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The map label for this gene is ybgI [C]

Identifier: 15594813

GI number: 15594813

Start: 488226

End: 488972

Strand: Direct

Name: ybgI [C]

Synonym: BB0468

Alternate gene names: 15594813

Gene position: 488226-488972 (Clockwise)

Preceding gene: 15594812

Following gene: 15594814

Centisome position: 53.61

GC content: 28.25

Gene sequence:

>747_bases
TTGAATGTAAGAGATTTGTCTTTTAAGCTTAATTCAATTTTTGATATAAATAAGTATGAGCATATTGATAAAAATTTAAA
TGGGCTTCAAGTGGGGAATATTAATGCTAAGGTTAACAAGGTTGCCTTTGCTGTTGATGCTAGCTTTTCAACTTTAAAAG
AAGCAAAAGGAAATGATTTTTTAATTACTCATCACGGTATTTTTTGGTCAAAAAAAGAGCGCATTGTTTCTAATATGTAT
GATAAAACGAAATTTTTAATTGAAAATAATTTAGCTCTTTATTCGGTGCACTTGCCTATGGATGCTCATTCTGTTTATTC
GCACAGCAAAGTGTTCTCAGATTTTTTAGGATTAAAAAATTCTTTTGCTTTTGCAAATTATGGCGGAGTTAATCTAGGGA
TTATTGCTGATTCTGTTTTTAGCTTTTCTGAAATTTTAGAAAAAATCAAAAAGGAAAATAAACATATTCTTTTTTCGAAA
AAGTTCAAAGAATCGGTGAATAAGGTTGCAATTGTTAGTGGTTCTGGATACTCTTTTTTTGAAGAAGCTTTATGTCATGA
TGTAGATTTGTTTATAACCGGCGACACTTCTCATCAAATATATTCTTTGGCAGAAGAATTCGGTGTGAATTTGATTTTTG
CAGGTCATTATTTTACTGAAACTTTTGGTTTAATTAAATTAATGGAAGATTTCAAAATTCAAGAAGATTTAGAGGTTAAA
TTTATTTGTAAAAATACTAATTTATAA

Upstream 100 bases:

>100_bases
ATTTATAATTCAAAGCTTTGTACGTATTGTTTGAAAAATCTTTATTCTTATAGAAGATTAAGAGAAAGTCAAAGTTATGC
TTTAATTTGGAGAATTTAAT

Downstream 100 bases:

>100_bases
GGATTTTTGTATGAGCGCTAAAAGTAAGCAATATTTCAATATTTTTGTATTTATTATTAGTTTGATTTTTTTTGATCAAC
TTTCTAAGTATTTGGTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNVRDLSFKLNSIFDINKYEHIDKNLNGLQVGNINAKVNKVAFAVDASFSTLKEAKGNDFLITHHGIFWSKKERIVSNMY
DKTKFLIENNLALYSVHLPMDAHSVYSHSKVFSDFLGLKNSFAFANYGGVNLGIIADSVFSFSEILEKIKKENKHILFSK
KFKESVNKVAIVSGSGYSFFEEALCHDVDLFITGDTSHQIYSLAEEFGVNLIFAGHYFTETFGLIKLMEDFKIQEDLEVK
FICKNTNL

Sequences:

>Translated_248_residues
MNVRDLSFKLNSIFDINKYEHIDKNLNGLQVGNINAKVNKVAFAVDASFSTLKEAKGNDFLITHHGIFWSKKERIVSNMY
DKTKFLIENNLALYSVHLPMDAHSVYSHSKVFSDFLGLKNSFAFANYGGVNLGIIADSVFSFSEILEKIKKENKHILFSK
KFKESVNKVAIVSGSGYSFFEEALCHDVDLFITGDTSHQIYSLAEEFGVNLIFAGHYFTETFGLIKLMEDFKIQEDLEVK
FICKNTNL
>Mature_248_residues
MNVRDLSFKLNSIFDINKYEHIDKNLNGLQVGNINAKVNKVAFAVDASFSTLKEAKGNDFLITHHGIFWSKKERIVSNMY
DKTKFLIENNLALYSVHLPMDAHSVYSHSKVFSDFLGLKNSFAFANYGGVNLGIIADSVFSFSEILEKIKKENKHILFSK
KFKESVNKVAIVSGSGYSFFEEALCHDVDLFITGDTSHQIYSLAEEFGVNLIFAGHYFTETFGLIKLMEDFKIQEDLEVK
FICKNTNL

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=226, Percent_Identity=32.3008849557522, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y468_BORBU (O51424)

Other databases:

- EMBL:   AE000783
- PIR:   C70158
- RefSeq:   NP_212602.1
- ProteinModelPortal:   O51424
- SMR:   O51424
- EnsemblBacteria:   EBBORT00000008857
- GeneID:   1195314
- GenomeReviews:   AE000783_GR
- KEGG:   bbu:BB0468
- NMPDR:   fig|224326.1.peg.852
- TIGR:   BB_0468
- GeneTree:   EBGT00050000007488
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- PhylomeDB:   O51424
- ProtClustDB:   CLSK507618
- BioCyc:   BBUR224326:BB_0468-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 28171; Mature: 28171

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRDLSFKLNSIFDINKYEHIDKNLNGLQVGNINAKVNKVAFAVDASFSTLKEAKGNDF
CCCCCEEEEECCEEECCHHHHHCCCCCCEEECCCCCEEEEEEEEEECCHHHHHHCCCCEE
LITHHGIFWSKKERIVSNMYDKTKFLIENNLALYSVHLPMDAHSVYSHSKVFSDFLGLKN
EEEECCEEECHHHHHHHHHHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCCC
SFAFANYGGVNLGIIADSVFSFSEILEKIKKENKHILFSKKFKESVNKVAIVSGSGYSFF
CCEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCEEEEEECCCHHHH
EEALCHDVDLFITGDTSHQIYSLAEEFGVNLIFAGHYFTETFGLIKLMEDFKIQEDLEVK
HHHHHCCCEEEEECCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEE
FICKNTNL
EEEECCCC
>Mature Secondary Structure
MNVRDLSFKLNSIFDINKYEHIDKNLNGLQVGNINAKVNKVAFAVDASFSTLKEAKGNDF
CCCCCEEEEECCEEECCHHHHHCCCCCCEEECCCCCEEEEEEEEEECCHHHHHHCCCCEE
LITHHGIFWSKKERIVSNMYDKTKFLIENNLALYSVHLPMDAHSVYSHSKVFSDFLGLKN
EEEECCEEECHHHHHHHHHHHHHHEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHCCCC
SFAFANYGGVNLGIIADSVFSFSEILEKIKKENKHILFSKKFKESVNKVAIVSGSGYSFF
CCEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCEEEEEECCCHHHH
EEALCHDVDLFITGDTSHQIYSLAEEFGVNLIFAGHYFTETFGLIKLMEDFKIQEDLEVK
HHHHHCCCEEEEECCCCHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEE
FICKNTNL
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685