Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 15594787

GI number: 15594787

Start: 460398

End: 462032

Strand: Direct

Name: oxaA [H]

Synonym: BB0442

Alternate gene names: 15594787

Gene position: 460398-462032 (Clockwise)

Preceding gene: 15594786

Following gene: 15594788

Centisome position: 50.55

GC content: 27.19

Gene sequence:

>1635_bases
GTGAATCAAAGTAGAAGAATTTTAAGAACAGTTTATTTGTCTTTATTTTTAATAGGTCTTTTCATGCTTATTAATGATAT
TTTTTCTTCAAACATTTTAAGTTCTAAGTCTTCTGATAAGGAAGTGCAGTTTGATTTAAACAAAAGTTTTGATGATAATG
AGATGTCTTCAGTTAAGAGTAATAGCTTTAATTTGATTAATAAATCTCAAGATATTATTGTAGAGACAGGGATATATGTT
GCTACTTTTTCTACATTTAAAGGAAATTTGGTTTCATTAAAGCTTAAAAATCATTTAAATTTGGAAAAAAATCCTACAGA
TTTGATTAATATTGATCGCAAAAATGAAACTTTTTTTGACATTAGTTTTGACTATTTTGTAGATGATTTGTTTTTGTATA
AAAAGATAGATGATTTTAATCATGAATTTAAAGCTTATTTTAAAAATAATGGTAAAACTTATGAATATGTAAAGAAGTAT
ACATTTTCGAAAAAAGATGAGTACTTAATGCAATTCAAAGTTACTGTAAATGGTCTTGAGGATTATAACTTATTTGATTT
TGATTCTTATAAAATTATTTTTAGTTCTGAGATTGAAAGGTTGAGTGATAAAGCAAAGCTACAATATAATAATTATTTGT
CTCAAATAATTTATTATGATAATAAGCTTAAATATGGTAAAGATGGTCTAAGGATTAACAATCCCAGATGGATTGGTTCT
AGTACTAAGTATTTTGGGGTGTTAGTTTCYAAAGAAAATATGGAGGTTGAATTTAAGAAGGAAAGAGGAACTCTTAAATC
GTTTATTATTAATAATGTTAGAAATAAAAAAAATATTAGCGATGAGTTTTTTATTTACGCTGGACCTAAGGATAATAGAT
ATTTAGACGTTTTTGACAAGAGAGATGACAATACCTTTGGTTTATTTGATATTTTTTTTGGAATGTCAGTGGAAAAGAGT
TTTTGGTATTTGATTCAAGTTCCTATGCAAATGGTAATGCAAGTTTTTTATGATGTTATACCTAATTGGGGGCTTTCAAT
TATTTTTTTGACAATTGTTGTTAGAATACTTATCTTTCCTTTGACATTTAAGGGATTTAGAGCTACTGCGGARCTTTCCA
AGCTTCAACCTAAAATGAAAGAGCTTCAAGCAAAGTTTAAGCATGATCCTAAAAAGTTAAATGAAGAGATGGGAAGGCTT
TATAAAGAAGAAGGAGTTAATCCTCTTGGGGGGTGTCTTCCTGTAATTTTGCAGCTTCCTATATTTTTTGCTCTTTATTC
ACTTGTAAATAATTTATTTTTATTAAGAGGAGCTAGTTTTATTCCAGGATGGATTGATGATTTATCTATCGGTGACAGTG
TATATCATTTTGGATATAAGCTTTATTTTGTTTCTTGGACCGATATTAGAATTTTGCCTTTTATTATGATGTTTACTCAA
TTGGGATCTACAATTGTTAGTTCTAATATGGATTTAAAAAATCTTGGGGCGCAGCAGAAGTTTTTATATTTTGGAATGCC
TATTATGTTTTTTTTCATACTTTACAATATGCCATCAGGGCTTTTAATATATTGGATTACAACAAATATTTTTACTATTT
TGCAGCAATACTATATAAAGATGCATTTGTCTTAA

Upstream 100 bases:

