| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is pstS [H]
Identifier: 15602301
GI number: 15602301
Start: 511097
End: 512308
Strand: Reverse
Name: pstS [H]
Synonym: PM0436
Alternate gene names: 15602301
Gene position: 512308-511097 (Counterclockwise)
Preceding gene: 15602308
Following gene: 15602300
Centisome position: 22.69
GC content: 43.23
Gene sequence:
>1212_bases TTGGCTATAAAACAATCCACTCGCCTTGCCTTTTTCAAAAAATCTGTACAAAAACAACCGCACTTTTTGCACTGCAAACT GTCATTCGCCTGTCATCAAACTGTCATATTTGTTCATTACAATCACTTTCGCTACCACATGGTAGTGATTGAAAAGACAC TCAAAGGAGTAACATCTATGACAAAACGTGCAATGCTTTTGGCTATTCTATTCAGTACATTTGCTTTGACGACGCAGGCA CAAACCATTACTGGCGCGGGCGCTTCTTTTCCTTATCCAATCTATGCCAAATGGGCATCCATGTATGAAAAACAAACAGG TAACAAAGTCAACTATCAATCAATTGGCTCGGGGGGCGGTCAGCAACAAATTATCGCCAAAACCATTGATTTTGGTGCCT CAGATGATCCGATGAAAGCAGAACTTTTAGCACAACATCAATTATTACAATTTCCAGCCATTATCGGTGGCACAGTGCCT GTCGTGAATTTACCAGAAATCACCGCCGGACAGCTTAAACTTTCTGGTGAAGTTCTCGCCGATATTTTCTTAGGCAAAAT TAAAAAGTGGAATGATCCCGCTATCGCCAAATTAAACCAAGGGGCTAATTTACCCGATAAAGCCATTATCGTCGTACATC GTTCTGACGGTTCAGGCACCACATTCGGTTGGACTAATTATCTTTCTAAAGTATCGACTGAATGGAAAGAAACAGTCGGT CAAGGTAAATCAGTCAAATGGCCTACGGGACAAGGCGGCAAAGGTAACGAAGGCGTGGCTGCTTATGTCAGCAAAATCAA ATATTCGATTGGTTATGTGGAATATGCGTACGCGAAACAAAACCAGCTCGCTTGGGCGTCATTACAAAATAAAGCCGGGC AATTTGTACAGCCCTCAGCAGAAAGTTTTATGGCAGCTGCCGCCAATGCACAATGGGAAAGTGCGGTCGGTATGGGCGTC ATTTTAACCAATGAAGAAGGCGATACATCTTGGCCAGTCACCGCAGCAAGTTTCATCTTATTGCATAAGCATGCAGAAAA GCCAGAAATCACCAAAGCTGTCTTTGATTTCTTTGACTGGGCATTCAAGCAAGGCAAAGTCGCAGCAACCGAGCTTGATT ATGTGCCTCTGCCTGAGGAAGTTATTCAGAAAATTCAAGCGCAATGGAAAACCGAGGTGAAGTCCAGTGATGGCAAAACA CTTTGGCAATAA
Upstream 100 bases:
>100_bases TTCCCATAAACTTCTTCTATTGCTTCGATGTTTTTTCAATATGGGGCATTATACACAAGTTTCAAGGCGAATTTGGTAGA AAAAATGAATTGAATCAATA
Downstream 100 bases:
>100_bases ATAAACGCAGAGGGCAGAAACACCGGCTGCCCTCTCTATACAATAATGACAAGAGGGTGACCATGCTAAGACGCAAAACC CAAGCGGAAACGAACCGCTT
Product: hypothetical protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MAIKQSTRLAFFKKSVQKQPHFLHCKLSFACHQTVIFVHYNHFRYHMVVIEKTLKGVTSMTKRAMLLAILFSTFALTTQA QTITGAGASFPYPIYAKWASMYEKQTGNKVNYQSIGSGGGQQQIIAKTIDFGASDDPMKAELLAQHQLLQFPAIIGGTVP VVNLPEITAGQLKLSGEVLADIFLGKIKKWNDPAIAKLNQGANLPDKAIIVVHRSDGSGTTFGWTNYLSKVSTEWKETVG QGKSVKWPTGQGGKGNEGVAAYVSKIKYSIGYVEYAYAKQNQLAWASLQNKAGQFVQPSAESFMAAAANAQWESAVGMGV ILTNEEGDTSWPVTAASFILLHKHAEKPEITKAVFDFFDWAFKQGKVAATELDYVPLPEEVIQKIQAQWKTEVKSSDGKT LWQ
Sequences:
