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The map label for this gene is rnfE [H]

Identifier: 15602247

GI number: 15602247

Start: 450685

End: 451413

Strand: Reverse

Name: rnfE [H]

Synonym: PM0382

Alternate gene names: 15602247

Gene position: 451413-450685 (Counterclockwise)

Preceding gene: 15602248

Following gene: 15602246

Centisome position: 20.0

GC content: 42.11

Gene sequence:

>729_bases
ATGAACGACACTTTCGCAAAACAGACCGCACTTTCTGACGCTAAAGACGATGTCATGGACCAGCAATCTACATTAGCGAA
TACATCCACTCCGTCGGTCTGGAAAACACTTTTCTGGCAAGGAGTATGGAAAAATAATTCAACCCTTGTGCAACTCTTGG
GCTTATGTCCATTATTAGCTGTATCCAACAGTGTCACAAATGCGTTGGGGTTAGGCATTGCAACGCTATTCGTGCTGATT
TGTAGTAACACAGTAGTCTCTTTATTCCGCAAACAAATTCCGCACGAAATCCGTATTCCAATTTATGTGATGATTATTGC
CACGACCGTCACGGTGGTGCAATTACTGATGAATGCCTATACTTATTCACTCTATCAATCCTTGGGTATTTTTATTCCAC
TGATCGTCACTAACTGTATTGTGATTGGGCGTGCTGAAGCCTTTGCTTCAAAAAATCCGCTTTCCCATGCGATGTTTGAT
GGCTTTGCCATGGGGTTAGGCATGTGTTTAAGCTTAGTCTTTTTAGGGGCAATCCGTGAAATTCTCGGTAATGGCACCTT
GTTTGACGGCATTGAGCATTTACTTGGTGATTGGGCAAAAGGATTGCGTATTGAATTATTTCATCTCGATAGCCATTTCT
TGTTGGCGATTTTACCACCGGGCGCCTTTATTGGTTTAGGACTCATTTTAGCCATTAAAAATGTCATTGATCAGCGTAAC
AAAGCATGA

Upstream 100 bases:

>100_bases
ACCAGTTTGCGGGCGCCACTATCACGCCACGCGCTGTAGTGAATCAAGTAAAACAATCGGCATTAAGCCTGTTAGATGAA
CTCAATCAAGAGAATTAATC

Downstream 100 bases:

>100_bases
ATAAACAAAAACGAATTGAAATTTTAACACGCCTACGTGATCACAATCCGCATCCAACCACCGAACTCAATTACAGTTCG
CCTTTCGAGTTGTTAATTGC

Product: electron transport complex RsxE subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNDTFAKQTALSDAKDDVMDQQSTLANTSTPSVWKTLFWQGVWKNNSTLVQLLGLCPLLAVSNSVTNALGLGIATLFVLI
CSNTVVSLFRKQIPHEIRIPIYVMIIATTVTVVQLLMNAYTYSLYQSLGIFIPLIVTNCIVIGRAEAFASKNPLSHAMFD
GFAMGLGMCLSLVFLGAIREILGNGTLFDGIEHLLGDWAKGLRIELFHLDSHFLLAILPPGAFIGLGLILAIKNVIDQRN
KA

Sequences:

>Translated_242_residues
MNDTFAKQTALSDAKDDVMDQQSTLANTSTPSVWKTLFWQGVWKNNSTLVQLLGLCPLLAVSNSVTNALGLGIATLFVLI
CSNTVVSLFRKQIPHEIRIPIYVMIIATTVTVVQLLMNAYTYSLYQSLGIFIPLIVTNCIVIGRAEAFASKNPLSHAMFD
GFAMGLGMCLSLVFLGAIREILGNGTLFDGIEHLLGDWAKGLRIELFHLDSHFLLAILPPGAFIGLGLILAIKNVIDQRN
KA
>Mature_242_residues
MNDTFAKQTALSDAKDDVMDQQSTLANTSTPSVWKTLFWQGVWKNNSTLVQLLGLCPLLAVSNSVTNALGLGIATLFVLI
CSNTVVSLFRKQIPHEIRIPIYVMIIATTVTVVQLLMNAYTYSLYQSLGIFIPLIVTNCIVIGRAEAFASKNPLSHAMFD
GFAMGLGMCLSLVFLGAIREILGNGTLFDGIEHLLGDWAKGLRIELFHLDSHFLLAILPPGAFIGLGLILAIKNVIDQRN
KA

Specific function: May be part of a membrane complex involved in electron transport [H]

COG id: COG4660

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787919, Length=207, Percent_Identity=64.7342995169082, Blast_Score=259, Evalue=1e-70,
Organism=Escherichia coli, GI1787914, Length=155, Percent_Identity=36.7741935483871, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR010968 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 26381; Mature: 26381

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTFAKQTALSDAKDDVMDQQSTLANTSTPSVWKTLFWQGVWKNNSTLVQLLGLCPLLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VSNSVTNALGLGIATLFVLICSNTVVSLFRKQIPHEIRIPIYVMIIATTVTVVQLLMNAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHH
TYSLYQSLGIFIPLIVTNCIVIGRAEAFASKNPLSHAMFDGFAMGLGMCLSLVFLGAIRE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGNGTLFDGIEHLLGDWAKGLRIELFHLDSHFLLAILPPGAFIGLGLILAIKNVIDQRN
HHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
KA
CC
>Mature Secondary Structure
MNDTFAKQTALSDAKDDVMDQQSTLANTSTPSVWKTLFWQGVWKNNSTLVQLLGLCPLLA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VSNSVTNALGLGIATLFVLICSNTVVSLFRKQIPHEIRIPIYVMIIATTVTVVQLLMNAY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHH
TYSLYQSLGIFIPLIVTNCIVIGRAEAFASKNPLSHAMFDGFAMGLGMCLSLVFLGAIRE
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGNGTLFDGIEHLLGDWAKGLRIELFHLDSHFLLAILPPGAFIGLGLILAIKNVIDQRN
HHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCC
KA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]