Click here to switch to the map view.

The map label for this gene is comM [H]

Identifier: 15594432

GI number: 15594432

Start: 81405

End: 82940

Strand: Direct

Name: comM [H]

Synonym: BB0086

Alternate gene names: 15594432

Gene position: 81405-82940 (Clockwise)

Preceding gene: 15594431

Following gene: 15594447

Centisome position: 8.94

GC content: 30.92

Gene sequence:

>1536_bases
ATGAAAATCTATTCACACTCATCAATCGGATATGAAGGAGAACTAATTGAGATTGAAATAGACATTAAAAAAGGAATTTC
TGGAATTGATATCGTAGGACTTGCTGGGAGTGAAATTAAAGAATCAAGAGAAAGAGTAAAATCAGCTATCAAGAATTCAA
ATTTTCATTTTCCCAAAAATAGAATATTAATAAATCTTGCACCAGCTGGAATTAAAAAGCTTGGAACAGCTTTTGACCTT
TCGATCGCTATTAGTATTATTAAAATCCAAGAAAGCAAAGATGATAAAAATTTAGAAATCTTAATATTAGGAGAATTGCA
ATTAGATGGCAAAATAAGATCGATAAAAGCGGTTTTACCGGCCATTGCACTTGCCAAAGAAAAGGAAATAAAATTTGCAA
TAGTTCCCTTTGAAAATTTAGAAGAAGCTAGTTTAATAGATGGTTTGAATATTTGGGGTGTTAAAGACTTAAAAGAAACT
ATAAAAATAATAGAACAATTAAACAGCAATATACTCCCCCCAAGAACAAATACTAAACCCCAATCAATAATTGAAAAAGA
TTATATTATAGATTATGACTTTAAAAACATAAAAGGACAACAAAGAGCAAAAAGAGCAATTGAAATAGCAATTGCCGGTG
GGCATAACATCATGCTATTTGGTCCACCTGGAAGCGGAAAAACACTTAGTATTAAATGCGCCCAATCTATTCTTCCTCCA
CTTACAAACAAAGAGCTTATAGAAACAAACAGAATATGGTCAATATCTGGGAAATTAATAGACAGGAAAATAATAAAACA
AAGACCTTTTAGAAATCCCCACCACACTGCTAGCAAAGAAGGAATAATCGGTGGGGGTCCCAATCCTTTACCTGGGGAAG
TGTCTCTTGCCCACAACGGAATATTATTTTTAGATGAAGCTTTGGAATTTAAAAAATCTATCCTACAATCTTTACGCGAA
CCTATTGAAGACAAATCAATTTCAATCTCAAGAGCAAGTTCTAAATTATTCAAATACCCCGCCAACTTCCAATTAATGCT
TGCAATGAATCTTTGTCCTTGTGGAAATCTTGGAAAAAAAAATACAGATTGTTTTTGCTCACAACAAGAAATTTCAAATT
ATTGGAAAAAACTTGGAGCCGCAATGCTTGATAGAATTGATATTAGAGTCCCAACAAGAGCAATTAATAATGAAAAATTA
CTCAGCGAAACAAGCGAAAGTTCAAGTGAAATAAAACAAAGAATAATAAAAGCAAGAAATATTCAAAATATAAGATACGA
AAATTTTGCAAACATAAATAAAAATTCTGATCTTAATTCCGATCACATTGAAAAATTTTGCGAATTAAGTGCAATCTTAA
AAAATGATTTGATTTACATTTTAAATAAACTCAACATATCTTCAAGAGCAACACATTCAATACTAAAAATTGCAAGAACA
ATCTCCGATTTAAAGGAAGAAAAAAATATTTCAAGAGAAGCATTGCTTGAAGCAATTGAACACAGAAAAAACGGAGAAAA
TATGCTTGAAAAATGA

Upstream 100 bases:

