| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is yqgE [H]
Identifier: 154686763
GI number: 154686763
Start: 2454705
End: 2455994
Strand: Reverse
Name: yqgE [H]
Synonym: RBAM_023330
Alternate gene names: 154686763
Gene position: 2455994-2454705 (Counterclockwise)
Preceding gene: 154686764
Following gene: 154686762
Centisome position: 62.68
GC content: 45.12
Gene sequence:
>1290_bases ATGAGCAAAATAAAAAAAATTATCGGCGACATCGAAATAAATAAAGGGCTGCTGCTGTTATTGACGATTGGCGGCCTTTA CTCATTGGGCATCGCGCTGTCAAATACATTTGTCAACGTGTATTTGTGGAAGCAGTCGGGAAAATTTATTGATTTGGCCA TATACAATTTGTCGGTCGTGACGATGCAGCCGGTTACCTTTCTGCTGGCTGGCCGGCTGGCTAAAAAAATTGACAGGGTG TTTATTCTAAGGTTCGGCGTTATCTTTTTGGCCGCTTTTTATTTAAGTGTGCTGCTTGCCGGAGAAACTGCGGCTTCCCG TCTCGTTTTGATAGGGGCCGTGCTCGGAGTTGGATACGGCTTTTACTGGCTGGCTTTTAATGTGCTGACTTTCGAAATCA CGGAACCGGAAACGAGAGATTTTTTTAACGGGTTTTTAGGCATTTTGTCTTCATCGGCGGGCATGATCGGTCCGATTGTG GCCGGATATGTCATTTCAAGACTTGAAAACAATACGGGTTATACAATCATTTTCAGCCTGTCGCTCGGCTTATTTGCCCT TGCCGTGGTCATGAGCTTTTTTCTGAAGCGGAGGGAGTCGAAAGGCCGGTTTATGCTGAAAAAAGTTTTTGATGAGCGCC ACACGAATCTGAATTGGCGCCGGATTACCAACGCGCACTTTTTTCAAGGCTTGAGAGAAGGGATTTTTGTTTTTTTAATC AGCGTATTTGTATTCATTGCGACAAACAGTGAGCTGGCGCTCGGAACATTCGGTCTCGTCAATTCCGCGGTTTCTTTTTT TGCCTATTATTTTGCATCAAGGCTCATCAAAAAAAGAGCGCGGAAAAAGGCGATTCTTATCGGCGGATTGATCTTGTACG GCGCCCTGTTTCTCATAATTTTCAAAATGAGCTTCACGACGCTCCTTTTGTACGGAGTGTTTATTGCGATCGGCTATCCA GTTCTGCTCGTGCCGTATGTCTCGCTTACATATGATGTGATAGGACGGGCGCGGCTTGCCAGAAAAGCCAGAATTGAATA CATTGTGCTCAGGGAGTTATTTTTAAATGCGGGCCGGATCGTTTCCATCCTTTGTTTCCTTGTCATCGTTACATTGTTCA AGGAAAAAGTGGGGATACCGGCGGCGCTCGTGCTGCTCGGAGCCGGGCATCCGCTGATTTATTACTTTATAAAAGACATC AAACTGGATACGGAAACTTCTGATGAAACAGTAGAAGAAGACCGACAAAAACAGGCGGCGGAACCGAATTTTATAAAAGG AGAAAGATAA
Upstream 100 bases:
>100_bases GGTCTCCCGCGGGAGGCCTTGTTTTTTTATTGACTTTGATTCCTTTTACATATCTCAGTTTGAGTGAGACAAACTAATGT GTAGTAAAGGGGAGTCAATG
Downstream 100 bases:
>100_bases AAGGGTTATCTGTAGAAAAATATCGAAAAAACCTTTAGAATGAAAAATGGCACCTGAACAGAAGGTGTCATTTCTTTCTG TAAATAAGAAAAGGTGATGT
Product: YqgE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MSKIKKIIGDIEINKGLLLLLTIGGLYSLGIALSNTFVNVYLWKQSGKFIDLAIYNLSVVTMQPVTFLLAGRLAKKIDRV FILRFGVIFLAAFYLSVLLAGETAASRLVLIGAVLGVGYGFYWLAFNVLTFEITEPETRDFFNGFLGILSSSAGMIGPIV AGYVISRLENNTGYTIIFSLSLGLFALAVVMSFFLKRRESKGRFMLKKVFDERHTNLNWRRITNAHFFQGLREGIFVFLI SVFVFIATNSELALGTFGLVNSAVSFFAYYFASRLIKKRARKKAILIGGLILYGALFLIIFKMSFTTLLLYGVFIAIGYP VLLVPYVSLTYDVIGRARLARKARIEYIVLRELFLNAGRIVSILCFLVIVTLFKEKVGIPAALVLLGAGHPLIYYFIKDI KLDTETSDETVEEDRQKQAAEPNFIKGER
Sequences:
