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The map label for this gene is ypiF [H]

Identifier: 154686505

GI number: 154686505

Start: 2171750

End: 2172196

Strand: Reverse

Name: ypiF [H]

Synonym: RBAM_020730

Alternate gene names: 154686505

Gene position: 2172196-2171750 (Counterclockwise)

Preceding gene: 154686506

Following gene: 154686504

Centisome position: 55.43

GC content: 42.28

Gene sequence:

>447_bases
ATGAGATGGAGGGCCGCTGATGCCGATGCCTATTTACAATCTGCGGATTACATTGATACCGCTGTCATTCCGTTAATTTC
CATAACATCTTCAGGAGGCTTAAAAGAGGCCGTTGAACAGGGGGAAAGCACCCAATTGCTTTCTGAAGAGCTTGAGCGCC
AATTGAAGGGACGGGTATATTTATTCCCCTCTTATACATATGTTGATATAGACCAATCACAAATCGCCCTGCTTCAAAAA
CTCAAAGACGAGGTGATGACCAACTTTCGGCACGTCTTGTTCCTGACGGCAGACGAAAAATGGAAGGATTCTGAAATAGG
TTCTGATGTCATATACATACCTGCCGTTCCGTTTGAACATATGAAAGACTCTTTAAAGAGAAAAATTGCGGATGACAAGT
GCGGAGAAATTTTGAACGTTTTGTTACAGAAGTGGAACAATTCATAA

Upstream 100 bases:

>100_bases
AGAAACATTTGAAAAGCTTTCCCGCCAATTGAATCAGCTCACATAAATGACAGCCTTGCAGAATATGCAAGGCTTGTTGC
GTAAAGAGGAGGAACGAGAC

Downstream 100 bases:

>100_bases
AAACTGCAGGCATCCCGCAAAACACCCGTTTTGCCTCTGTTGACCTTGCTGAAAGATTCATATATTATGAGGGTGTCAAA
TCTCAGAATTATTTTCTATT

Product: YpiF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRWRAADADAYLQSADYIDTAVIPLISITSSGGLKEAVEQGESTQLLSEELERQLKGRVYLFPSYTYVDIDQSQIALLQK
LKDEVMTNFRHVLFLTADEKWKDSEIGSDVIYIPAVPFEHMKDSLKRKIADDKCGEILNVLLQKWNNS

Sequences:

>Translated_148_residues
MRWRAADADAYLQSADYIDTAVIPLISITSSGGLKEAVEQGESTQLLSEELERQLKGRVYLFPSYTYVDIDQSQIALLQK
LKDEVMTNFRHVLFLTADEKWKDSEIGSDVIYIPAVPFEHMKDSLKRKIADDKCGEILNVLLQKWNNS
>Mature_148_residues
MRWRAADADAYLQSADYIDTAVIPLISITSSGGLKEAVEQGESTQLLSEELERQLKGRVYLFPSYTYVDIDQSQIALLQK
LKDEVMTNFRHVLFLTADEKWKDSEIGSDVIYIPAVPFEHMKDSLKRKIADDKCGEILNVLLQKWNNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019615 [H]

Pfam domain/function: PF10673 DUF2487 [H]

EC number: NA

Molecular weight: Translated: 16885; Mature: 16885

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWRAADADAYLQSADYIDTAVIPLISITSSGGLKEAVEQGESTQLLSEELERQLKGRVY
CCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEE
LFPSYTYVDIDQSQIALLQKLKDEVMTNFRHVLFLTADEKWKDSEIGSDVIYIPAVPFEH
ECCCCEEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCCHHH
MKDSLKRKIADDKCGEILNVLLQKWNNS
HHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRWRAADADAYLQSADYIDTAVIPLISITSSGGLKEAVEQGESTQLLSEELERQLKGRVY
CCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEE
LFPSYTYVDIDQSQIALLQKLKDEVMTNFRHVLFLTADEKWKDSEIGSDVIYIPAVPFEH
ECCCCEEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCCHHH
MKDSLKRKIADDKCGEILNVLLQKWNNS
HHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 7592464 [H]