>100_bases
ACGTATTTACAAATACAAATAGAAAAGACTGCTTTTTACTGCCATACAAATCATTAAAAGATAGTTTGGAAAGCTATAAG
CCTTTAAGGAGAACTATCAG

Downstream 100 bases:

>100_bases
AAACCCCCAAAATATTTGGGGTCTTAATACTAAAATTCCATTTTATCAATATAGCTTTTAAGCTGATTAGCAGAACTATT
AAACTTATCAAGCTCTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKIYSHSSIGYEGELIEIEIDIKKGISGIDIVGLAGSEIKESRERVKSAIKNSNFHFPKNRILINLAPAGIKKLGTAFDL
SIAISIIKIQESKDDKNLEILILGELQLDGKIRSIKAVLPAIALAKEKEIKFAIVPFENLEEASLIDGLNIWGVKDLKET
IKIIEQLNSNILPPRTNTKPQSIIEKDYIIDYDFKNIKGQQRAKRAIEIAIAGGHNIMLFGPPGSGKTLSIKCAQSILPP
LTNKELIETNRIWSISGKLIDRKIIKQRPFRNPHHTASKEGIIGGGPNPLPGEVSLAHNGILFLDEALEFKKSILQSLRE
PIEDKSISISRASSKLFKYPANFQLMLAMNLCPCGNLGKKNTDCFCSQQEISNYWKKLGAAMLDRIDIRVPTRAINNEKL
LSETSESSSEIKQRIIKARNIQNIRYENFANINKNSDLNSDHIEKFCELSAILKNDLIYILNKLNISSRATHSILKIART
ISDLKEEKNISREALLEAIEHRKNGENMLEK

Sequences:

>Translated_511_residues
MKIYSHSSIGYEGELIEIEIDIKKGISGIDIVGLAGSEIKESRERVKSAIKNSNFHFPKNRILINLAPAGIKKLGTAFDL
SIAISIIKIQESKDDKNLEILILGELQLDGKIRSIKAVLPAIALAKEKEIKFAIVPFENLEEASLIDGLNIWGVKDLKET
IKIIEQLNSNILPPRTNTKPQSIIEKDYIIDYDFKNIKGQQRAKRAIEIAIAGGHNIMLFGPPGSGKTLSIKCAQSILPP
LTNKELIETNRIWSISGKLIDRKIIKQRPFRNPHHTASKEGIIGGGPNPLPGEVSLAHNGILFLDEALEFKKSILQSLRE
PIEDKSISISRASSKLFKYPANFQLMLAMNLCPCGNLGKKNTDCFCSQQEISNYWKKLGAAMLDRIDIRVPTRAINNEKL
LSETSESSSEIKQRIIKARNIQNIRYENFANINKNSDLNSDHIEKFCELSAILKNDLIYILNKLNISSRATHSILKIART
ISDLKEEKNISREALLEAIEHRKNGENMLEK
>Mature_511_residues
MKIYSHSSIGYEGELIEIEIDIKKGISGIDIVGLAGSEIKESRERVKSAIKNSNFHFPKNRILINLAPAGIKKLGTAFDL
SIAISIIKIQESKDDKNLEILILGELQLDGKIRSIKAVLPAIALAKEKEIKFAIVPFENLEEASLIDGLNIWGVKDLKET
IKIIEQLNSNILPPRTNTKPQSIIEKDYIIDYDFKNIKGQQRAKRAIEIAIAGGHNIMLFGPPGSGKTLSIKCAQSILPP
LTNKELIETNRIWSISGKLIDRKIIKQRPFRNPHHTASKEGIIGGGPNPLPGEVSLAHNGILFLDEALEFKKSILQSLRE
PIEDKSISISRASSKLFKYPANFQLMLAMNLCPCGNLGKKNTDCFCSQQEISNYWKKLGAAMLDRIDIRVPTRAINNEKL
LSETSESSSEIKQRIIKARNIQNIRYENFANINKNSDLNSDHIEKFCELSAILKNDLIYILNKLNISSRATHSILKIART
ISDLKEEKNISREALLEAIEHRKNGENMLEK

