| Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
|---|---|
| Accession | NC_001318 |
| Length | 910,724 |
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The map label for this gene is 15594384
Identifier: 15594384
GI number: 15594384
Start: 36606
End: 38123
Strand: Reverse
Name: 15594384
Synonym: BB0038
Alternate gene names: NA
Gene position: 38123-36606 (Counterclockwise)
Preceding gene: 15594385
Following gene: 15594383
Centisome position: 4.19
GC content: 25.96
Gene sequence:
>1518_bases ATGACAAAGGTTTTGGTTGTTAGTGCGATTGCTCTTCTGAGTAAGGATAAAGAATTAATCCCATTTTATAAATTTTTGTT TTTATTCTTTTTTTTTACATTACTTGCTTGTTCCAAGGTAAGCAAAGATTTTATTGTTTTTAACAAAGATGTAAAGACTT CTTCCAGGATCGATAATCCAAATTCCAATGTTTTAGAAGTTAATAAAATGGAAGATTTTTTTGGAGATATTATAGATTTA AAAGGTTATAAAATTCTTTCAGTTCAGCAGGAAAATTTAAATTTAGATGTGTATTTTGAGCAGGTGGTTTTAGCTCAAAA TTTTTCAAATCTTAATGCATATTTGTTTATTATTGGTTTTGATCCTAAAATTAAAGCTGGAACGATTCTTTTTAAAACTC AAATAGATATTGATCCAAAAAATTCTTATAACATGTATCTTGAAGATATTACAGGTGATTATGATTTTAATATAGTTATT CAAGGATTTTTAAAAGATAAATCTGTTTTGTATGTTTTTCAAAAATCTGTTTTAAATGATGTGTCTTCTTATAGGCCTAT ATTTTTTGACAAAGTTAATGGAACTGTTCTTATTAATAAGTATGCAAGATCTTCAGCTTATGAAGAAAACAGATCAAGAG AAAGCTATCCTATTTCTTTAGAAAAATATGAAAAAGTGGGGGAAGATTTAATAATTAGCAAGATTGAAAAATATGAATAT TCTAATGTTCAGGGTAGATATTGTCTTTCTTCTGTGAGCGAAAAAGTTGGTAAAATTGATAATAATATTTATAAAACTTT AAAGAATTTAAGCAAAGATGAAGTTTATAAATTTTTGCATGGAGTTTGGTATGATGTTCATGACTATAATAAAATGCATG TCAAAGATATTGATGAAGTTTTATTCTTGTCTTTTGAAAGGCAATCAAGCGAGATTAATCTTTTCAGGAAAAATTCTCAA GAAGTTGCAAAGATTGAATATATTTCAAAACCTGCTTACAATACTCTTAATGTTAGTGCAAAGTCTCTTTTTTCAGATTT GATAGTTTATAACTTTTGGATCAAAATTGTAGATAAAGAAAACATTGAAATCAAAATTGACACTAGCACAAATTCTTATG ATAATAGTGGATTTTCGGGTACATTTAAGAGGTTTGATGAGAATGTCTTAAATGTTAAAAAAGGGAGTAGTGATATTTAT TTTATTCCTAGTGGAAATTACGTGTATAAGGATAAAATTTATGATTTTTCTTACCCCCATTTAACTTATATTGATGAGAA TAAAATTTATTATGGCATTTTTAATATTTTTCCTTTAAAAAATAATTTTGTTCTTGAATATGAGATTGACATGGGTAGTT ACAAGCTTGTTGAATCTTTTTTCCTTGAGCATAGCGAAAGAATTGTTCAAAAGCAAAAATTTTCTACAATCATTTTAAAT CCTATTAAAATTTTAAAAGATGATGTAAGCTTAGTTAAAGGGCAAAAATTAAAGCTTGAGCGAATAGAAAAAATATGA
Upstream 100 bases:
>100_bases GATTACAGATTTTTTACTGAATAAAAAAGATTTTGTTAATAATTTTAATGAGTCGTTTTTTGCTTTGCAAAACTTTAGTC AAAATTAAGAAATAAATGTT
Downstream 100 bases:
>100_bases TAATAGTTTTTATGAAAATATTGAGAAGTATTATAACTTATTTTAATGTTTTATTGTTTTTTTTGATTTTAATTTTTTTT TTATTTCCTTTTTACCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MTKVLVVSAIALLSKDKELIPFYKFLFLFFFFTLLACSKVSKDFIVFNKDVKTSSRIDNPNSNVLEVNKMEDFFGDIIDL KGYKILSVQQENLNLDVYFEQVVLAQNFSNLNAYLFIIGFDPKIKAGTILFKTQIDIDPKNSYNMYLEDITGDYDFNIVI QGFLKDKSVLYVFQKSVLNDVSSYRPIFFDKVNGTVLINKYARSSAYEENRSRESYPISLEKYEKVGEDLIISKIEKYEY SNVQGRYCLSSVSEKVGKIDNNIYKTLKNLSKDEVYKFLHGVWYDVHDYNKMHVKDIDEVLFLSFERQSSEINLFRKNSQ EVAKIEYISKPAYNTLNVSAKSLFSDLIVYNFWIKIVDKENIEIKIDTSTNSYDNSGFSGTFKRFDENVLNVKKGSSDIY FIPSGNYVYKDKIYDFSYPHLTYIDENKIYYGIFNIFPLKNNFVLEYEIDMGSYKLVESFFLEHSERIVQKQKFSTIILN PIKILKDDVSLVKGQKLKLERIEKI
Sequences:
>Translated_505_residues MTKVLVVSAIALLSKDKELIPFYKFLFLFFFFTLLACSKVSKDFIVFNKDVKTSSRIDNPNSNVLEVNKMEDFFGDIIDL KGYKILSVQQENLNLDVYFEQVVLAQNFSNLNAYLFIIGFDPKIKAGTILFKTQIDIDPKNSYNMYLEDITGDYDFNIVI QGFLKDKSVLYVFQKSVLNDVSSYRPIFFDKVNGTVLINKYARSSAYEENRSRESYPISLEKYEKVGEDLIISKIEKYEY SNVQGRYCLSSVSEKVGKIDNNIYKTLKNLSKDEVYKFLHGVWYDVHDYNKMHVKDIDEVLFLSFERQSSEINLFRKNSQ EVAKIEYISKPAYNTLNVSAKSLFSDLIVYNFWIKIVDKENIEIKIDTSTNSYDNSGFSGTFKRFDENVLNVKKGSSDIY FIPSGNYVYKDKIYDFSYPHLTYIDENKIYYGIFNIFPLKNNFVLEYEIDMGSYKLVESFFLEHSERIVQKQKFSTIILN PIKILKDDVSLVKGQKLKLERIEKI >Mature_504_residues TKVLVVSAIALLSKDKELIPFYKFLFLFFFFTLLACSKVSKDFIVFNKDVKTSSRIDNPNSNVLEVNKMEDFFGDIIDLK GYKILSVQQENLNLDVYFEQVVLAQNFSNLNAYLFIIGFDPKIKAGTILFKTQIDIDPKNSYNMYLEDITGDYDFNIVIQ GFLKDKSVLYVFQKSVLNDVSSYRPIFFDKVNGTVLINKYARSSAYEENRSRESYPISLEKYEKVGEDLIISKIEKYEYS NVQGRYCLSSVSEKVGKIDNNIYKTLKNLSKDEVYKFLHGVWYDVHDYNKMHVKDIDEVLFLSFERQSSEINLFRKNSQE VAKIEYISKPAYNTLNVSAKSLFSDLIVYNFWIKIVDKENIEIKIDTSTNSYDNSGFSGTFKRFDENVLNVKKGSSDIYF IPSGNYVYKDKIYDFSYPHLTYIDENKIYYGIFNIFPLKNNFVLEYEIDMGSYKLVESFFLEHSERIVQKQKFSTIILNP IKILKDDVSLVKGQKLKLERIEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y038_BORBU (O51067)
Other databases:
- EMBL: AE000783 - PIR: F70104 - RefSeq: NP_212172.1 - EnsemblBacteria: EBBORT00000008862 - GeneID: 1194874 - GenomeReviews: AE000783_GR - KEGG: bbu:BB0038 - NMPDR: fig|224326.1.peg.422 - TIGR: BB_0038 - GeneTree: EBGT00050000007498 - HOGENOM: HBG354427 - OMA: NMYLEDI - ProtClustDB: CLSK507309 - BioCyc: BBUR224326:BB_0038-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59024; Mature: 58893
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbab4d10)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVLVVSAIALLSKDKELIPFYKFLFLFFFFTLLACSKVSKDFIVFNKDVKTSSRIDNP CCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC NSNVLEVNKMEDFFGDIIDLKGYKILSVQQENLNLDVYFEQVVLAQNFSNLNAYLFIIGF CCCEEEEECHHHHHCCCEECCCEEEEEEEECCCCEEEEEHHHHHHHCCCCCEEEEEEEEC DPKIKAGTILFKTQIDIDPKNSYNMYLEDITGDYDFNIVIQGFLKDKSVLYVFQKSVLND CCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEHHHHHHHHHH VSSYRPIFFDKVNGTVLINKYARSSAYEENRSRESYPISLEKYEKVGEDLIISKIEKYEY HHHCCCEEEEECCCEEEEECHHCCCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCC SNVQGRYCLSSVSEKVGKIDNNIYKTLKNLSKDEVYKFLHGVWYDVHDYNKMHVKDIDEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEHHHHHHH LFLSFERQSSEINLFRKNSQEVAKIEYISKPAYNTLNVSAKSLFSDLIVYNFWIKIVDKE HEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHEEEEEEEECC NIEIKIDTSTNSYDNSGFSGTFKRFDENVLNVKKGSSDIYFIPSGNYVYKDKIYDFSYPH CEEEEEECCCCCCCCCCCCCHHHHHCCHHEEEECCCCCEEEEECCCEEEECEEEECCCCE LTYIDENKIYYGIFNIFPLKNNFVLEYEIDMGSYKLVESFFLEHSERIVQKQKFSTIILN EEEEECCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC PIKILKDDVSLVKGQKLKLERIEKI HHHHHHHHHHHHCCCCCCHHHHHCH >Mature Secondary Structure TKVLVVSAIALLSKDKELIPFYKFLFLFFFFTLLACSKVSKDFIVFNKDVKTSSRIDNP CEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC NSNVLEVNKMEDFFGDIIDLKGYKILSVQQENLNLDVYFEQVVLAQNFSNLNAYLFIIGF CCCEEEEECHHHHHCCCEECCCEEEEEEEECCCCEEEEEHHHHHHHCCCCCEEEEEEEEC DPKIKAGTILFKTQIDIDPKNSYNMYLEDITGDYDFNIVIQGFLKDKSVLYVFQKSVLND CCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCEEEEEEEEECCCCEEHHHHHHHHHH VSSYRPIFFDKVNGTVLINKYARSSAYEENRSRESYPISLEKYEKVGEDLIISKIEKYEY HHHCCCEEEEECCCEEEEECHHCCCHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHCC SNVQGRYCLSSVSEKVGKIDNNIYKTLKNLSKDEVYKFLHGVWYDVHDYNKMHVKDIDEV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEHHHHHHH LFLSFERQSSEINLFRKNSQEVAKIEYISKPAYNTLNVSAKSLFSDLIVYNFWIKIVDKE HEEEECCCCCCEEEEECCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHEEEEEEEECC NIEIKIDTSTNSYDNSGFSGTFKRFDENVLNVKKGSSDIYFIPSGNYVYKDKIYDFSYPH CEEEEEECCCCCCCCCCCCCHHHHHCCHHEEEECCCCCEEEEECCCEEEECEEEECCCCE LTYIDENKIYYGIFNIFPLKNNFVLEYEIDMGSYKLVESFFLEHSERIVQKQKFSTIILN EEEEECCCEEEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC PIKILKDDVSLVKGQKLKLERIEKI HHHHHHHHHHHHCCCCCCHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685