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The map label for this gene is ycbK [H]

Identifier: 15602136

GI number: 15602136

Start: 308092

End: 308652

Strand: Direct

Name: ycbK [H]

Synonym: PM0271

Alternate gene names: 15602136

Gene position: 308092-308652 (Clockwise)

Preceding gene: 15602135

Following gene: 15602137

Centisome position: 13.65

GC content: 39.57

Gene sequence:

>561_bases
ATGAATAGTATTAACCATACTCGCCGTAAATGGTTATCTTTAGGTGGGATCGTATTAGGCGCATCTTTGTTACCGAGTCC
TTTGTTGGCAGCTGTTTCGACACCTAAACCACGTATTTTACGTTTCAGAAACATTAATACAGGGGAGAAATTTAGTGCAG
AGTTTTTGCCAAGTAAAGGCTTTTCCTCTGTCGCACTTAAGAAATTGGATTATTTAATGCGTGATAAACGTAATAATCAT
ATGCATAGAATGGATCCAAAACTGTTTTTAAAATTTTATCGTTTACAAGCCAGCTTAGGTTTACGTAATACTGAAATCCA
AATTATTTGTGGTTATCGCTCACCAGTGAGTAATGCGGCGATGCATCGTAGAAGCCGTGGTGTAGCCAGTAACAGTTATC
ATACACGTGGACAAGCGATTGATTTCCGTATTGATGGCGTACCATTAGCAAAACTTCGTCAAGCAGCAGAAAAACTGAAT
AATGGTGGGGTAGGATATTATCCGCGCAGTAATTTTATTCATGTGGATACTGGTCCTGTTCGTACATGGCGTGGCAGTTG
A

Upstream 100 bases:

>100_bases
GGGGGAAATAGGTAAAATAAGTGCGTTTTGTTCTTTTTGAGAACGAATGTTAATTACGTTGGTCAAACTAAGCATGAAAT
AACATAGAGAAATTGACATA

Downstream 100 bases:

>100_bases
TAAAATAAAACTTTTCCGTATTGAACCGCACTTTTGTGCGGTTTTCTTCTTATTTAGTCATAGAGAGATAGCATGAATAT
TGAAATTATTCCGGTCACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNSINHTRRKWLSLGGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKGFSSVALKKLDYLMRDKRNNH
MHRMDPKLFLKFYRLQASLGLRNTEIQIICGYRSPVSNAAMHRRSRGVASNSYHTRGQAIDFRIDGVPLAKLRQAAEKLN
NGGVGYYPRSNFIHVDTGPVRTWRGS

Sequences:

>Translated_186_residues
MNSINHTRRKWLSLGGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKGFSSVALKKLDYLMRDKRNNH
MHRMDPKLFLKFYRLQASLGLRNTEIQIICGYRSPVSNAAMHRRSRGVASNSYHTRGQAIDFRIDGVPLAKLRQAAEKLN
NGGVGYYPRSNFIHVDTGPVRTWRGS
>Mature_186_residues
MNSINHTRRKWLSLGGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKGFSSVALKKLDYLMRDKRNNH
MHRMDPKLFLKFYRLQASLGLRNTEIQIICGYRSPVSNAAMHRRSRGVASNSYHTRGQAIDFRIDGVPLAKLRQAAEKLN
NGGVGYYPRSNFIHVDTGPVRTWRGS

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=183, Percent_Identity=51.3661202185792, Blast_Score=201, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20978; Mature: 20978

Theoretical pI: Translated: 11.78; Mature: 11.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSINHTRRKWLSLGGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCC
FSSVALKKLDYLMRDKRNNHMHRMDPKLFLKFYRLQASLGLRNTEIQIICGYRSPVSNAA
CHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH
MHRRSRGVASNSYHTRGQAIDFRIDGVPLAKLRQAAEKLNNGGVGYYPRSNFIHVDTGPV
HHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
RTWRGS
CCCCCC
>Mature Secondary Structure
MNSINHTRRKWLSLGGIVLGASLLPSPLLAAVSTPKPRILRFRNINTGEKFSAEFLPSKG
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCC
FSSVALKKLDYLMRDKRNNHMHRMDPKLFLKFYRLQASLGLRNTEIQIICGYRSPVSNAA
CHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH
MHRRSRGVASNSYHTRGQAIDFRIDGVPLAKLRQAAEKLNNGGVGYYPRSNFIHVDTGPV
HHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCC
RTWRGS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]