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The map label for this gene is scpA

Identifier: 154686567

GI number: 154686567

Start: 2230378

End: 2231133

Strand: Reverse

Name: scpA

Synonym: RBAM_021360

Alternate gene names: 154686567

Gene position: 2231133-2230378 (Counterclockwise)

Preceding gene: 154686569

Following gene: 154686566

Centisome position: 56.94

GC content: 41.8

Gene sequence:

>756_bases
ATGGTAGAATATCAAGTGAAAATTGATACGTTTGAAGGCCCATTGGACCTGCTGCTTCATCTGATTAACCGTCTTGAAAT
CGACATATACGACATACCCGTGGCAACCATTACTGAACAATATTTATTATATGTACATACAATGCAAGAGCTTGAACTTG
ATGTCGCCAGTGAATATCTGGTCATGGCGGCGACGCTTCTCAGCATTAAAAGCAGAATGCTGCTTCCGAAACAAGAAGAA
GAGCTGTTTGAAGACGAAATGCTTGAAGAAGAAGACCCTCGGGACGAGCTGATTGAAAAGCTGATTGAGTATAGAAAGTA
TAAAACCGCTGCGAAGGATTTAAAAGAGCGGGAAGAAGAAAGACAAAAGTCATTTACAAAGCCGCCGAGTGATTTAAGTG
AGTATGCAAAAGAAATCAAACAGACGGAGCAGAAGCTGTCGGTGACCGTTTATGACATGATCGGCGCGTTTCAAAAGGTG
CTTCAGCGTAAAAAAATCACGCGGCCGAAAGAAACGACCATTACAAGACAGGAAATACCGATTGAAGACAGAATGAACGA
AATCGTAAAAAGCTTAAAAACGGCGGGGAGAAGAATAAACTTCACGGAGCTTTTTCCTTCTCGGCAAAAGGACCATCTCG
TCGTGACGTTTTTAGCAGTCCTGGAACTGATGAAAAATCAGCAGATTATCATTGAACAGGAAGAAAACTTTTCAGATATA
TACATTACGGGGAGTGAATCCATTCATGGCGCTTGA

Upstream 100 bases:

>100_bases
GGACGTGTATAAAAGTATTGGACGAGAGCATTTCGGTGGATTATACTAAAGGGTAGCCAGTTTTTCCGGCAATGAGAGTG
ATATTGAAAATGGTGAGATA

Downstream 100 bases:

>100_bases
TATCGTGAATTGGAAAGCGATTGTGGAAGCCCTGCTGTATGCGGCGGGTGATGAAGGGCTGACCAAAAAGCAATTGGTGA
CGGTGCTTGAAATAGAAGAA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MVEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVATITEQYLLYVHTMQELELDVASEYLVMAATLLSIKSRMLLPKQEE
ELFEDEMLEEEDPRDELIEKLIEYRKYKTAAKDLKEREEERQKSFTKPPSDLSEYAKEIKQTEQKLSVTVYDMIGAFQKV
LQRKKITRPKETTITRQEIPIEDRMNEIVKSLKTAGRRINFTELFPSRQKDHLVVTFLAVLELMKNQQIIIEQEENFSDI
YITGSESIHGA

Sequences:

>Translated_251_residues
MVEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVATITEQYLLYVHTMQELELDVASEYLVMAATLLSIKSRMLLPKQEE
ELFEDEMLEEEDPRDELIEKLIEYRKYKTAAKDLKEREEERQKSFTKPPSDLSEYAKEIKQTEQKLSVTVYDMIGAFQKV
LQRKKITRPKETTITRQEIPIEDRMNEIVKSLKTAGRRINFTELFPSRQKDHLVVTFLAVLELMKNQQIIIEQEENFSDI
YITGSESIHGA
>Mature_251_residues
MVEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVATITEQYLLYVHTMQELELDVASEYLVMAATLLSIKSRMLLPKQEE
ELFEDEMLEEEDPRDELIEKLIEYRKYKTAAKDLKEREEERQKSFTKPPSDLSEYAKEIKQTEQKLSVTVYDMIGAFQKV
LQRKKITRPKETTITRQEIPIEDRMNEIVKSLKTAGRRINFTELFPSRQKDHLVVTFLAVLELMKNQQIIIEQEENFSDI
YITGSESIHGA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SCPA_BACA2 (A7Z671)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001421728.1
- STRING:   A7Z671
- EnsemblBacteria:   EBBACT00000004321
- GeneID:   5462554
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_021360
- eggNOG:   COG1354
- GeneTree:   EBGT00050000002600
- HOGENOM:   HBG728383
- OMA:   IRKQNID
- ProtClustDB:   PRK00104
- BioCyc:   BAMY326423:RBAM_021360-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01805
- InterPro:   IPR003768

Pfam domain/function: PF02616 ScpA_ScpB

EC number: NA

Molecular weight: Translated: 29520; Mature: 29520

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVATITEQYLLYVHTMQELELDVASEYL
CCEEEEEEECCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLSIKSRMLLPKQEEELFEDEMLEEEDPRDELIEKLIEYRKYKTAAKDLKEREEE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKSFTKPPSDLSEYAKEIKQTEQKLSVTVYDMIGAFQKVLQRKKITRPKETTITRQEIP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHCCC
IEDRMNEIVKSLKTAGRRINFTELFPSRQKDHLVVTFLAVLELMKNQQIIIEQEENFSDI
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEE
YITGSESIHGA
EEECCCCCCCC
>Mature Secondary Structure
MVEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVATITEQYLLYVHTMQELELDVASEYL
CCEEEEEEECCCCHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMAATLLSIKSRMLLPKQEEELFEDEMLEEEDPRDELIEKLIEYRKYKTAAKDLKEREEE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQKSFTKPPSDLSEYAKEIKQTEQKLSVTVYDMIGAFQKVLQRKKITRPKETTITRQEIP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHCCC
IEDRMNEIVKSLKTAGRRINFTELFPSRQKDHLVVTFLAVLELMKNQQIIIEQEENFSDI
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEE
YITGSESIHGA
EEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA