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The map label for this gene is mmgC [H]

Identifier: 154686674

GI number: 154686674

Start: 2381194

End: 2382327

Strand: Reverse

Name: mmgC [H]

Synonym: RBAM_022430

Alternate gene names: 154686674

Gene position: 2382327-2381194 (Counterclockwise)

Preceding gene: 154686675

Following gene: 154686673

Centisome position: 60.8

GC content: 49.03

Gene sequence:

>1134_bases
ATGCATTTTACAGAAGAGCACATCATGATGAGAAAAATGGTGCGTGATTTTGCCCGCAAGGAAATCGCGCCGGTGGTTGA
GCTCATGGAATCAACAGATGAATTTCCGGAGCGGCTGATTAAAAAAATGGGCGAAGCGGGATTGATGGGTATTCCCGTCC
CGGAAACTTACGGCGGGGCGGGTGCTGATACAACATCTTACATTTTAGCGATTCATGAAATATCAAAAGTCAGCGCGGCC
GTCGGCGTCATTTTGTCCGTCCACACATCAGTAGGGACAATCCCGATTTTGCATTTCGGGACAGAAGCCCAAAAACAAAC
GTATATTCCGAAGCTGGCAGCGGGCGAATATATTGGGGCTTTTGCGCTTACTGAGCCTCAATCCGGATCTGATGCGGGAG
GCCTGAAAACAACGGCCGTGCGAAAAGGCGGTTCATATATTCTGAACGGTTCAAAAATCTTTATTACAAACGGAGGAGCG
GCAGATCTGTATCTGACATTCGCCATAACCGATCCGGGTAAAGGGAGAAAGGGGATTTCAGCGTTTATCGTTGAAAAAAA
CACACCCGGTTTTTCTGTCGGAAAAAAAGAAAAAAAGCTCGGACTGTTAGGTTCCAATACTGTCGAATTGCAGTTTGACC
AAGCAGAAATTCCGATTGAAAACCGGCTCGGCGAAGAGGGCGAGGGCTTTTCAATCGCCATGAAAAACCTTGACGTCGGA
CGGATCGGCATAGCGGCTCAGGCGCTCGGGATTATCGAAGCGGCGCTCGGCTGCTCGGTGGAGTACGCCAAAACCCGCAG
CCAGTTCGGCAGACCCATCGCTTCGAATCAGGCCGTTTCATTTAAATTATCTGACATGGCGACGAATGCGGAAGCTACCA
AATTATTGGTCTATCATGCTGCTGATCTGTATCAGCGAGGGCTTCCGTGCGGAAAAGAAGCATCTATGGCGAAGCAATTC
GCGTCCGATGCGGCGATGAAAGCGGCGGTGGAGGCTGTGCAGATTCACGGCGGCTACGGCTATATGAAAGAGTATCCCGC
GGAGCGTTTATTTCGGGATGCGAAAGTTACGCAAATCTATGAAGGAACCAATGAGATTCAAAGGCTGATTATTTCTAAGT
ATCTTCTTCAATAA

Upstream 100 bases:

>100_bases
TCAGAAAATATGTCAGCGCCGGCTGGCTCGGCAAAAAAAGCGGGCGCGGTTTTTATGAGTACGGCAGATGACGTAAAGAT
CATGAGGGGAGACGGCAGCC

Downstream 100 bases:

>100_bases
AAAGTGCGCAAAGGAGCGAAACCATGGAATCTTATTCTCCCGGTTTAGATGGCATCATTGCGGTGGAAACGGGGATTTCT
TTCCTGGATACACAGCAGGG

Product: MmgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MHFTEEHIMMRKMVRDFARKEIAPVVELMESTDEFPERLIKKMGEAGLMGIPVPETYGGAGADTTSYILAIHEISKVSAA
VGVILSVHTSVGTIPILHFGTEAQKQTYIPKLAAGEYIGAFALTEPQSGSDAGGLKTTAVRKGGSYILNGSKIFITNGGA
ADLYLTFAITDPGKGRKGISAFIVEKNTPGFSVGKKEKKLGLLGSNTVELQFDQAEIPIENRLGEEGEGFSIAMKNLDVG
RIGIAAQALGIIEAALGCSVEYAKTRSQFGRPIASNQAVSFKLSDMATNAEATKLLVYHAADLYQRGLPCGKEASMAKQF
ASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIYEGTNEIQRLIISKYLLQ

