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The map label for this gene is hofC [H]

Identifier: 15601951

GI number: 15601951

Start: 112857

End: 113999

Strand: Direct

Name: hofC [H]

Synonym: PM0086

Alternate gene names: 15601951

Gene position: 112857-113999 (Clockwise)

Preceding gene: 15601950

Following gene: 15601952

Centisome position: 5.0

GC content: 38.23

Gene sequence:

>1143_bases
GTGGCGGAAAGTAAAGAGATAGCACAGCAATCTTTATTACTTCAGGGCGTTCACCAACTGCATTTACAACGAAATTGGCA
GCTTTCTATGCAACCTAAATATACCGAGATTTGTGATCTGTTAATGCAATTAGCGATGCTATTACAAGCATCGGTTCCCT
TGAAGGAAAGTTTACAGCTATTACAGCGACATGCTAGCAATATTGAGTTAACGCAATGGTTACGTCAGTTACTCTGTTCA
CTCGAAAGTGGATTTTCTTTTTCAACCGCGCTAGCTACACAAGATCGTTACTTAACAAAACAGGAATACCAATTAATTTC
TGTTGGTGAATCGACAGGGAAACTACCGCTTGTTTGTGCACAATTAGCGAAACAACGTCAACAATCATTAGGGTTACGAC
GCAAAGTTCAGAAAATGTTGTTTTATCCAATGTTAGTGCTTGTTGTGACATTGATCTTAACGTCGTTGTTACTGCTGTTT
ATTGTGCCACAGTTTGCTGAGATTTATGCAAATCAACCTTTACCTGCGTTTACTGTGTTGTTATTGAATGTATCGGCAGG
GTTACGTGGTTATGCTTTTCAATTGAGTCTCCTATTAATTTTCGGCTTTATTTTTTTGATGTTAAATGCGAGACAGCGAG
TTGGACTATATCGATTAAAAAATTGTCTGCTTCATTTCCTTCCAATCTTTAAGAAAATTGCGCAACATCACGAGCTTATT
CATTTTTGTCGTCATTTACATCTTATGCTCAGCTCGGGCATGCCTTTGCAACAGGCATTGCAGACTTTTTTACCTACACA
GAAAAGTGGTATAGCAAAACACGAGCTTACCGAGATGCGACTGGCTGAAGAAGTACAGTTAATGTTAAAGGGGATTGCTC
AAGGTTATAGGTTTTCTGAGGTTATCGGCTCTAACTTATTTCCGGAAATGGCACAACAGATGTTACATGTTGGTGAACAA
ACAGGGCGATTAAGTGAAATGTTGCAGTATATAGCAGAAAGTTATCAACAAAAGTTAGAGCACCAACTTGATTTACTTTC
ACAATTATTGGAACCCTGTTTAATGTTAGTGATTGGTTCGATTATTGGTGTCATTTTATTGGGTATGTATTTACCGATGT
TTAATATGGGGGCATTGGTGTAA

Upstream 100 bases:

>100_bases
ACAATGAAGTACAACGTGTATTAGGTGAATGATGAAAAAATTAAAAATGTTTCGTTGGAAAGGAATAAATCGATTACAAC
AAATACAAAAAGGAGTTATT

Downstream 100 bases:

>100_bases
TGAGATTATTTCTGATAGTAGCTGGTGGTTTGATGGGAGTATGGTGTCGTTATTATCTTCTGCATTTTCGTGATTGGGTC
GCTAAAGATGTTTATGTGGC

Product: HofC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MAESKEIAQQSLLLQGVHQLHLQRNWQLSMQPKYTEICDLLMQLAMLLQASVPLKESLQLLQRHASNIELTQWLRQLLCS
LESGFSFSTALATQDRYLTKQEYQLISVGESTGKLPLVCAQLAKQRQQSLGLRRKVQKMLFYPMLVLVVTLILTSLLLLF
IVPQFAEIYANQPLPAFTVLLLNVSAGLRGYAFQLSLLLIFGFIFLMLNARQRVGLYRLKNCLLHFLPIFKKIAQHHELI
HFCRHLHLMLSSGMPLQQALQTFLPTQKSGIAKHELTEMRLAEEVQLMLKGIAQGYRFSEVIGSNLFPEMAQQMLHVGEQ
TGRLSEMLQYIAESYQQKLEHQLDLLSQLLEPCLMLVIGSIIGVILLGMYLPMFNMGALV

Sequences:

>Translated_380_residues
MAESKEIAQQSLLLQGVHQLHLQRNWQLSMQPKYTEICDLLMQLAMLLQASVPLKESLQLLQRHASNIELTQWLRQLLCS
LESGFSFSTALATQDRYLTKQEYQLISVGESTGKLPLVCAQLAKQRQQSLGLRRKVQKMLFYPMLVLVVTLILTSLLLLF
IVPQFAEIYANQPLPAFTVLLLNVSAGLRGYAFQLSLLLIFGFIFLMLNARQRVGLYRLKNCLLHFLPIFKKIAQHHELI
HFCRHLHLMLSSGMPLQQALQTFLPTQKSGIAKHELTEMRLAEEVQLMLKGIAQGYRFSEVIGSNLFPEMAQQMLHVGEQ
TGRLSEMLQYIAESYQQKLEHQLDLLSQLLEPCLMLVIGSIIGVILLGMYLPMFNMGALV
>Mature_379_residues
AESKEIAQQSLLLQGVHQLHLQRNWQLSMQPKYTEICDLLMQLAMLLQASVPLKESLQLLQRHASNIELTQWLRQLLCSL
ESGFSFSTALATQDRYLTKQEYQLISVGESTGKLPLVCAQLAKQRQQSLGLRRKVQKMLFYPMLVLVVTLILTSLLLLFI
VPQFAEIYANQPLPAFTVLLLNVSAGLRGYAFQLSLLLIFGFIFLMLNARQRVGLYRLKNCLLHFLPIFKKIAQHHELIH
FCRHLHLMLSSGMPLQQALQTFLPTQKSGIAKHELTEMRLAEEVQLMLKGIAQGYRFSEVIGSNLFPEMAQQMLHVGEQT
GRLSEMLQYIAESYQQKLEHQLDLLSQLLEPCLMLVIGSIIGVILLGMYLPMFNMGALV

Specific function: Unknown

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1786295, Length=388, Percent_Identity=29.639175257732, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI1789724, Length=353, Percent_Identity=23.2294617563739, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43305; Mature: 43173

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESKEIAQQSLLLQGVHQLHLQRNWQLSMQPKYTEICDLLMQLAMLLQASVPLKESLQL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LQRHASNIELTQWLRQLLCSLESGFSFSTALATQDRYLTKQEYQLISVGESTGKLPLVCA
HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
QLAKQRQQSLGLRRKVQKMLFYPMLVLVVTLILTSLLLLFIVPQFAEIYANQPLPAFTVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLNVSAGLRGYAFQLSLLLIFGFIFLMLNARQRVGLYRLKNCLLHFLPIFKKIAQHHELI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFCRHLHLMLSSGMPLQQALQTFLPTQKSGIAKHELTEMRLAEEVQLMLKGIAQGYRFSE
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VIGSNLFPEMAQQMLHVGEQTGRLSEMLQYIAESYQQKLEHQLDLLSQLLEPCLMLVIGS
HHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGVILLGMYLPMFNMGALV
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AESKEIAQQSLLLQGVHQLHLQRNWQLSMQPKYTEICDLLMQLAMLLQASVPLKESLQL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH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HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]