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The map label for this gene is yqxD [C]

Identifier: 154686783

GI number: 154686783

Start: 2472887

End: 2473393

Strand: Reverse

Name: yqxD [C]

Synonym: RBAM_023530

Alternate gene names: 154686783

Gene position: 2473393-2472887 (Counterclockwise)

Preceding gene: 154686784

Following gene: 154686782

Centisome position: 63.12

GC content: 41.62

Gene sequence:

>507_bases
ATGGAGGGATGGAGAATTAGTCTTCTAAATGAAAAAGAAAAGACGATTTTTGTCGATGCAGACGCATGCCCCGTAAAAGA
GGAAATAATGCTCATTGCATCGCAAGTCAGCGTTCGGGTTATTTTCGTCGCATCATTTGAACACTACCAGCTTTCCAGAA
GCAAAGACGAGAACTGGGTATACGTTGATCCTCATAAAGAAGCGGCAGACTTATATATCGCAAACCATGTGAGATCGGGA
GACGTCGTAGTCACGCAGGATATCGGTTTAGCCTCTCTTTTGCTGAACAGAAATATTGCCGTCTTATCGGAAAGGGGCCG
TTCTTATACTGAAGACACGATTGACTTCGCTCTGATGAGCCGTCATATGTCAGGCAAAATGAGAAGAAGCGGCATTCATT
CCAAAGGACCTAAAAAATTAAATAAAGAAGATCGGAATCGATTTGTTACCCTGCTTAAAAAAATCCTGTCGAATGATGAA
GGGATTTCAAATCAAAACATCGAATAA

Upstream 100 bases:

>100_bases
AGATGTCAAGAATAACTCCCGGAAATTTTTCGACAAAGCTCAAAATAGATCCGCAGTCATGGAGCATATGCGATTTCGCT
TGTTTTTATGCAGGAGATTG

Downstream 100 bases:

>100_bases
TGTACGACGGAGTGTTATAAGATGGGAAACCGCATACCAGATGAAGTAGTTAATCAGGTGCAGCAGTCAGCAGACATTGT
TGAAGTCATAGGTGATTATG

Product: YqxD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MEGWRISLLNEKEKTIFVDADACPVKEEIMLIASQVSVRVIFVASFEHYQLSRSKDENWVYVDPHKEAADLYIANHVRSG
DVVVTQDIGLASLLLNRNIAVLSERGRSYTEDTIDFALMSRHMSGKMRRSGIHSKGPKKLNKEDRNRFVTLLKKILSNDE
GISNQNIE

Sequences:

>Translated_168_residues
MEGWRISLLNEKEKTIFVDADACPVKEEIMLIASQVSVRVIFVASFEHYQLSRSKDENWVYVDPHKEAADLYIANHVRSG
DVVVTQDIGLASLLLNRNIAVLSERGRSYTEDTIDFALMSRHMSGKMRRSGIHSKGPKKLNKEDRNRFVTLLKKILSNDE
GISNQNIE
>Mature_168_residues
MEGWRISLLNEKEKTIFVDADACPVKEEIMLIASQVSVRVIFVASFEHYQLSRSKDENWVYVDPHKEAADLYIANHVRSG
DVVVTQDIGLASLLLNRNIAVLSERGRSYTEDTIDFALMSRHMSGKMRRSGIHSKGPKKLNKEDRNRFVTLLKKILSNDE
GISNQNIE

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family

Homologues:

Organism=Escherichia coli, GI87081732, Length=142, Percent_Identity=34.5070422535211, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2353_BACA2 (A7Z6T7)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001421944.1
- STRING:   A7Z6T7
- EnsemblBacteria:   EBBACT00000006969
- GeneID:   5460978
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_023530
- eggNOG:   COG1671
- GeneTree:   EBGT00050000002200
- HOGENOM:   HBG363074
- OMA:   HIIAYAR
- ProtClustDB:   CLSK887593
- BioCyc:   BAMY326423:RBAM_023530-MONOMER
- HAMAP:   MF_00489
- InterPro:   IPR003791

Pfam domain/function: PF02639 DUF188

EC number: NA

Molecular weight: Translated: 19148; Mature: 19148

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGWRISLLNEKEKTIFVDADACPVKEEIMLIASQVSVRVIFVASFEHYQLSRSKDENWV
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEEECCCCEECCCCCCCCEE
YVDPHKEAADLYIANHVRSGDVVVTQDIGLASLLLNRNIAVLSERGRSYTEDTIDFALMS
EECCCCCCHHEEEECCCCCCCEEEECCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
RHMSGKMRRSGIHSKGPKKLNKEDRNRFVTLLKKILSNDEGISNQNIE
HHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEGWRISLLNEKEKTIFVDADACPVKEEIMLIASQVSVRVIFVASFEHYQLSRSKDENWV
CCCEEEEEECCCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEEECCCCEECCCCCCCCEE
YVDPHKEAADLYIANHVRSGDVVVTQDIGLASLLLNRNIAVLSERGRSYTEDTIDFALMS
EECCCCCCHHEEEECCCCCCCEEEECCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHH
RHMSGKMRRSGIHSKGPKKLNKEDRNRFVTLLKKILSNDEGISNQNIE
HHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA