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The map label for this gene is yqhT [H]

Identifier: 154686710

GI number: 154686710

Start: 2412515

End: 2413576

Strand: Reverse

Name: yqhT [H]

Synonym: RBAM_022790

Alternate gene names: 154686710

Gene position: 2413576-2412515 (Counterclockwise)

Preceding gene: 154686711

Following gene: 154686709

Centisome position: 61.59

GC content: 49.15

Gene sequence:

>1062_bases
ATGAAACTTGAGAAATTGCGAAATCTTTTCGGTCAGCTGGATATAGACGGAATGTTGGTGACAAGCTCCGCCAATCTGCA
GTATATGACGGGATTTACGGGTTCGTCAGGCCTTGCGGTCATATCGAAAGAACGTGCGGCATTTATCACGGATTTCCGTT
ACACCGAGCAGGCGAAGACGCAAGTGAAGGGTTTTGACATTATCGAGCACGGCGGAAGCTTAATCCAAACGGCTGCGGAT
ACGATTCTTGAGTACGGCATTAAAAAACTCGGCTTCGAGCAAAACAGCATGACGTACGGAACATATGCATCCTACCAAGC
GGTGCTGCAGGAAGCGGAGATGGTTCCCGTCGCGGATTCCGTTGAAAAGTTGCGCTTGATTAAGTCAAGTGAAGAGATTA
AGATATTAGAGGAAGCTGCGAAGATTGCGGATGATGCGTTTGAACATATTCTGACGTTTATCAAACCGGGCATCTCAGAG
ATTTCAGTTGCAAACGAGCTTGAATTTTATATGAGACGTCAAGGAGCAGACGGCTCTTCCTTTGATATGATCGTCGCCTC
GGGAGTCAGATCCAGCCTTCCCCACGGAGTGGCAAGCGGCAAATTGATTGAAAAGGGAGACTTGGTCACGCTCGATTTCG
GCGCTTATTATAAAGGGTATTGTTCTGATATCACACGCACCGTCGCGGTCGGAGAGCCAAGTGATAAACTGAAAGAGATT
TATCAGGTCGTATACGATGCCCAAGCGCTTGGTGTCCTGCATATTAAACCCGGCATGACGGGAAAAGAAGCGGACGCCCT
GACGAGGGATCACATCACCGCAAAAGGCTACGGACAGTATTTCGGCCATTCGACAGGACACGGGTTCGGAATGGAAGTCC
ATGAATCACCGGGGCTGTCTTTCAGGTCATCGGCCGTTCTTGAGCCGGGCATGGCGGTAACGGTCGAGCCGGGCATATAC
ATACCGGATGTTGGGGGCGCAAGAATCGAAGATGATATCATCATCACTGACGACGGCAACCGGACAATTACGCATTCCCC
TAAAGAATTAATTATTTTGTGA

Upstream 100 bases:

>100_bases
AATGTTCACGAGAAGTGAACATTTTTTATGCTGAAAACCGGGCGGGGATGCTCCCGCGTTGTCAGGCGGCAGTCAAGAAT
CGGCGAGGAGGAGAAAGGGA

Downstream 100 bases:

>100_bases
TCGGAATATAGGAGGACATCAAACATGATTTCAGTTAACGATTTTCGTACAGGACTAACGATTGAAGTAGACGGCGGCAT
TTGGCGCGTCGTTGACTTCC

Product: YqhT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKLEKLRNLFGQLDIDGMLVTSSANLQYMTGFTGSSGLAVISKERAAFITDFRYTEQAKTQVKGFDIIEHGGSLIQTAAD
TILEYGIKKLGFEQNSMTYGTYASYQAVLQEAEMVPVADSVEKLRLIKSSEEIKILEEAAKIADDAFEHILTFIKPGISE
ISVANELEFYMRRQGADGSSFDMIVASGVRSSLPHGVASGKLIEKGDLVTLDFGAYYKGYCSDITRTVAVGEPSDKLKEI
YQVVYDAQALGVLHIKPGMTGKEADALTRDHITAKGYGQYFGHSTGHGFGMEVHESPGLSFRSSAVLEPGMAVTVEPGIY
IPDVGGARIEDDIIITDDGNRTITHSPKELIIL

Sequences:

>Translated_353_residues
MKLEKLRNLFGQLDIDGMLVTSSANLQYMTGFTGSSGLAVISKERAAFITDFRYTEQAKTQVKGFDIIEHGGSLIQTAAD
TILEYGIKKLGFEQNSMTYGTYASYQAVLQEAEMVPVADSVEKLRLIKSSEEIKILEEAAKIADDAFEHILTFIKPGISE
ISVANELEFYMRRQGADGSSFDMIVASGVRSSLPHGVASGKLIEKGDLVTLDFGAYYKGYCSDITRTVAVGEPSDKLKEI
YQVVYDAQALGVLHIKPGMTGKEADALTRDHITAKGYGQYFGHSTGHGFGMEVHESPGLSFRSSAVLEPGMAVTVEPGIY
IPDVGGARIEDDIIITDDGNRTITHSPKELIIL
>Mature_353_residues
MKLEKLRNLFGQLDIDGMLVTSSANLQYMTGFTGSSGLAVISKERAAFITDFRYTEQAKTQVKGFDIIEHGGSLIQTAAD
TILEYGIKKLGFEQNSMTYGTYASYQAVLQEAEMVPVADSVEKLRLIKSSEEIKILEEAAKIADDAFEHILTFIKPGISE
ISVANELEFYMRRQGADGSSFDMIVASGVRSSLPHGVASGKLIEKGDLVTLDFGAYYKGYCSDITRTVAVGEPSDKLKEI
YQVVYDAQALGVLHIKPGMTGKEADALTRDHITAKGYGQYFGHSTGHGFGMEVHESPGLSFRSSAVLEPGMAVTVEPGIY
IPDVGGARIEDDIIITDDGNRTITHSPKELIIL

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M24B family [H]

Homologues:

Organism=Homo sapiens, GI11559925, Length=311, Percent_Identity=29.903536977492, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI149589008, Length=293, Percent_Identity=26.6211604095563, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI260593665, Length=293, Percent_Identity=26.6211604095563, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI260593663, Length=280, Percent_Identity=26.4285714285714, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI93141226, Length=254, Percent_Identity=29.9212598425197, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI264681563, Length=192, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI164420681, Length=269, Percent_Identity=23.7918215613383, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1788728, Length=357, Percent_Identity=41.7366946778711, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1789275, Length=330, Percent_Identity=30.6060606060606, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1786364, Length=207, Percent_Identity=27.0531400966184, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1790282, Length=293, Percent_Identity=23.2081911262799, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17508215, Length=294, Percent_Identity=26.530612244898, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17509539, Length=361, Percent_Identity=25.207756232687, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71996291, Length=233, Percent_Identity=24.8927038626609, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6321118, Length=284, Percent_Identity=26.4084507042254, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320922, Length=253, Percent_Identity=26.8774703557312, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323273, Length=203, Percent_Identity=26.6009852216749, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322999, Length=176, Percent_Identity=30.6818181818182, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920384, Length=289, Percent_Identity=29.0657439446367, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI21357079, Length=292, Percent_Identity=29.7945205479452, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355531, Length=165, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000587
- InterPro:   IPR001714
- InterPro:   IPR000994
- InterPro:   IPR001131 [H]

Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 38387; Mature: 38387

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLEKLRNLFGQLDIDGMLVTSSANLQYMTGFTGSSGLAVISKERAAFITDFRYTEQAKT
CCHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCEEEECCHHHHHHHH
QVKGFDIIEHGGSLIQTAADTILEYGIKKLGFEQNSMTYGTYASYQAVLQEAEMVPVADS
HHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHH
VEKLRLIKSSEEIKILEEAAKIADDAFEHILTFIKPGISEISVANELEFYMRRQGADGSS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
FDMIVASGVRSSLPHGVASGKLIEKGDLVTLDFGAYYKGYCSDITRTVAVGEPSDKLKEI
CHHEEHHHHHHHCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHH
YQVVYDAQALGVLHIKPGMTGKEADALTRDHITAKGYGQYFGHSTGHGFGMEVHESPGLS
HHHHHHHHHCEEEEECCCCCCCHHHHHHHHCEECCCCHHHCCCCCCCCCCEEEECCCCCC
FRSSAVLEPGMAVTVEPGIYIPDVGGARIEDDIIITDDGNRTITHSPKELIIL
CCCCCCCCCCCEEEECCCEEECCCCCCEECCCEEEECCCCEEEECCCCEEEEC
>Mature Secondary Structure
MKLEKLRNLFGQLDIDGMLVTSSANLQYMTGFTGSSGLAVISKERAAFITDFRYTEQAKT
CCHHHHHHHHCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCEEEECCHHHHHHHH
QVKGFDIIEHGGSLIQTAADTILEYGIKKLGFEQNSMTYGTYASYQAVLQEAEMVPVADS
HHCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCCCHHH
VEKLRLIKSSEEIKILEEAAKIADDAFEHILTFIKPGISEISVANELEFYMRRQGADGSS
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
FDMIVASGVRSSLPHGVASGKLIEKGDLVTLDFGAYYKGYCSDITRTVAVGEPSDKLKEI
CHHEEHHHHHHHCCCCCCCCCEEECCCEEEEECCCHHHHHHHHHHHEEECCCCHHHHHHH
YQVVYDAQALGVLHIKPGMTGKEADALTRDHITAKGYGQYFGHSTGHGFGMEVHESPGLS
HHHHHHHHHCEEEEECCCCCCCHHHHHHHHCEECCCCHHHCCCCCCCCCCEEEECCCCCC
FRSSAVLEPGMAVTVEPGIYIPDVGGARIEDDIIITDDGNRTITHSPKELIIL
CCCCCCCCCCCEEEECCCEEECCCCCCEECCCEEEECCCCEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]