Sequences:

>Translated_377_residues
MHFTEEHIMMRKMVRDFARKEIAPVVELMESTDEFPERLIKKMGEAGLMGIPVPETYGGAGADTTSYILAIHEISKVSAA
VGVILSVHTSVGTIPILHFGTEAQKQTYIPKLAAGEYIGAFALTEPQSGSDAGGLKTTAVRKGGSYILNGSKIFITNGGA
ADLYLTFAITDPGKGRKGISAFIVEKNTPGFSVGKKEKKLGLLGSNTVELQFDQAEIPIENRLGEEGEGFSIAMKNLDVG
RIGIAAQALGIIEAALGCSVEYAKTRSQFGRPIASNQAVSFKLSDMATNAEATKLLVYHAADLYQRGLPCGKEASMAKQF
ASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIYEGTNEIQRLIISKYLLQ
>Mature_377_residues
MHFTEEHIMMRKMVRDFARKEIAPVVELMESTDEFPERLIKKMGEAGLMGIPVPETYGGAGADTTSYILAIHEISKVSAA
VGVILSVHTSVGTIPILHFGTEAQKQTYIPKLAAGEYIGAFALTEPQSGSDAGGLKTTAVRKGGSYILNGSKIFITNGGA
ADLYLTFAITDPGKGRKGISAFIVEKNTPGFSVGKKEKKLGLLGSNTVELQFDQAEIPIENRLGEEGEGFSIAMKNLDVG
RIGIAAQALGIIEAALGCSVEYAKTRSQFGRPIASNQAVSFKLSDMATNAEATKLLVYHAADLYQRGLPCGKEASMAKQF
ASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIYEGTNEIQRLIISKYLLQ

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=377, Percent_Identity=49.0716180371353, Blast_Score=362, Evalue=1e-100,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=42.0911528150134, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=38.1333333333333, Blast_Score=278, Evalue=8e-75,
Organism=Homo sapiens, GI7656849, Length=381, Percent_Identity=39.3700787401575, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI21361497, Length=352, Percent_Identity=42.3295454545455, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=39.7877984084881, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=39.7877984084881, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI226958414, Length=344, Percent_Identity=39.5348837209302, Blast_Score=265, Evalue=5e-71,
Organism=Homo sapiens, GI76496475, Length=373, Percent_Identity=39.4101876675603, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI4557235, Length=373, Percent_Identity=39.4101876675603, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=37.1352785145889, Blast_Score=241, Evalue=5e-64,
Organism=Homo sapiens, GI4503943, Length=375, Percent_Identity=33.0666666666667, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI7669494, Length=363, Percent_Identity=32.7823691460055, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI38505218, Length=383, Percent_Identity=26.3707571801567, Blast_Score=117, Evalue=1e-26,
Organism=Homo sapiens, GI211971008, Length=336, Percent_Identity=28.2738095238095, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI48976061, Length=336, Percent_Identity=28.2738095238095, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI156104866, Length=366, Percent_Identity=26.5027322404372, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI156104864, Length=366, Percent_Identity=26.5027322404372, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI87081958, Length=383, Percent_Identity=29.5039164490862, Blast_Score=162, Evalue=2e-41,
Organism=Escherichia coli, GI1786223, Length=343, Percent_Identity=29.7376093294461, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI87081702, Length=382, Percent_Identity=25.6544502617801, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI87082384, Length=266, Percent_Identity=29.6992481203008, Blast_Score=89, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17508101, Length=374, Percent_Identity=41.9786096256684, Blast_Score=298, Evalue=4e-81,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=38.6666666666667, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI17506239, Length=373, Percent_Identity=36.4611260053619, Blast_Score=275, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI17569725, Length=364, Percent_Identity=41.4835164835165, Blast_Score=275, Evalue=3e-74,
Organism=Caenorhabditis elegans, GI17570075, Length=379, Percent_Identity=37.9947229551451, Blast_Score=271, Evalue=4e-73,
Organism=Caenorhabditis elegans, GI17534899, Length=364, Percent_Identity=40.1098901098901, Blast_Score=265, Evalue=4e-71,
Organism=Caenorhabditis elegans, GI71990804, Length=294, Percent_Identity=45.9183673469388, Blast_Score=251, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI71985184, Length=359, Percent_Identity=38.9972144846797, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17533517, Length=366, Percent_Identity=36.3387978142077, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI71985192, Length=294, Percent_Identity=39.1156462585034, Blast_Score=201, Evalue=8e-52,
Organism=Caenorhabditis elegans, GI17534353, Length=374, Percent_Identity=33.4224598930481, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=36.3636363636364, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17505929, Length=376, Percent_Identity=29.7872340425532, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=33.0855018587361, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17551932, Length=376, Percent_Identity=28.9893617021277, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=31.9502074688797, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17562446, Length=287, Percent_Identity=26.8292682926829, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=271, Percent_Identity=30.6273062730627, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=271, Percent_Identity=30.6273062730627, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531913, Length=179, Percent_Identity=30.7262569832402, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21356377, Length=375, Percent_Identity=48, Blast_Score=352, Evalue=2e-97,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=42.2872340425532, Blast_Score=313, Evalue=2e-85,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=40.2144772117962, Blast_Score=297, Evalue=7e-81,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=39.3139841688654, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=36.0526315789474, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI281363737, Length=369, Percent_Identity=39.0243902439024, Blast_Score=238, Evalue=6e-63,
Organism=Drosophila melanogaster, GI19920834, Length=376, Percent_Identity=32.4468085106383, Blast_Score=187, Evalue=7e-48,
Organism=Drosophila melanogaster, GI45550141, Length=329, Percent_Identity=26.7477203647416, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI221473076, Length=329, Percent_Identity=26.7477203647416, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40558; Mature: 40558

