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The map label for this gene is ypiB

Identifier: 154686506

GI number: 154686506

Start: 2172251

End: 2172790

Strand: Reverse

Name: ypiB

Synonym: RBAM_020740

Alternate gene names: NA

Gene position: 2172790-2172251 (Counterclockwise)

Preceding gene: 154686507

Following gene: 154686505

Centisome position: 55.45

GC content: 41.48

Gene sequence:

>540_bases
ATGCAGACCCCTGTTTCTGTCAATGAAAAAAAGGATTTTATCCGTTGGTTTTTAAATCATTATCAGCTTAAACGCCGGGA
GTGCGTCTGGATTTTAAATTATTTAATGAGTCATGATTCTTTAATGGAAAAAGTCCATTTTGTAGAACAAGCCGAATTTT
GCCCGCGAGGCATTATCATGTCTACTCATTGCGTTGATGAGGTGCCGTTTAGGTTTTACAAAGAAAATGTCATGACTACG
GACGCGGAAAAATCTTTTCACGACATCCGGTTAAATAAACAGCAGGATTTATTTATCCAGCTGAATTTCCGTTCGGCCTA
CAGCTCACCGGAATATGCCGCTGTTCTTGAATCAAATCCGCATCTGCCGAAAGACCTGTTTGAAAATAAACAGGATCAGG
GGATGGCCGAAAAAATATTAGAACACGCCATTTCCACTTTCCAGCGGGAAAAGCTGCTTAAAGATATCGACGAGGCGCTG
GACCGCCACGACAAAGAAACATTTGAAAAGCTTTCCCGCCAATTGAATCAGCTCACATAA

Upstream 100 bases:

>100_bases
CGGATAGAGGATGAATTTTTAAGATAAGCAGGATTTTGGACCATGCTTGCTGAATGTATAAGTGATGTCAGATTATACGA
TCGATAGAGGAGGGAATTAC

Downstream 100 bases:

>100_bases
ATGACAGCCTTGCAGAATATGCAAGGCTTGTTGCGTAAAGAGGAGGAACGAGACATGAGATGGAGGGCCGCTGATGCCGA
TGCCTATTTACAATCTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVDEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNPHLPKDLFENKQDQGMAEKILEHAISTFQREKLLKDIDEAL
DRHDKETFEKLSRQLNQLT

Sequences:

>Translated_179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVDEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNPHLPKDLFENKQDQGMAEKILEHAISTFQREKLLKDIDEAL
DRHDKETFEKLSRQLNQLT
>Mature_179_residues
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIMSTHCVDEVPFRFYKENVMTT
DAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNPHLPKDLFENKQDQGMAEKILEHAISTFQREKLLKDIDEAL
DRHDKETFEKLSRQLNQLT

Specific function: Unknown

COG id: COG5582

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0302 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2074_BACA2 (A7Z610)

Other databases:

- EMBL:   CP000560
- RefSeq:   YP_001421667.1
- ProteinModelPortal:   A7Z610
- STRING:   A7Z610
- EnsemblBacteria:   EBBACT00000005657
- GeneID:   5462612
- GenomeReviews:   CP000560_GR
- KEGG:   bay:RBAM_020740
- eggNOG:   COG5582
- GeneTree:   EBGT00050000000902
- HOGENOM:   HBG313418
- OMA:   QLKRREC
- ProtClustDB:   PRK03636
- BioCyc:   BAMY326423:RBAM_020740-MONOMER
- HAMAP:   MF_00760
- InterPro:   IPR011188
- InterPro:   IPR014957
- InterPro:   IPR014963
- PIRSF:   PIRSF007165
- SMART:   SM00914

Pfam domain/function: PF08858 IDEAL; PF08864 UPF0302

EC number: NA

Molecular weight: Translated: 21414; Mature: 21414

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
STHCVDEVPFRFYKENVMTTDAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCEEEECCCC
HLPKDLFENKQDQGMAEKILEHAISTFQREKLLKDIDEALDRHDKETFEKLSRQLNQLT
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQTPVSVNEKKDFIRWFLNHYQLKRRECVWILNYLMSHDSLMEKVHFVEQAEFCPRGIIM
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
STHCVDEVPFRFYKENVMTTDAEKSFHDIRLNKQQDLFIQLNFRSAYSSPEYAAVLESNP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEECHHCCCCCCEEEECCCC
HLPKDLFENKQDQGMAEKILEHAISTFQREKLLKDIDEALDRHDKETFEKLSRQLNQLT
CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA