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The map label for this gene is drm [H]

Identifier: 154686592

GI number: 154686592

Start: 2250296

End: 2251483

Strand: Reverse

Name: drm [H]

Synonym: RBAM_021610

Alternate gene names: 154686592

Gene position: 2251483-2250296 (Counterclockwise)

Preceding gene: 154686593

Following gene: 154686591

Centisome position: 57.46

GC content: 49.92

Gene sequence:

>1188_bases
ATGATGTCTGAATACAAATATAACCGGGTATTTTTGATCGTAATGGATTCTGTCGGAATCGGTGAAGCGCCGGACGCCGC
CGATTTTAATGATATAGGCGCAAATACGCTCGGACACATCGCAGAGCACATGAACGGCTTACATATGCCCCATTTGGCGC
AGCTCGGTCTCGGACTGATCGGAGACATTAAGGGCGTGGAAAAAACGGAGCACCCTCTTGCGTACTACGGAAAAATGCAG
GAGGCGTCAAACGGGAAAGATACGATGACGGGGCACTGGGAGATTATGGGCCTCTACATTGAAAAACCGTTTAAAGTGTT
CCCGGAAGGATTTCCGGATGAACTTCTTCAGGAACTTGAGCGGCGTTCAGGACGGAAAATCATCGGAAATAAGCCGGCTT
CAGGCACGGCGATTCTGGACGAGCTCGGAAAAGAACATATGGAAACGGGTGCGCTGATCGTTTATACATCAGCAGATTCC
GTGCTGCAGATTGCGGCTCACGAAGATGTCGTTCCGCTTGACGAACTGTACAGCATCTGTGAAACGGCCAGAGAACTGAC
GCTTGATCCGAAATACATGGTCGGCCGGATTATCGCAAGACCGTTCGTCGGAGAACCGGGCAGCTTCAAACGCACGCCGA
ACCGTCATGATTATGCGCTCAAACCGTTCGGCCGCACGGTAATGAACGGAATGAAAGACAGCGGATTAGACGTCATTTCT
ATCGGCAAAATTTCTGATATTTATGACGGAGAAGGCATTACATCTTCCCGCCGCACGGTATCTAATATGGACGGCATGGA
CAAAGTGATTGAAACGCTCGGTGAAGAGTTTACGGGCCTGAGCTTTGCCAATCTCGTTGATTTTGACGCGCTGTACGGAC
ACCGCCGCGATCCGGAAGGGTACGGAAAAGCGCTCGAGGAATTCGACGCGAGGCTTCCGGAAGTGTTTGAGAAAATGAAA
GAAGACGATCTGCTTATCATCACTGCGGATCACGGCAATGATCCTGTCCATCACGGCACGGATCACACGAGGGAGTATGT
GCCGCTTCTTGTGTACAGCAAAAAGCACAAACACACTGAACAGCTGCCGCTTGCGGATACATTTGCCGATATCGGCGCAA
CCATTGCGGATAATTTCAAAACGGAAAAGCCGAAATACGGAAAAAGCTTTTTATCAAGATTACAGTAG

Upstream 100 bases:

>100_bases
TATTTGAATCGGCATTGTCAACAAGAATGTAAACGGTTTATACTTGAGTTGTCTGACCTCTGTAAGCTACAATGGACAGA
TGGAAGAAAAGGAGGCTTTT

Downstream 100 bases:

>100_bases
GGGGACTTTTTTTGAAACAAAAGATCGAACGTGCTGCTGCATTTATTAAAGAACACGTGAAAGAAACACCAAAGATCGGT
CTGATTTTAGGGTCAGGGCT

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MMSEYKYNRVFLIVMDSVGIGEAPDAADFNDIGANTLGHIAEHMNGLHMPHLAQLGLGLIGDIKGVEKTEHPLAYYGKMQ
EASNGKDTMTGHWEIMGLYIEKPFKVFPEGFPDELLQELERRSGRKIIGNKPASGTAILDELGKEHMETGALIVYTSADS
VLQIAAHEDVVPLDELYSICETARELTLDPKYMVGRIIARPFVGEPGSFKRTPNRHDYALKPFGRTVMNGMKDSGLDVIS
IGKISDIYDGEGITSSRRTVSNMDGMDKVIETLGEEFTGLSFANLVDFDALYGHRRDPEGYGKALEEFDARLPEVFEKMK
EDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHKHTEQLPLADTFADIGATIADNFKTEKPKYGKSFLSRLQ

Sequences:

>Translated_395_residues
MMSEYKYNRVFLIVMDSVGIGEAPDAADFNDIGANTLGHIAEHMNGLHMPHLAQLGLGLIGDIKGVEKTEHPLAYYGKMQ
EASNGKDTMTGHWEIMGLYIEKPFKVFPEGFPDELLQELERRSGRKIIGNKPASGTAILDELGKEHMETGALIVYTSADS
VLQIAAHEDVVPLDELYSICETARELTLDPKYMVGRIIARPFVGEPGSFKRTPNRHDYALKPFGRTVMNGMKDSGLDVIS
IGKISDIYDGEGITSSRRTVSNMDGMDKVIETLGEEFTGLSFANLVDFDALYGHRRDPEGYGKALEEFDARLPEVFEKMK
EDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHKHTEQLPLADTFADIGATIADNFKTEKPKYGKSFLSRLQ
>Mature_395_residues
MMSEYKYNRVFLIVMDSVGIGEAPDAADFNDIGANTLGHIAEHMNGLHMPHLAQLGLGLIGDIKGVEKTEHPLAYYGKMQ
EASNGKDTMTGHWEIMGLYIEKPFKVFPEGFPDELLQELERRSGRKIIGNKPASGTAILDELGKEHMETGALIVYTSADS
VLQIAAHEDVVPLDELYSICETARELTLDPKYMVGRIIARPFVGEPGSFKRTPNRHDYALKPFGRTVMNGMKDSGLDVIS
IGKISDIYDGEGITSSRRTVSNMDGMDKVIETLGEEFTGLSFANLVDFDALYGHRRDPEGYGKALEEFDARLPEVFEKMK
EDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHKHTEQLPLADTFADIGATIADNFKTEKPKYGKSFLSRLQ

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose [H]

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family [H]

Homologues:

Organism=Escherichia coli, GI1790843, Length=406, Percent_Identity=46.0591133004926, Blast_Score=317, Evalue=9e-88,
Organism=Escherichia coli, GI1789781, Length=429, Percent_Identity=28.6713286713287, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124 [H]

Pfam domain/function: PF01676 Metalloenzyme [H]

EC number: =5.4.2.7 [H]

Molecular weight: Translated: 43965; Mature: 43965

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSEYKYNRVFLIVMDSVGIGEAPDAADFNDIGANTLGHIAEHMNGLHMPHLAQLGLGLI
CCCCCCCCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHCCHHH
GDIKGVEKTEHPLAYYGKMQEASNGKDTMTGHWEIMGLYIEKPFKVFPEGFPDELLQELE
HCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCHHHHHHHH
RRSGRKIIGNKPASGTAILDELGKEHMETGALIVYTSADSVLQIAAHEDVVPLDELYSIC
HHCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHH
ETARELTLDPKYMVGRIIARPFVGEPGSFKRTPNRHDYALKPFGRTVMNGMKDSGLDVIS
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCEEE
IGKISDIYDGEGITSSRRTVSNMDGMDKVIETLGEEFTGLSFANLVDFDALYGHRRDPEG
ECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
YGKALEEFDARLPEVFEKMKEDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHKHTE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHCEEEEEECCCCCCC
QLPLADTFADIGATIADNFKTEKPKYGKSFLSRLQ
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MMSEYKYNRVFLIVMDSVGIGEAPDAADFNDIGANTLGHIAEHMNGLHMPHLAQLGLGLI
CCCCCCCCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHCCHHH
GDIKGVEKTEHPLAYYGKMQEASNGKDTMTGHWEIMGLYIEKPFKVFPEGFPDELLQELE
HCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCHHHHHHHH
RRSGRKIIGNKPASGTAILDELGKEHMETGALIVYTSADSVLQIAAHEDVVPLDELYSIC
HHCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHH
ETARELTLDPKYMVGRIIARPFVGEPGSFKRTPNRHDYALKPFGRTVMNGMKDSGLDVIS
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCCCCCEEE
IGKISDIYDGEGITSSRRTVSNMDGMDKVIETLGEEFTGLSFANLVDFDALYGHRRDPEG
ECCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHH
YGKALEEFDARLPEVFEKMKEDDLLIITADHGNDPVHHGTDHTREYVPLLVYSKKHKHTE
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHCEEEEEECCCCCCC
QLPLADTFADIGATIADNFKTEKPKYGKSFLSRLQ
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10537218; 8969508; 9384377 [H]