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHFTEEHIMMRKMVRDFARKEIAPVVELMESTDEFPERLIKKMGEAGLMGIPVPETYGGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
GADTTSYILAIHEISKVSAAVGVILSVHTSVGTIPILHFGTEAQKQTYIPKLAAGEYIGA
CCCCHHHEEHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCHHHHHCCCCHHCCCCCEE
FALTEPQSGSDAGGLKTTAVRKGGSYILNGSKIFITNGGAADLYLTFAITDPGKGRKGIS
EEECCCCCCCCCCCCEEEEEECCCCEEEECCEEEEECCCCEEEEEEEEEECCCCCCCCCE
AFIVEKNTPGFSVGKKEKKLGLLGSNTVELQFDQAEIPIENRLGEEGEGFSIAMKNLDVG
EEEEECCCCCCCCCCCHHHEEEECCCEEEEEECCCCCCHHHCCCCCCCCEEEEEECCCCC
RIGIAAQALGIIEAALGCSVEYAKTRSQFGRPIASNQAVSFKLSDMATNAEATKLLVYHA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCHHEEEEHHH
ADLYQRGLPCGKEASMAKQFASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCHHHHHHHHHHHHHH
EGTNEIQRLIISKYLLQ
CCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHFTEEHIMMRKMVRDFARKEIAPVVELMESTDEFPERLIKKMGEAGLMGIPVPETYGGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
GADTTSYILAIHEISKVSAAVGVILSVHTSVGTIPILHFGTEAQKQTYIPKLAAGEYIGA
CCCCHHHEEHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCHHHHHCCCCHHCCCCCEE
FALTEPQSGSDAGGLKTTAVRKGGSYILNGSKIFITNGGAADLYLTFAITDPGKGRKGIS
EEECCCCCCCCCCCCEEEEEECCCCEEEECCEEEEECCCCEEEEEEEEEECCCCCCCCCE
AFIVEKNTPGFSVGKKEKKLGLLGSNTVELQFDQAEIPIENRLGEEGEGFSIAMKNLDVG
EEEEECCCCCCCCCCCHHHEEEECCCEEEEEECCCCCCHHHCCCCCCCCEEEEEECCCCC
RIGIAAQALGIIEAALGCSVEYAKTRSQFGRPIASNQAVSFKLSDMATNAEATKLLVYHA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHCCCCCHHEEEEHHH
ADLYQRGLPCGKEASMAKQFASDAAMKAAVEAVQIHGGYGYMKEYPAERLFRDAKVTQIY
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHCCHHHHHHHHHHHHHH
EGTNEIQRLIISKYLLQ
CCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]