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=509, Percent_Identity=37.721021611002, Blast_Score=314, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 57238; Mature: 57238

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYSHSSIGYEGELIEIEIDIKKGISGIDIVGLAGSEIKESRERVKSAIKNSNFHFPKN
CEEECCCCCCCCCEEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
RILINLAPAGIKKLGTAFDLSIAISIIKIQESKDDKNLEILILGELQLDGKIRSIKAVLP
CEEEEECCCCHHHHCCHHHHEEEEEEEEEECCCCCCCEEEEEEEEEEECCHHHHHHHHHH
AIALAKEKEIKFAIVPFENLEEASLIDGLNIWGVKDLKETIKIIEQLNSNILPPRTNTKP
HHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH
QSIIEKDYIIDYDFKNIKGQQRAKRAIEIAIAGGHNIMLFGPPGSGKTLSIKCAQSILPP
HHHHCCCCEEECCCCCCCCHHHHHHEEEEEEECCCEEEEECCCCCCCEEEEEEHHHHCCC
LTNKELIETNRIWSISGKLIDRKIIKQRPFRNPHHTASKEGIIGGGPNPLPGEVSLAHNG
CCCCHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
ILFLDEALEFKKSILQSLREPIEDKSISISRASSKLFKYPANFQLMLAMNLCPCGNLGKK
EEEEHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC
NTDCFCSQQEISNYWKKLGAAMLDRIDIRVPTRAINNEKLLSETSESSSEIKQRIIKARN
CCCCEECHHHHHHHHHHHHHHHHHHHCEECCCHHCCCHHHHHHHCCHHHHHHHHHHHHHC
IQNIRYENFANINKNSDLNSDHIEKFCELSAILKNDLIYILNKLNISSRATHSILKIART
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHCCCCHHHHHHHHHHHHH
ISDLKEEKNISREALLEAIEHRKNGENMLEK
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MKIYSHSSIGYEGELIEIEIDIKKGISGIDIVGLAGSEIKESRERVKSAIKNSNFHFPKN
CEEECCCCCCCCCEEEEEEEEHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCC
RILINLAPAGIKKLGTAFDLSIAISIIKIQESKDDKNLEILILGELQLDGKIRSIKAVLP
CEEEEECCCCHHHHCCHHHHEEEEEEEEEECCCCCCCEEEEEEEEEEECCHHHHHHHHHH
AIALAKEKEIKFAIVPFENLEEASLIDGLNIWGVKDLKETIKIIEQLNSNILPPRTNTKP
HHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCH
QSIIEKDYIIDYDFKNIKGQQRAKRAIEIAIAGGHNIMLFGPPGSGKTLSIKCAQSILPP
HHHHCCCCEEECCCCCCCCHHHHHHEEEEEEECCCEEEEECCCCCCCEEEEEEHHHHCCC
LTNKELIETNRIWSISGKLIDRKIIKQRPFRNPHHTASKEGIIGGGPNPLPGEVSLAHNG
CCCCHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
ILFLDEALEFKKSILQSLREPIEDKSISISRASSKLFKYPANFQLMLAMNLCPCGNLGKK
EEEEHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC
NTDCFCSQQEISNYWKKLGAAMLDRIDIRVPTRAINNEKLLSETSESSSEIKQRIIKARN
CCCCEECHHHHHHHHHHHHHHHHHHHCEECCCHHCCCHHHHHHHCCHHHHHHHHHHHHHC
IQNIRYENFANINKNSDLNSDHIEKFCELSAILKNDLIYILNKLNISSRATHSILKIART
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEHHHHCCCCHHHHHHHHHHHHH
ISDLKEEKNISREALLEAIEHRKNGENMLEK
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]