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The map label for this gene is jag [H]

Identifier: 15594788

GI number: 15594788

Start: 462045

End: 462773

Strand: Direct

Name: jag [H]

Synonym: BB0443

Alternate gene names: 15594788

Gene position: 462045-462773 (Clockwise)

Preceding gene: 15594787

Following gene: 15594789

Centisome position: 50.73

GC content: 29.77

Gene sequence:

>729_bases
ATGAGCTATGAATTTTACGGAAAAACCGAGCAAGAAGCAATAAAGAAAGCAATGAGAGATCTAGAATTAAAAGAAGGCGA
GTTTGATGTAGAAATTTTAGATAAAGAAAGGGTTGGATTTTTATTTAAGAAAGAAATGATTAAAATACGGGTTTCTCCTC
ATGCAAAGGAGGTTAAAAAAGACGATTTTGAAATTAAAATTGGTGATGAAATTTGTGATAAAATTTTAGAATTTGTAAAA
GAAATGCTAATTAAAATGGGATATTCTGTACATTTGACAATAGAGCCCAAAGAAGGGGGATATGTTAAGATTTCTATTGA
AACAGATAGTCCAAATATTTTGATTGGACGAGAGGGTAAAAATTTAGATTCTTTGCAGCTTTTAACAAATGTTTATGCCT
CTAAGCTTATTGGTGAAAATGGGGCTTTTAATAGGGTTATATTGGATATTGGAGATTATAGAGAACGGTTTAAATCTAGG
TTTATTAATTTAGCAATAAATTCTTTTCATAAAGTCAAAAGAACCAGGCGCTCTATTTTGTTGCCATCAATGAATCCTTT
TGAAAGAAGGATTGTTCATACAACTTTAAATCGTTATAGTGACATAAAAACTGAAAGTGAGGGAGATGGAAATATAAAAA
GAATAAGAGTCTCTTATGTTAGAAATAATAGGTATGGTATCAACAATTCTCGTGGTTATCAGAAAAGAGATATTGGTTTT
AAAAAATAG

Upstream 100 bases:

>100_bases
TATGCCATCAGGGCTTTTAATATATTGGATTACAACAAATATTTTTACTATTTTGCAGCAATACTATATAAAGATGCATT
TGTCTTAAAGGGGGAATAAT

Downstream 100 bases:

>100_bases
ATTAATGGGCTTGCTTTGTATTGAATTTTAAAGAGGAATAATAGTATGAAGATTTTTTTAACCGGAATTGCAGGGTTTAT
TGGATTTCATGTAGCTAAAA

Product: spoIIIJ-associtated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHAKEVKKDDFEIKIGDEICDKILEFVK
EMLIKMGYSVHLTIEPKEGGYVKISIETDSPNILIGREGKNLDSLQLLTNVYASKLIGENGAFNRVILDIGDYRERFKSR
FINLAINSFHKVKRTRRSILLPSMNPFERRIVHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRYGINNSRGYQKRDIGF
KK

Sequences:

>Translated_242_residues
MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHAKEVKKDDFEIKIGDEICDKILEFVK
EMLIKMGYSVHLTIEPKEGGYVKISIETDSPNILIGREGKNLDSLQLLTNVYASKLIGENGAFNRVILDIGDYRERFKSR
FINLAINSFHKVKRTRRSILLPSMNPFERRIVHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRYGINNSRGYQKRDIGF
KK
>Mature_241_residues
SYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHAKEVKKDDFEIKIGDEICDKILEFVKE
MLIKMGYSVHLTIEPKEGGYVKISIETDSPNILIGREGKNLDSLQLLTNVYASKLIGENGAFNRVILDIGDYRERFKSRF
INLAINSFHKVKRTRRSILLPSMNPFERRIVHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRYGINNSRGYQKRDIGFK
K

Specific function: Unknown

COG id: COG1847

COG function: function code R; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 R3H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001374 [H]

Pfam domain/function: PF01424 R3H [H]

EC number: NA

Molecular weight: Translated: 28267; Mature: 28136

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHAKEVKK
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHEEEEEEEEEECCCHHHHCC
DDFEIKIGDEICDKILEFVKEMLIKMGYSVHLTIEPKEGGYVKISIETDSPNILIGREGK
CCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCC
NLDSLQLLTNVYASKLIGENGAFNRVILDIGDYRERFKSRFINLAINSFHKVKRTRRSIL
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LPSMNPFERRIVHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRYGINNSRGYQKRDIGF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC
KK
CC
>Mature Secondary Structure 
SYEFYGKTEQEAIKKAMRDLELKEGEFDVEILDKERVGFLFKKEMIKIRVSPHAKEVKK
CCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHEEEEEEEEEECCCHHHHCC
DDFEIKIGDEICDKILEFVKEMLIKMGYSVHLTIEPKEGGYVKISIETDSPNILIGREGK
CCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEEECCCCCEEEECCCC
NLDSLQLLTNVYASKLIGENGAFNRVILDIGDYRERFKSRFINLAINSFHKVKRTRRSIL
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LPSMNPFERRIVHTTLNRYSDIKTESEGDGNIKRIRVSYVRNNRYGINNSRGYQKRDIGF
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10427704; 11058132 [H]