>Translated_403_residues MAIKQSTRLAFFKKSVQKQPHFLHCKLSFACHQTVIFVHYNHFRYHMVVIEKTLKGVTSMTKRAMLLAILFSTFALTTQA QTITGAGASFPYPIYAKWASMYEKQTGNKVNYQSIGSGGGQQQIIAKTIDFGASDDPMKAELLAQHQLLQFPAIIGGTVP VVNLPEITAGQLKLSGEVLADIFLGKIKKWNDPAIAKLNQGANLPDKAIIVVHRSDGSGTTFGWTNYLSKVSTEWKETVG QGKSVKWPTGQGGKGNEGVAAYVSKIKYSIGYVEYAYAKQNQLAWASLQNKAGQFVQPSAESFMAAAANAQWESAVGMGV ILTNEEGDTSWPVTAASFILLHKHAEKPEITKAVFDFFDWAFKQGKVAATELDYVPLPEEVIQKIQAQWKTEVKSSDGKT LWQ >Mature_402_residues AIKQSTRLAFFKKSVQKQPHFLHCKLSFACHQTVIFVHYNHFRYHMVVIEKTLKGVTSMTKRAMLLAILFSTFALTTQAQ TITGAGASFPYPIYAKWASMYEKQTGNKVNYQSIGSGGGQQQIIAKTIDFGASDDPMKAELLAQHQLLQFPAIIGGTVPV VNLPEITAGQLKLSGEVLADIFLGKIKKWNDPAIAKLNQGANLPDKAIIVVHRSDGSGTTFGWTNYLSKVSTEWKETVGQ GKSVKWPTGQGGKGNEGVAAYVSKIKYSIGYVEYAYAKQNQLAWASLQNKAGQFVQPSAESFMAAAANAQWESAVGMGVI LTNEEGDTSWPVTAASFILLHKHAEKPEITKAVFDFFDWAFKQGKVAATELDYVPLPEEVIQKIQAQWKTEVKSSDGKTL WQ
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=332, Percent_Identity=54.5180722891566, Blast_Score=375, Evalue=1e-105,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 44336; Mature: 44205
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKQSTRLAFFKKSVQKQPHFLHCKLSFACHQTVIFVHYNHFRYHMVVIEKTLKGVTSM CCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECEEEEEEEECCEEEEEEEHHHHHHHHHHH TKRAMLLAILFSTFALTTQAQTITGAGASFPYPIYAKWASMYEKQTGNKVNYQSIGSGGG HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCC QQQIIAKTIDFGASDDPMKAELLAQHQLLQFPAIIGGTVPVVNLPEITAGQLKLSGEVLA CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECHHHHH DIFLGKIKKWNDPAIAKLNQGANLPDKAIIVVHRSDGSGTTFGWTNYLSKVSTEWKETVG HHHHHHHCCCCCHHHHEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC QGKSVKWPTGQGGKGNEGVAAYVSKIKYSIGYVEYAYAKQNQLAWASLQNKAGQFVQPSA CCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCCH ESFMAAAANAQWESAVGMGVILTNEEGDTSWPVTAASFILLHKHAEKPEITKAVFDFFDW HHHHHHHCCCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH AFKQGKVAATELDYVPLPEEVIQKIQAQWKTEVKSSDGKTLWQ HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure AIKQSTRLAFFKKSVQKQPHFLHCKLSFACHQTVIFVHYNHFRYHMVVIEKTLKGVTSM CCCCHHHHHHHHHHHHCCCCEEEEEEEEEECEEEEEEEECCEEEEEEEHHHHHHHHHHH TKRAMLLAILFSTFALTTQAQTITGAGASFPYPIYAKWASMYEKQTGNKVNYQSIGSGGG HHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCC QQQIIAKTIDFGASDDPMKAELLAQHQLLQFPAIIGGTVPVVNLPEITAGQLKLSGEVLA CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEECHHHHH DIFLGKIKKWNDPAIAKLNQGANLPDKAIIVVHRSDGSGTTFGWTNYLSKVSTEWKETVG HHHHHHHCCCCCHHHHEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC QGKSVKWPTGQGGKGNEGVAAYVSKIKYSIGYVEYAYAKQNQLAWASLQNKAGQFVQPSA CCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCCH ESFMAAAANAQWESAVGMGVILTNEEGDTSWPVTAASFILLHKHAEKPEITKAVFDFFDW HHHHHHHCCCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH AFKQGKVAATELDYVPLPEEVIQKIQAQWKTEVKSSDGKTLWQ HHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]