>100_bases
GATATTATTTTTGTAGTTTCTTATGGTAAGTTAACTTTGACTTATTTTAGCATTGAATCTCTCATGAAAGGTTTGGTTTT
AAGGTGTGAAAGGGGCATAG

Downstream 100 bases:

>100_bases
AGGGGGAATAATATGAGCTATGAATTTTACGGAAAAACCGAGCAAGAAGCAATAAAGAAAGCAATGAGAGATCTAGAATT
AAAAGAAGGCGAGTTTGATG

Product: protein translocase subunit YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKSNSFNLINKSQDIIVETGIYV
ATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNETFFDISFDYFVDDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKY
TFSKKDEYLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLRINNPRWIGS
STKYFGVLVSKENMEVEFKKERGTLKSFIINNVRNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKS
FWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKKLNEEMGRL
YKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQ
LGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS

Sequences:

>Translated_544_residues
MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKSNSFNLINKSQDIIVETGIYV
ATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNETFFDISFDYFVDDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKY
TFSKKDEYLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLRINNPRWIGS
STKYFGVLVSKENMEVEFKKERGTLKSFIINNVRNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKS
FWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKKLNEEMGRL
YKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQ
LGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS
>Mature_544_residues
MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKSNSFNLINKSQDIIVETGIYV
ATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNETFFDISFDYFVDDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKY
TFSKKDEYLMQFKVTVNGLEDYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLRINNPRWIGS
STKYFGVLVSKENMEVEFKKERGTLKSFIINNVRNKKNISDEFFIYAGPKDNRYLDVFDKRDDNTFGLFDIFFGMSVEKS
FWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFPLTFKGFRATAELSKLQPKMKELQAKFKHDPKKLNEEMGRL
YKEEGVNPLGGCLPVILQLPIFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQ
LGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIKMHLS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=230, Percent_Identity=34.7826086956522, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24662345, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356443, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 64003; Mature: 64003

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCC
NSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNETFFD
CCCEEECCCCCEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEE
ISFDYFVDDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDEYLMQFKVTVNGLE
EEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCC
DYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLRINNPRWIGS
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEECC
STKYFGVLVSKENMEVEFKKERGTLKSFIINNVRNKKNISDEFFIYAGPKDNRYLDVFDK
CCCEEEEEEECCCCEEEEEHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEC
RDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFP
CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LTFKGFRATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLP
CCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHH
LGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK
HHHHHHHCCCCHHHCCCCHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
MHLS
EECC
>Mature Secondary Structure
MNQSRRILRTVYLSLFLIGLFMLINDIFSSNILSSKSSDKEVQFDLNKSFDDNEMSSVKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCC
NSFNLINKSQDIIVETGIYVATFSTFKGNLVSLKLKNHLNLEKNPTDLINIDRKNETFFD
CCCEEECCCCCEEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEE
ISFDYFVDDLFLYKKIDDFNHEFKAYFKNNGKTYEYVKKYTFSKKDEYLMQFKVTVNGLE
EEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCC
DYNLFDFDSYKIIFSSEIERLSDKAKLQYNNYLSQIIYYDNKLKYGKDGLRINNPRWIGS
CCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEECC
STKYFGVLVSKENMEVEFKKERGTLKSFIINNVRNKKNISDEFFIYAGPKDNRYLDVFDK
CCCEEEEEEECCCCEEEEEHHCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEEEC
RDDNTFGLFDIFFGMSVEKSFWYLIQVPMQMVMQVFYDVIPNWGLSIIFLTIVVRILIFP
CCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LTFKGFRATAELSKLQPKMKELQAKFKHDPKKLNEEMGRLYKEEGVNPLGGCLPVILQLP
CCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IFFALYSLVNNLFLLRGASFIPGWIDDLSIGDSVYHFGYKLYFVSWTDIRILPFIMMFTQ
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHH
LGSTIVSSNMDLKNLGAQQKFLYFGMPIMFFFILYNMPSGLLIYWITTNIFTILQQYYIK
HHHHHHHCCCCHHHCCCCHHHHHHCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHH
MHLS
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA