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The map label for this gene is ysdA [H]

Identifier: 154687018

GI number: 154687018

Start: 2715353

End: 2715619

Strand: Reverse

Name: ysdA [H]

Synonym: RBAM_025900

Alternate gene names: 154687018

Gene position: 2715619-2715353 (Counterclockwise)

Preceding gene: 154687019

Following gene: 154687016

Centisome position: 69.3

GC content: 47.57

Gene sequence:

>267_bases
ATGGCTCTCCTCATTTACGCCGTGTTGATAAACGGATACGGCTTTTGGATCATGGGCGCTGATAAAAGAAGAGCAAAGGC
GCACAGGTGGAGAATATCAGAGAAACGAATATGGCTCACAGCCGTCATGTTCGGCTCACTCGGCGTATGGATCGGCATGC
GCACCTTCAGGCATAAGACGAAACACAAATCCTTTTTATACGGGGTGCCGCTGCTTTTTCTCACTGAAGCCGCCCTTGTG
CTGATGTATTTGATGTATAAAACATAA

Upstream 100 bases:

>100_bases
CAATCAGCTTGCTGATGCTGCTAAAGCTCAGTTAGACAAGTAAGTTGAAAAAGCCGCTCTCTTTCCGGGAGCGGTTTTTT
TACGTAAAGGGTGACAATCA

Downstream 100 bases:

>100_bases
AAAGCAGGAGAGCTTATCGCTCGCCTGCTTTTTTCGCTTTTTTGATGGGCTGGTCCCAATCAATCTTGCAATTCGGATAC
CGCTCCAATACCTTTTTTTC

Product: YsdA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MALLIYAVLINGYGFWIMGADKRRAKAHRWRISEKRIWLTAVMFGSLGVWIGMRTFRHKTKHKSFLYGVPLLFLTEAALV
LMYLMYKT

Sequences:

>Translated_88_residues
MALLIYAVLINGYGFWIMGADKRRAKAHRWRISEKRIWLTAVMFGSLGVWIGMRTFRHKTKHKSFLYGVPLLFLTEAALV
LMYLMYKT
>Mature_87_residues
ALLIYAVLINGYGFWIMGADKRRAKAHRWRISEKRIWLTAVMFGSLGVWIGMRTFRHKTKHKSFLYGVPLLFLTEAALVL
MYLMYKT

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 10356; Mature: 10225

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLIYAVLINGYGFWIMGADKRRAKAHRWRISEKRIWLTAVMFGSLGVWIGMRTFRHKT
CHHHHEEHHHCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KHKSFLYGVPLLFLTEAALVLMYLMYKT
HCCHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALLIYAVLINGYGFWIMGADKRRAKAHRWRISEKRIWLTAVMFGSLGVWIGMRTFRHKT
HHHHEEHHHCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KHKSFLYGVPLLFLTEAALVLMYLMYKT
HCCHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]