>Translated_429_residues MSKIKKIIGDIEINKGLLLLLTIGGLYSLGIALSNTFVNVYLWKQSGKFIDLAIYNLSVVTMQPVTFLLAGRLAKKIDRV FILRFGVIFLAAFYLSVLLAGETAASRLVLIGAVLGVGYGFYWLAFNVLTFEITEPETRDFFNGFLGILSSSAGMIGPIV AGYVISRLENNTGYTIIFSLSLGLFALAVVMSFFLKRRESKGRFMLKKVFDERHTNLNWRRITNAHFFQGLREGIFVFLI SVFVFIATNSELALGTFGLVNSAVSFFAYYFASRLIKKRARKKAILIGGLILYGALFLIIFKMSFTTLLLYGVFIAIGYP VLLVPYVSLTYDVIGRARLARKARIEYIVLRELFLNAGRIVSILCFLVIVTLFKEKVGIPAALVLLGAGHPLIYYFIKDI KLDTETSDETVEEDRQKQAAEPNFIKGER >Mature_428_residues SKIKKIIGDIEINKGLLLLLTIGGLYSLGIALSNTFVNVYLWKQSGKFIDLAIYNLSVVTMQPVTFLLAGRLAKKIDRVF ILRFGVIFLAAFYLSVLLAGETAASRLVLIGAVLGVGYGFYWLAFNVLTFEITEPETRDFFNGFLGILSSSAGMIGPIVA GYVISRLENNTGYTIIFSLSLGLFALAVVMSFFLKRRESKGRFMLKKVFDERHTNLNWRRITNAHFFQGLREGIFVFLIS VFVFIATNSELALGTFGLVNSAVSFFAYYFASRLIKKRARKKAILIGGLILYGALFLIIFKMSFTTLLLYGVFIAIGYPV LLVPYVSLTYDVIGRARLARKARIEYIVLRELFLNAGRIVSILCFLVIVTLFKEKVGIPAALVLLGAGHPLIYYFIKDIK LDTETSDETVEEDRQKQAAEPNFIKGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48016; Mature: 47885
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIKKIIGDIEINKGLLLLLTIGGLYSLGIALSNTFVNVYLWKQSGKFIDLAIYNLSVV CCHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEEEEEEE TMQPVTFLLAGRLAKKIDRVFILRFGVIFLAAFYLSVLLAGETAASRLVLIGAVLGVGYG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FYWLAFNVLTFEITEPETRDFFNGFLGILSSSAGMIGPIVAGYVISRLENNTGYTIIFSL HHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEH SLGLFALAVVMSFFLKRRESKGRFMLKKVFDERHTNLNWRRITNAHFFQGLREGIFVFLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHHHHHH SVFVFIATNSELALGTFGLVNSAVSFFAYYFASRLIKKRARKKAILIGGLILYGALFLII HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKMSFTTLLLYGVFIAIGYPVLLVPYVSLTYDVIGRARLARKARIEYIVLRELFLNAGRI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VSILCFLVIVTLFKEKVGIPAALVLLGAGHPLIYYFIKDIKLDTETSDETVEEDRQKQAA HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEHHHEECCCCCHHHHHHHHHHHCC EPNFIKGER CCCCCCCCC >Mature Secondary Structure SKIKKIIGDIEINKGLLLLLTIGGLYSLGIALSNTFVNVYLWKQSGKFIDLAIYNLSVV CHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHCCEEEEEEEECCCCEEEEEEEEEEEE TMQPVTFLLAGRLAKKIDRVFILRFGVIFLAAFYLSVLLAGETAASRLVLIGAVLGVGYG EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FYWLAFNVLTFEITEPETRDFFNGFLGILSSSAGMIGPIVAGYVISRLENNTGYTIIFSL HHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEH SLGLFALAVVMSFFLKRRESKGRFMLKKVFDERHTNLNWRRITNAHFFQGLREGIFVFLI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHHHHHH SVFVFIATNSELALGTFGLVNSAVSFFAYYFASRLIKKRARKKAILIGGLILYGALFLII HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKMSFTTLLLYGVFIAIGYPVLLVPYVSLTYDVIGRARLARKARIEYIVLRELFLNAGRI HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VSILCFLVIVTLFKEKVGIPAALVLLGAGHPLIYYFIKDIKLDTETSDETVEEDRQKQAA HHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEHHHEECCCCCHHHHHHHHHHHCC EPNFIKGER CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]