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The map label for this gene is ytrD [H]

Identifier: 154687164

GI number: 154687164

Start: 2863397

End: 2864377

Strand: Reverse

Name: ytrD [H]

Synonym: RBAM_027360

Alternate gene names: 154687164

Gene position: 2864377-2863397 (Counterclockwise)

Preceding gene: 154687165

Following gene: 154687163

Centisome position: 73.1

GC content: 44.34

Gene sequence:

>981_bases
GTGCCGATTAGCGGTTTGCTTTATAAAGAATGGAAGCAGCGGCAGATGCTGCTGCTTCTTACAGCGGGGTTCTTAGCTAT
TTTAGGCCCTTTGGCAATTATAAATGAGTATTTTCACTATAAGGATTGTTTGAGTGCGCTTCATCAATATTCAGGTTCAG
TTTGTACGTTCAGCATTGATTACAGCAATCGGAATTTGATCGGGCTGCATTTCATTCCTCCGGTTATGATGGGGCTTTTT
CTGATAAGAGGAGGCCGGGCTGAAAGGATGTTTACACTGAGTCTTCCGTATTCGAGAAGCCGGATATTTCATACGAAGTT
TTTCTTGGGAGCAGCCGTGTTAGCCGGCTCGCAGTTTGTTTCTTACGGAGTATCTGACATATTGTTTCTAGCGCTTAAAC
CTGACGCTGTCCATCATTTTCAATCATTCAGCGCAGGGATGCTGGTCATCAGCTTGATGATTTATGCATTAGTGACAGCT
GCCGGCACGATAACGGGCAATTTAGCGGCGCAGCTGATCACAGCGTTCACGGTTTCCGTCTTTCCGATCGTGGTTATGAC
GATTTACCTGTTAAACGCTGAGTTCCTTTTTGGCAGGCAGGCTGTGCCGGATATTGATTTCCCTTGGAGCGGATTTCTGA
TCTATTTCATGCCTGCCGCTTACATCCATACATCATGGATGTATTACATGAAACACGCATTGTTCATCTCCGCATTAATG
GGATGTTGTTTCTATCTATTCGGCTATGTGAATTTCCTGAAAATGCCGAGTGAACGAAGCGGACATTTTATCCTAAGCAA
ACACATTGAACGCACCATTCAAGTGCTCGTCATGGTGCTCAGTATGCTGGGAAGTGCGGGGGTATGCGGATATGCTTATA
ACGGTTCGTATACCGGTTATATATTCGGCATGCTTATCGGCGCGGTTATCGGGTTTTTCATCAGTTATTACTTCATCTAT
AAAAAAACGAAACAGATATAA

Upstream 100 bases:

>100_bases
CGGCGCGGTTATCGGGTTTTTCATCAGTTATTTTACGGTTTACAGGAAGTCAAAGCATATGTAGATCTGTTTGAAAATGA
GCAGTTTGGAGGAAGGCAAG

Downstream 100 bases:

>100_bases
GGGGGAGTGGTGTACGTGATAGAAGTACAGCATATTGATCATTCATTTAAAATCGGCAGGAAAGGCAGAGAGAGTGAGGT
TCCGGTATTGAAGGATGTCT

Product: YtrD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MPISGLLYKEWKQRQMLLLLTAGFLAILGPLAIINEYFHYKDCLSALHQYSGSVCTFSIDYSNRNLIGLHFIPPVMMGLF
LIRGGRAERMFTLSLPYSRSRIFHTKFFLGAAVLAGSQFVSYGVSDILFLALKPDAVHHFQSFSAGMLVISLMIYALVTA
AGTITGNLAAQLITAFTVSVFPIVVMTIYLLNAEFLFGRQAVPDIDFPWSGFLIYFMPAAYIHTSWMYYMKHALFISALM
GCCFYLFGYVNFLKMPSERSGHFILSKHIERTIQVLVMVLSMLGSAGVCGYAYNGSYTGYIFGMLIGAVIGFFISYYFIY
KKTKQI

Sequences:

>Translated_326_residues
MPISGLLYKEWKQRQMLLLLTAGFLAILGPLAIINEYFHYKDCLSALHQYSGSVCTFSIDYSNRNLIGLHFIPPVMMGLF
LIRGGRAERMFTLSLPYSRSRIFHTKFFLGAAVLAGSQFVSYGVSDILFLALKPDAVHHFQSFSAGMLVISLMIYALVTA
AGTITGNLAAQLITAFTVSVFPIVVMTIYLLNAEFLFGRQAVPDIDFPWSGFLIYFMPAAYIHTSWMYYMKHALFISALM
GCCFYLFGYVNFLKMPSERSGHFILSKHIERTIQVLVMVLSMLGSAGVCGYAYNGSYTGYIFGMLIGAVIGFFISYYFIY
KKTKQI
>Mature_325_residues
PISGLLYKEWKQRQMLLLLTAGFLAILGPLAIINEYFHYKDCLSALHQYSGSVCTFSIDYSNRNLIGLHFIPPVMMGLFL
IRGGRAERMFTLSLPYSRSRIFHTKFFLGAAVLAGSQFVSYGVSDILFLALKPDAVHHFQSFSAGMLVISLMIYALVTAA
GTITGNLAAQLITAFTVSVFPIVVMTIYLLNAEFLFGRQAVPDIDFPWSGFLIYFMPAAYIHTSWMYYMKHALFISALMG
CCFYLFGYVNFLKMPSERSGHFILSKHIERTIQVLVMVLSMLGSAGVCGYAYNGSYTGYIFGMLIGAVIGFFISYYFIYK
KTKQI

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-5 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36638; Mature: 36507

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISGLLYKEWKQRQMLLLLTAGFLAILGPLAIINEYFHYKDCLSALHQYSGSVCTFSID
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
YSNRNLIGLHFIPPVMMGLFLIRGGRAERMFTLSLPYSRSRIFHTKFFLGAAVLAGSQFV
CCCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
SYGVSDILFLALKPDAVHHFQSFSAGMLVISLMIYALVTAAGTITGNLAAQLITAFTVSV
HHCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPIVVMTIYLLNAEFLFGRQAVPDIDFPWSGFLIYFMPAAYIHTSWMYYMKHALFISALM
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GCCFYLFGYVNFLKMPSERSGHFILSKHIERTIQVLVMVLSMLGSAGVCGYAYNGSYTGY
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHH
IFGMLIGAVIGFFISYYFIYKKTKQI
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PISGLLYKEWKQRQMLLLLTAGFLAILGPLAIINEYFHYKDCLSALHQYSGSVCTFSID
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE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HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]