCAGAGAGGCTTTTT
Downstream 100 bases:
>100_bases GTCAAACAAAAAGCCACAGTCTTGTTACTGTGGCTTCTTCTTTTCTCAACCAAGTGCGGTGAAAATCGTTTAGTTTTTAC CGCACTTTTATGTCAGCAAG
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase
Number of amino acids: Translated: 879; Mature: 879
Protein sequence:
>879_residues MIQQYSTMRNNISMLGRFLGETISDAQGSDILELIENIRVLSRNSRHGDDQARNALLNTLATISNENIIPVARAFSQFLN LTNIAEQYQTISRHHHDHVASERSISALFKRLKAQQVPKENVMETVQKLLIELVLTAHPTEVTRRSLVHKHVEINKCLSK LEHTDLTDAERKAIERRLLQLIAQAWHTNEIRTQRPTPFEEAKWGFAVIENSLWQAVPEFLRHLNTSAVEYFGFHLPVEL NPIRFSSWMGGDRDGNPFVTAEVTRQVLRLARWKAADLFLTDIQALSDELSVVKCTPEFQAKYGSHVEPYRTVVKALRSK LTATLAYYDDLLANRTPRVAEEDIITQDAQLWEPLYDCYQSLQACGMRIIANGLLLDCLRRIRCFGVTLSRLDIRQESTR HAEAIAEITRYIGLGDYAQWSESDKQAFLIKELSSRRPLLPREWQPSAATQEVLDTCRVIAEQPEGVISCYIISMAKTAS DVLAVHLLLKESGVPYHLPVVPLFETLDDLRASEQVMSELFNIGWYRGVINNKQMVMIGYSDSAKDAGMMAASWAQYCAQ EALVNLCDKCNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPAVAVESLGLYASAILEA NLLPPPEPKAQWRTVMDELSTISCQIYRDVVRGEKDFVPYFRAATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAW MQNRLMLPAWLGAGASLRQAIEKGQKTVIEDMCKTWPFFSTRIGMLEMVFSKTDTWLSEHYDQHLVDPALWYLGESLREQ LKQDIQTVLSLSHEDQLMSDLPWIAESIALRNVYTDPLNLLQVELLRRLRRNPDNPNPDVEQALMITITGVAAGMRNTG
Sequences:
>Translated_879_residues MIQQYSTMRNNISMLGRFLGETISDAQGSDILELIENIRVLSRNSRHGDDQARNALLNTLATISNENIIPVARAFSQFLN LTNIAEQYQTISRHHHDHVASERSISALFKRLKAQQVPKENVMETVQKLLIELVLTAHPTEVTRRSLVHKHVEINKCLSK LEHTDLTDAERKAIERRLLQLIAQAWHTNEIRTQRPTPFEEAKWGFAVIENSLWQAVPEFLRHLNTSAVEYFGFHLPVEL NPIRFSSWMGGDRDGNPFVTAEVTRQVLRLARWKAADLFLTDIQALSDELSVVKCTPEFQAKYGSHVEPYRTVVKALRSK LTATLAYYDDLLANRTPRVAEEDIITQDAQLWEPLYDCYQSLQACGMRIIANGLLLDCLRRIRCFGVTLSRLDIRQESTR HAEAIAEITRYIGLGDYAQWSESDKQAFLIKELSSRRPLLPREWQPSAATQEVLDTCRVIAEQPEGVISCYIISMAKTAS DVLAVHLLLKESGVPYHLPVVPLFETLDDLRASEQVMSELFNIGWYRGVINNKQMVMIGYSDSAKDAGMMAASWAQYCAQ EALVNLCDKCNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPAVAVESLGLYASAILEA NLLPPPEPKAQWRTVMDELSTISCQIYRDVVRGEKDFVPYFRAATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAW MQNRLMLPAWLGAGASLRQAIEKGQKTVIEDMCKTWPFFSTRIGMLEMVFSKTDTWLSEHYDQHLVDPALWYLGESLREQ LKQDIQTVLSLSHEDQLMSDLPWIAESIALRNVYTDPLNLLQVELLRRLRRNPDNPNPDVEQALMITITGVAAGMRNTG >Mature_879_residues MIQQYSTMRNNISMLGRFLGETISDAQGSDILELIENIRVLSRNSRHGDDQARNALLNTLATISNENIIPVARAFSQFLN LTNIAEQYQTISRHHHDHVASERSISALFKRLKAQQVPKENVMETVQKLLIELVLTAHPTEVTRRSLVHKHVEINKCLSK LEHTDLTDAERKAIERRLLQLIAQAWHTNEIRTQRPTPFEEAKWGFAVIENSLWQAVPEFLRHLNTSAVEYFGFHLPVEL NPIRFSSWMGGDRDGNPFVTAEVTRQVLRLARWKAADLFLTDIQALSDELSVVKCTPEFQAKYGSHVEPYRTVVKALRSK LTATLAYYDDLLANRTPRVAEEDIITQDAQLWEPLYDCYQSLQACGMRIIANGLLLDCLRRIRCFGVTLSRLDIRQESTR HAEAIAEITRYIGLGDYAQWSESDKQAFLIKELSSRRPLLPREWQPSAATQEVLDTCRVIAEQPEGVISCYIISMAKTAS DVLAVHLLLKESGVPYHLPVVPLFETLDDLRASEQVMSELFNIGWYRGVINNKQMVMIGYSDSAKDAGMMAASWAQYCAQ EALVNLCDKCNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPAVAVESLGLYASAILEA NLLPPPEPKAQWRTVMDELSTISCQIYRDVVRGEKDFVPYFRAATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAW MQNRLMLPAWLGAGASLRQAIEKGQKTVIEDMCKTWPFFSTRIGMLEMVFSKTDTWLSEHYDQHLVDPALWYLGESLREQ LKQDIQTVLSLSHEDQLMSDLPWIAESIALRNVYTDPLNLLQVELLRRLRRNPDNPNPDVEQALMITITGVAAGMRNTG
Specific function: Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family
Homologues:
Organism=Escherichia coli, GI1790393, Length=886, Percent_Identity=64.8984198645598, Blast_Score=1177, Evalue=0.0,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): CAPP_PASMU (Q9CN89)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245483.1 - ProteinModelPortal: Q9CN89 - SMR: Q9CN89 - GeneID: 1243893 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0546 - NMPDR: fig|272843.1.peg.546 - HOGENOM: HBG351035 - OMA: AIPWVFG - ProtClustDB: PRK00009 - BioCyc: PMUL272843:PM0546-MONOMER - BRENDA: 4.1.1.31 - HAMAP: MF_00595 - InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 - PRINTS: PR00150
Pfam domain/function: PF00311 PEPcase; SSF51621 Pyrv/PenolPyrv_Kinase_cat
EC number: =4.1.1.31
Molecular weight: Translated: 99398; Mature: 99398
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00781 PEPCASE_1; PS00393 PEPCASE_2
Important sites: ACT_SITE 138-138 ACT_SITE 545-545
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQQYSTMRNNISMLGRFLGETISDAQGSDILELIENIRVLSRNSRHGDDQARNALLNTL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ATISNENIIPVARAFSQFLNLTNIAEQYQTISRHHHDHVASERSISALFKRLKAQQVPKE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NVMETVQKLLIELVLTAHPTEVTRRSLVHKHVEINKCLSKLEHTDLTDAERKAIERRLLQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LIAQAWHTNEIRTQRPTPFEEAKWGFAVIENSLWQAVPEFLRHLNTSAVEYFGFHLPVEL HHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEE NPIRFSSWMGGDRDGNPFVTAEVTRQVLRLARWKAADLFLTDIQALSDELSVVKCTPEFQ CCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHH AKYGSHVEPYRTVVKALRSKLTATLAYYDDLLANRTPRVAEEDIITQDAQLWEPLYDCYQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SLQACGMRIIANGLLLDCLRRIRCFGVTLSRLDIRQESTRHAEAIAEITRYIGLGDYAQW HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC SESDKQAFLIKELSSRRPLLPREWQPSAATQEVLDTCRVIAEQPEGVISCYIISMAKTAS CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DVLAVHLLLKESGVPYHLPVVPLFETLDDLRASEQVMSELFNIGWYRGVINNKQMVMIGY HHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC SDSAKDAGMMAASWAQYCAQEALVNLCDKCNIELTLFHGRGGTIGRGGAPAHAALLSQPP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHCCCC RSLKNGLRVTEQGEMIRFKLGLPAVAVESLGLYASAILEANLLPPPEPKAQWRTVMDELS HHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH TISCQIYRDVVRGEKDFVPYFRAATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAW HHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH MQNRLMLPAWLGAGASLRQAIEKGQKTVIEDMCKTWPFFSTRIGMLEMVFSKTDTWLSEH HHCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YDQHLVDPALWYLGESLREQLKQDIQTVLSLSHEDQLMSDLPWIAESIALRNVYTDPLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH LQVELLRRLRRNPDNPNPDVEQALMITITGVAAGMRNTG HHHHHHHHHHCCCCCCCCCHHHHHHHEEHHHHHCCCCCC >Mature Secondary Structure MIQQYSTMRNNISMLGRFLGETISDAQGSDILELIENIRVLSRNSRHGDDQARNALLNTL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ATISNENIIPVARAFSQFLNLTNIAEQYQTISRHHHDHVASERSISALFKRLKAQQVPKE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NVMETVQKLLIELVLTAHPTEVTRRSLVHKHVEINKCLSKLEHTDLTDAERKAIERRLLQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LIAQAWHTNEIRTQRPTPFEEAKWGFAVIENSLWQAVPEFLRHLNTSAVEYFGFHLPVEL HHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEE NPIRFSSWMGGDRDGNPFVTAEVTRQVLRLARWKAADLFLTDIQALSDELSVVKCTPEFQ CCEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHH AKYGSHVEPYRTVVKALRSKLTATLAYYDDLLANRTPRVAEEDIITQDAQLWEPLYDCYQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SLQACGMRIIANGLLLDCLRRIRCFGVTLSRLDIRQESTRHAEAIAEITRYIGLGDYAQW HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHC SESDKQAFLIKELSSRRPLLPREWQPSAATQEVLDTCRVIAEQPEGVISCYIISMAKTAS CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DVLAVHLLLKESGVPYHLPVVPLFETLDDLRASEQVMSELFNIGWYRGVINNKQMVMIGY HHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC SDSAKDAGMMAASWAQYCAQEALVNLCDKCNIELTLFHGRGGTIGRGGAPAHAALLSQPP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHCCCC RSLKNGLRVTEQGEMIRFKLGLPAVAVESLGLYASAILEANLLPPPEPKAQWRTVMDELS HHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH TISCQIYRDVVRGEKDFVPYFRAATPEQELSKLPLGSRPAKRNPNGGVESLRAIPWIFAW HHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH MQNRLMLPAWLGAGASLRQAIEKGQKTVIEDMCKTWPFFSTRIGMLEMVFSKTDTWLSEH HHCCEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YDQHLVDPALWYLGESLREQLKQDIQTVLSLSHEDQLMSDLPWIAESIALRNVYTDPLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH LQVELLRRLRRNPDNPNPDVEQALMITITGVAAGMRNTG HHHHHHHHHHCCCCCCCCCHHHHHHHEEHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100