| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is pgk [H]
Identifier: 15594402
GI number: 15594402
Start: 51253
End: 52434
Strand: Reverse
Name: pgk [H]
Synonym: BB0056
Alternate gene names: 15594402
Gene position: 52434-51253 (Counterclockwise)
Preceding gene: 15594403
Following gene: 15594401
Centisome position: 5.76
GC content: 35.7
Gene sequence:
>1182_bases ATGTCAATAAAAACAGTAAAAGACTTTAGTAGCTTTGCGGGCAAGCGAGCTTTAGTAAGATGTGATTTTAATGTTCCCCT AAAAGAGGGGAGCATTAGCGATGATACTAGAATTAGGGCAGCATTGTCTACAATAGAGTATCTAAAAGAAAGAGGAGCTA GGATTGTGCTTGTAAGTCATTTGGGTAGACCAGATGGAAAGAAAAATCCTAAATATTCTCTTAAGCCGGTTGCCAATAGG TTGTCAGAGCTTTTAGGCCAAGATGTCAAGATGCTTTCTGATTGTATTGGAAGTGAGGTTGTAAATAGTACCTTGCAAAT GAAGGATGGGGATGTTGTATTGCTTGAAAATGTAAGGTTTTATGCAGAAGAAGAGAAAAACGATAAAAATTTTGCAAAAA AACTTTCTGAAAATGGAGATGTTTTTGTAAATGATGCTTTTGGCGCAGCTCATAGAGCTCATGCTTCAACTGTGGGAGTT GCTGATTATTTGCCGTCTGTTGGTGGATTTTTAATGGAAAAAGAAGATAAATTTCTTGGTGGAATATTAAAAAATCCCGA AAGGCCATTTGTTTCAATTATTGGTGGTTCTAAGGTTTCTTCAAAGATTGCGGTACTAGAATCACTTTTGTCAAAGTCTA ATGTAGTTGTGATTGGCGGTGGAATGGCTTATACTTTTTTGCATTCCGAAGGATATTCTATAGGCAAATCTCTTTTAGAG GACGAATATATTGGTATAGCATCTTCTTTTTTAAAGAAAGCAAAAGAGCTGGGCGTTAAAGTAATTTTACCACTTGATCA TATTGTAGCTGATGATTTTAACAAAAATTCAATTCCTGAGTATATTGACTCCTTTAATATTCCTGAAAACAAGATTGGCA TGGATATTGGAGCTAATACTTTAAAAGAAATTGAAAATGTTGTGAAAACTGCCAAAACTATAATTTGGAATGGTCCTCTT GGTGTATTTGAATTTGATTCATTTTCAAAAGGGACTGCTAAGGTTGCCGAAATGGTAGCATCTTGCTCAGGTTTAACCGT TGTTGGTGGTGGAGATTCTGTTGCAGCTGTTAATAAATTTAATTTATCTGATAAGATTACTCATGTTTCAACGGGCGGTG GTGCATCGCTTGAATATCTTGAAGGGAGAATTTTGCCGGGTATTAAGGTTTTGGAGAATTAA
Upstream 100 bases:
>100_bases GCAAAGATATTGTCATGGTATGACAATGAGTTTGGATATTCTACAAGAGTGGTTGATCTTGCTCAAAAATTGGTAAAATA AGTAAGCTTAAGGTAATAAA
Downstream 100 bases:
>100_bases AATGAGAAAAACATTTTTAGCGGGAAATTGGAAAATGCATTATACAAGTGCAGAAGCTTCTATTGTTGCAAAAAAAATTG CAACTGAGGTTAAGACCTTA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSIKTVKDFSSFAGKRALVRCDFNVPLKEGSISDDTRIRAALSTIEYLKERGARIVLVSHLGRPDGKKNPKYSLKPVANR LSELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRFYAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGV ADYLPSVGGFLMEKEDKFLGGILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVIGGGMAYTFLHSEGYSIGKSLLE DEYIGIASSFLKKAKELGVKVILPLDHIVADDFNKNSIPEYIDSFNIPENKIGMDIGANTLKEIENVVKTAKTIIWNGPL GVFEFDSFSKGTAKVAEMVASCSGLTVVGGGDSVAAVNKFNLSDKITHVSTGGGASLEYLEGRILPGIKVLEN
Sequences:
>Translated_393_residues MSIKTVKDFSSFAGKRALVRCDFNVPLKEGSISDDTRIRAALSTIEYLKERGARIVLVSHLGRPDGKKNPKYSLKPVANR LSELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRFYAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGV ADYLPSVGGFLMEKEDKFLGGILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVIGGGMAYTFLHSEGYSIGKSLLE DEYIGIASSFLKKAKELGVKVILPLDHIVADDFNKNSIPEYIDSFNIPENKIGMDIGANTLKEIENVVKTAKTIIWNGPL GVFEFDSFSKGTAKVAEMVASCSGLTVVGGGDSVAAVNKFNLSDKITHVSTGGGASLEYLEGRILPGIKVLEN >Mature_392_residues SIKTVKDFSSFAGKRALVRCDFNVPLKEGSISDDTRIRAALSTIEYLKERGARIVLVSHLGRPDGKKNPKYSLKPVANRL SELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRFYAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGVA DYLPSVGGFLMEKEDKFLGGILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVIGGGMAYTFLHSEGYSIGKSLLED EYIGIASSFLKKAKELGVKVILPLDHIVADDFNKNSIPEYIDSFNIPENKIGMDIGANTLKEIENVVKTAKTIIWNGPLG VFEFDSFSKGTAKVAEMVASCSGLTVVGGGDSVAAVNKFNLSDKITHVSTGGGASLEYLEGRILPGIKVLEN
