Definition Bacillus amyloliquefaciens FZB42, complete genome.
Accession NC_009725
Length 3,918,589

Click here to switch to the map view.

The map label for this gene is yqhR [H]

Identifier: 154686711

GI number: 154686711

Start: 2413708

End: 2414238

Strand: Reverse

Name: yqhR [H]

Synonym: RBAM_022800

Alternate gene names: 154686711

Gene position: 2414238-2413708 (Counterclockwise)

Preceding gene: 154686714

Following gene: 154686710

Centisome position: 61.61

GC content: 43.69

Gene sequence:

>531_bases
ATGACAAGCGAAAAACATTCAGAACAGGAAGAAAAAAAGAAGCAGGATGATGATCAGCAGCCTGTTTCATTTACCGGCAG
AATTTGCGGTATCGGATTTGCCGGCGGTGTATTTTGGAGTTTGATCGGCTATCTCGGGTATGTCTTTCATTTTTCAGAGA
TCAGCCCCAACATGATTCTTCAGCCGTTTATGATCGGAGAATGGAAAAAACAATGGCTCGGCACGATGGTCAGCATCGTT
GTCATCGGATTCATTTCAATTGCCGGGGCGTTTATTTATTTCGTCTGCCTGAAGCGTTTTAAAACCATGTGGCCGGGGAT
GGTGTACGGCGTCATTTTATGGTGTGCGGTTTTTTTCTTATTCAATCCGATTTTCGAAGATGTGAAATCCGTCACTGAAT
TGAAATCAGATACAATCGTGACGACGCTTTGCCTTTACATTCTGTACGGTTTGTTTGTCGGCTACTCAATTTCCTTCAAC
TACAATGAACTTACGTCAGACAAGCTTGCAAGGGCGCTTGGCAACAAGTGA

Upstream 100 bases:

>100_bases
GTATACCCCGTTTCTTTAGATTTTACTCATTGAATGAAAATATGGCGCAGTTTTTTATGACTTTTCAATTTTGGGGCAGT
CTATGACTGGAGGTGCCATG

Downstream 100 bases:

>100_bases
ATAAGTGTATAATCCCTGTCCGGTATGGTAAAATGTTCACGAGAAGTGAACATTTTTTATGCTGAAAACCGGGCGGGGAT
GCTCCCGCGTTGTCAGGCGG

Product: YqhR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MTSEKHSEQEEKKKQDDDQQPVSFTGRICGIGFAGGVFWSLIGYLGYVFHFSEISPNMILQPFMIGEWKKQWLGTMVSIV
VIGFISIAGAFIYFVCLKRFKTMWPGMVYGVILWCAVFFLFNPIFEDVKSVTELKSDTIVTTLCLYILYGLFVGYSISFN
YNELTSDKLARALGNK

Sequences:

>Translated_176_residues
MTSEKHSEQEEKKKQDDDQQPVSFTGRICGIGFAGGVFWSLIGYLGYVFHFSEISPNMILQPFMIGEWKKQWLGTMVSIV
VIGFISIAGAFIYFVCLKRFKTMWPGMVYGVILWCAVFFLFNPIFEDVKSVTELKSDTIVTTLCLYILYGLFVGYSISFN
YNELTSDKLARALGNK
>Mature_175_residues
TSEKHSEQEEKKKQDDDQQPVSFTGRICGIGFAGGVFWSLIGYLGYVFHFSEISPNMILQPFMIGEWKKQWLGTMVSIVV
IGFISIAGAFIYFVCLKRFKTMWPGMVYGVILWCAVFFLFNPIFEDVKSVTELKSDTIVTTLCLYILYGLFVGYSISFNY
NELTSDKLARALGNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20045; Mature: 19913

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEKHSEQEEKKKQDDDQQPVSFTGRICGIGFAGGVFWSLIGYLGYVFHFSEISPNMIL
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QPFMIGEWKKQWLGTMVSIVVIGFISIAGAFIYFVCLKRFKTMWPGMVYGVILWCAVFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FNPIFEDVKSVTELKSDTIVTTLCLYILYGLFVGYSISFNYNELTSDKLARALGNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSEKHSEQEEKKKQDDDQQPVSFTGRICGIGFAGGVFWSLIGYLGYVFHFSEISPNMIL
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QPFMIGEWKKQWLGTMVSIVVIGFISIAGAFIYFVCLKRFKTMWPGMVYGVILWCAVFFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
FNPIFEDVKSVTELKSDTIVTTLCLYILYGLFVGYSISFNYNELTSDKLARALGNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]