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The map label for this gene is ypeB [H]

Identifier: 154686538

GI number: 154686538

Start: 2203160

End: 2204509

Strand: Reverse

Name: ypeB [H]

Synonym: RBAM_021070

Alternate gene names: 154686538

Gene position: 2204509-2203160 (Counterclockwise)

Preceding gene: 154686539

Following gene: 154686537

Centisome position: 56.26

GC content: 44.52

Gene sequence:

>1350_bases
ATGATTAGAGGAATCATTATCGCTGTTCTCGGTGTCGCGATCGCCGCAACCGGATACTGGGGATATAAAGAGCATCAGGA
AAAAGATGCGGTCCTTCTGCATGCGGAAAATAATTATCAGAGGGCTTTTCATGAATTGACGTACCATGTAGATCAGCTTC
ACGACAAAATCGGGACGACGCTTGCGATGAACAGTAAAAAATCTCTGTCTCCGGCGCTCATTGATGTATGGAGAATAACA
TCTGAAGCTCATAACAATGTGAGCCAGCTGCCCCTGACTCTCATGCCTTTTAATAAGACGGAGGAGTTTTTATCCAACAT
AGGAGATTTCAGCTATAAAACATCCGTCCGGGATTTAGACCAAAAACCGCTTGATAAGAAAGAATATACAACACTGAACA
GCCTGTACAAACAGGCGGAGAACATTCAAAACCAGCTCCGCAGCGTTCAGCATCTCGTCATGAGCAAAAATTTACGGTGG
ATGGATGTTGAGATGGCGCTCGCCTCTGACAAAAAACAAAGCGATAATACGATCGTCGACAGCTTTAAAACAGTCGAAAA
AAATGTAGGCGCTTTTTCTGAAGACAGCATCAGCCCCACATTTACGGGAGCAAATACAGAACGAAAAGGTTTTACGCATC
TGAAAGGAAAACAAATTACGGAAAAAGAAGCGGTCAAAATCGCACAACGGTTTGCGCCTGATCATAATTATTCAATTAAA
GTGGTCAAAAGCGGCAGGAAAACGAATCGGGACGTATACAGCATCCGCATGAAAGACGCGGACAACAAGTCTTTTATCTA
TATGGATATTACCCAAAAAGGCGGACATCCGGTCTATTTGATTCAAAAACGGGCCGTGAAGAAACAAAAGATCAGCCTCA
ATGAAGCATCTAACCGGGCCGTCGCGTTTTTAAAGAAAAATGGATATGAAACAAAAGGCCTCGAAATTGATGAAAGCGCG
CAATATAATAACATCGGCGTCTTTTCTTTTATCCCCGTGGAGAAAAATGTCCGCATTTATCCGGAAGCCATCCGAATGAA
AGTGGCGCTGGATGATGGTGAAGTCGTCGGTTTTTCCGCGCGTGATTACCTGGCCGCGCACCGCACGAGAACGATTCCGG
CTCCCGCTTTGTCAGCTGATGAAGCGAAAGCGAAGCTGAATAAAAATGTTGAAGTGCGGGAGACCCGGCAGGCGCTGATC
ACGAATGAGCTCGGTCAGGAAGTGCTTTGCTACGAAATGCTCGGGACGATCGGGAAAGACACGTATCAAATGTTCATTAA
TGCGGACGACGGAAAAGAGGAAAAAATAGAAAAGTTAAAAAGTGCAGAACCTATATATAAAGACCTATAA

Upstream 100 bases:

>100_bases
TGATACGGCGACAAGCAAATGGATTTGGGGACGTCCGCAGATTAAAAGAATCGGAAAGCACATTTTCTGTGAGTAAAAGT
ACGCAAAATGAGGTGTTAAC

Downstream 100 bases:

>100_bases
AAATAAAGGAGGAAAGGACTAAAAGTCTTTTCCTTTTTTTCGTTACATGCTTTAATAAAAGCATAAATAATGAAAGAGTG
AAGGCCCATGATAGCTGTCG

Product: YpeB

Products: NA

Alternate protein names: PSPA12 [H]

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MIRGIIIAVLGVAIAATGYWGYKEHQEKDAVLLHAENNYQRAFHELTYHVDQLHDKIGTTLAMNSKKSLSPALIDVWRIT
SEAHNNVSQLPLTLMPFNKTEEFLSNIGDFSYKTSVRDLDQKPLDKKEYTTLNSLYKQAENIQNQLRSVQHLVMSKNLRW
MDVEMALASDKKQSDNTIVDSFKTVEKNVGAFSEDSISPTFTGANTERKGFTHLKGKQITEKEAVKIAQRFAPDHNYSIK
VVKSGRKTNRDVYSIRMKDADNKSFIYMDITQKGGHPVYLIQKRAVKKQKISLNEASNRAVAFLKKNGYETKGLEIDESA
QYNNIGVFSFIPVEKNVRIYPEAIRMKVALDDGEVVGFSARDYLAAHRTRTIPAPALSADEAKAKLNKNVEVRETRQALI
TNELGQEVLCYEMLGTIGKDTYQMFINADDGKEEKIEKLKSAEPIYKDL

Sequences:

>Translated_449_residues
MIRGIIIAVLGVAIAATGYWGYKEHQEKDAVLLHAENNYQRAFHELTYHVDQLHDKIGTTLAMNSKKSLSPALIDVWRIT
SEAHNNVSQLPLTLMPFNKTEEFLSNIGDFSYKTSVRDLDQKPLDKKEYTTLNSLYKQAENIQNQLRSVQHLVMSKNLRW
MDVEMALASDKKQSDNTIVDSFKTVEKNVGAFSEDSISPTFTGANTERKGFTHLKGKQITEKEAVKIAQRFAPDHNYSIK
VVKSGRKTNRDVYSIRMKDADNKSFIYMDITQKGGHPVYLIQKRAVKKQKISLNEASNRAVAFLKKNGYETKGLEIDESA
QYNNIGVFSFIPVEKNVRIYPEAIRMKVALDDGEVVGFSARDYLAAHRTRTIPAPALSADEAKAKLNKNVEVRETRQALI
TNELGQEVLCYEMLGTIGKDTYQMFINADDGKEEKIEKLKSAEPIYKDL
>Mature_449_residues
MIRGIIIAVLGVAIAATGYWGYKEHQEKDAVLLHAENNYQRAFHELTYHVDQLHDKIGTTLAMNSKKSLSPALIDVWRIT
SEAHNNVSQLPLTLMPFNKTEEFLSNIGDFSYKTSVRDLDQKPLDKKEYTTLNSLYKQAENIQNQLRSVQHLVMSKNLRW
MDVEMALASDKKQSDNTIVDSFKTVEKNVGAFSEDSISPTFTGANTERKGFTHLKGKQITEKEAVKIAQRFAPDHNYSIK
VVKSGRKTNRDVYSIRMKDADNKSFIYMDITQKGGHPVYLIQKRAVKKQKISLNEASNRAVAFLKKNGYETKGLEIDESA
QYNNIGVFSFIPVEKNVRIYPEAIRMKVALDDGEVVGFSARDYLAAHRTRTIPAPALSADEAKAKLNKNVEVRETRQALI
TNELGQEVLCYEMLGTIGKDTYQMFINADDGKEEKIEKLKSAEPIYKDL

Specific function: Required for spore cortex hydrolysis during germination. Appears to be required for either expression, localization, activation or function of sleB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ypeB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014239 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50884; Mature: 50884

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRGIIIAVLGVAIAATGYWGYKEHQEKDAVLLHAENNYQRAFHELTYHVDQLHDKIGTT
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCE
LAMNSKKSLSPALIDVWRITSEAHNNVSQLPLTLMPFNKTEEFLSNIGDFSYKTSVRDLD
EEECCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHCC
QKPLDKKEYTTLNSLYKQAENIQNQLRSVQHLVMSKNLRWMDVEMALASDKKQSDNTIVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCHHHH
SFKTVEKNVGAFSEDSISPTFTGANTERKGFTHLKGKQITEKEAVKIAQRFAPDHNYSIK
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE
VVKSGRKTNRDVYSIRMKDADNKSFIYMDITQKGGHPVYLIQKRAVKKQKISLNEASNRA
EEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCE
VAFLKKNGYETKGLEIDESAQYNNIGVFSFIPVEKNVRIYPEAIRMKVALDDGEVVGFSA
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECH
RDYLAAHRTRTIPAPALSADEAKAKLNKNVEVRETRQALITNELGQEVLCYEMLGTIGKD
HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TYQMFINADDGKEEKIEKLKSAEPIYKDL
EEEEEEECCCCHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MIRGIIIAVLGVAIAATGYWGYKEHQEKDAVLLHAENNYQRAFHELTYHVDQLHDKIGTT
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCE
LAMNSKKSLSPALIDVWRITSEAHNNVSQLPLTLMPFNKTEEFLSNIGDFSYKTSVRDLD
EEECCCCCCCHHHHHHHHHHHHHCCCHHHCCEEEECCCHHHHHHHHCCCCCCCCHHHHCC
QKPLDKKEYTTLNSLYKQAENIQNQLRSVQHLVMSKNLRWMDVEMALASDKKQSDNTIVD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHCCCCCCCCHHHH
SFKTVEKNVGAFSEDSISPTFTGANTERKGFTHLKGKQITEKEAVKIAQRFAPDHNYSIK
HHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE
VVKSGRKTNRDVYSIRMKDADNKSFIYMDITQKGGHPVYLIQKRAVKKQKISLNEASNRA
EEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCE
VAFLKKNGYETKGLEIDESAQYNNIGVFSFIPVEKNVRIYPEAIRMKVALDDGEVVGFSA
EEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEEEEEECCCCEEEECH
RDYLAAHRTRTIPAPALSADEAKAKLNKNVEVRETRQALITNELGQEVLCYEMLGTIGKD
HHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TYQMFINADDGKEEKIEKLKSAEPIYKDL
EEEEEEECCCCHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 8830707; 3145906; 10658652; 12177332 [H]