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=416, Percent_Identity=44.7115384615385, Blast_Score=347, Evalue=2e-95, Organism=Homo sapiens, GI31543397, Length=416, Percent_Identity=45.4326923076923, Blast_Score=343, Evalue=2e-94, Organism=Escherichia coli, GI1789294, Length=395, Percent_Identity=41.7721518987342, Blast_Score=311, Evalue=5e-86, Organism=Caenorhabditis elegans, GI17508823, Length=405, Percent_Identity=46.1728395061728, Blast_Score=362, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6319857, Length=397, Percent_Identity=46.095717884131, Blast_Score=331, Evalue=1e-91, Organism=Drosophila melanogaster, GI17136394, Length=401, Percent_Identity=45.3865336658354, Blast_Score=331, Evalue=6e-91, Organism=Drosophila melanogaster, GI24581203, Length=403, Percent_Identity=43.424317617866, Blast_Score=330, Evalue=9e-91,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42346; Mature: 42215
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKTVKDFSSFAGKRALVRCDFNVPLKEGSISDDTRIRAALSTIEYLKERGARIVLVSH CCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC LGRPDGKKNPKYSLKPVANRLSELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECEEE YAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGVADYLPSVGGFLMEKEDKFLG EHHHCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH GILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVIGGGMAYTFLHSEGYSIGKSLLE HHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCHHHHHHHHH DEYIGIASSFLKKAKELGVKVILPLDHIVADDFNKNSIPEYIDSFNIPENKIGMDIGANT HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCHHHHHCCCCCCHHCCCCCCHHH LKEIENVVKTAKTIIWNGPLGVFEFDSFSKGTAKVAEMVASCSGLTVVGGGDSVAAVNKF HHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEE NLSDKITHVSTGGGASLEYLEGRILPGIKVLEN CCCCCEEEEECCCCCCHHHHCCCCCCCHHHHCC >Mature Secondary Structure SIKTVKDFSSFAGKRALVRCDFNVPLKEGSISDDTRIRAALSTIEYLKERGARIVLVSH CCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC LGRPDGKKNPKYSLKPVANRLSELLGQDVKMLSDCIGSEVVNSTLQMKDGDVVLLENVRF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECEEE YAEEEKNDKNFAKKLSENGDVFVNDAFGAAHRAHASTVGVADYLPSVGGFLMEKEDKFLG EHHHCCCHHHHHHHHCCCCCEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHH GILKNPERPFVSIIGGSKVSSKIAVLESLLSKSNVVVIGGGMAYTFLHSEGYSIGKSLLE HHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCEEEEEEECCCHHHHHHHHH DEYIGIASSFLKKAKELGVKVILPLDHIVADDFNKNSIPEYIDSFNIPENKIGMDIGANT HHHHHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCHHHHHCCCCCCHHCCCCCCHHH LKEIENVVKTAKTIIWNGPLGVFEFDSFSKGTAKVAEMVASCSGLTVVGGGDSVAAVNKF HHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEE NLSDKITHVSTGGGASLEYLEGRILPGIKVLEN CCCCCEEEEECCCCCCHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA