Definition Bacillus amyloliquefaciens FZB42, complete genome.
Accession NC_009725
Length 3,918,589

Click here to switch to the map view.

The map label for this gene is ytvB [H]

Identifier: 154687154

GI number: 154687154

Start: 2853077

End: 2853406

Strand: Reverse

Name: ytvB [H]

Synonym: RBAM_027260

Alternate gene names: 154687154

Gene position: 2853406-2853077 (Counterclockwise)

Preceding gene: 154687156

Following gene: 154687153

Centisome position: 72.82

GC content: 43.64

Gene sequence:

>330_bases
ATGCTGCATCAGGTAATAATTGCTTGTGTAATTGGAGGAATCATGGGGGTTCTCGGTCATGTGAAAAAGAGAGGCAGGCT
GGAGAAACCTAGAATGACAAAGCGGTTTATCTATCTCGGTTTTTTGGAAGATGGTTTTATCGGAATGGCTGCTTCCATCT
TACTTGTCTTATCCGCTGACCCCGATTCAGGAATTCAACTCGTCATCTTATCCATAATCGCAGGCTACGGCGGAGAAGCT
GTTCTCAGGAGCTTTGATTTTGTCAGAGAACAAAACAGTGATTCGGCCGAAGCAAAACCACACCAGCAAAAAAATCCTCC
ATCAAAATAA

Upstream 100 bases:

>100_bases
CAATCGCCGGTATGTAGATATCGAAAATCATCGTATTCGTAAGGGGGCTGGATGGCCTGAAGTCGCTTTACTAAATAAGG
GCTTTAGGAAGGTGATGAAG

Downstream 100 bases:

>100_bases
TATCCCCGCTCATGACCCGTTCCGGGTACATTCCCATTGTATACAAACCTGCTTGCACTTATGAACAGAATTCTATAAAA
TACAGGTAAGATTACGGTAG

Product: YtvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MLHQVIIACVIGGIMGVLGHVKKRGRLEKPRMTKRFIYLGFLEDGFIGMAASILLVLSADPDSGIQLVILSIIAGYGGEA
VLRSFDFVREQNSDSAEAKPHQQKNPPSK

Sequences:

>Translated_109_residues
MLHQVIIACVIGGIMGVLGHVKKRGRLEKPRMTKRFIYLGFLEDGFIGMAASILLVLSADPDSGIQLVILSIIAGYGGEA
VLRSFDFVREQNSDSAEAKPHQQKNPPSK
>Mature_109_residues
MLHQVIIACVIGGIMGVLGHVKKRGRLEKPRMTKRFIYLGFLEDGFIGMAASILLVLSADPDSGIQLVILSIIAGYGGEA
VLRSFDFVREQNSDSAEAKPHQQKNPPSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11863; Mature: 11863

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQVIIACVIGGIMGVLGHVKKRGRLEKPRMTKRFIYLGFLEDGFIGMAASILLVLSAD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCCHHHHHHHHHHHEECC
PDSGIQLVILSIIAGYGGEAVLRSFDFVREQNSDSAEAKPHQQKNPPSK
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLHQVIIACVIGGIMGVLGHVKKRGRLEKPRMTKRFIYLGFLEDGFIGMAASILLVLSAD
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCCCCHHHHHHHHHHHEECC
PDSGIQLVILSIIAGYGGEAVLRSFDFVREQNSDSAEAKPHQQKNPPSK
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]