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The map label for this gene is ypjB [H]

Identifier: 154686500

GI number: 154686500

Start: 2168083

End: 2168865

Strand: Reverse

Name: ypjB [H]

Synonym: RBAM_020680

Alternate gene names: 154686500

Gene position: 2168865-2168083 (Counterclockwise)

Preceding gene: 154686501

Following gene: 154686499

Centisome position: 55.35

GC content: 47.0

Gene sequence:

>783_bases
ATGAAACGAAAGCTGACGATCTGTCTTTTACTTGCTCTTATGTGTTTCATCACAACTGCCAAAGCTGAAGATGAGGGCGG
TCTCAAGGAACTGAACGACCTTTCGGATACCGTTTTCCAAATGACGCGGCATTCGCAGTATGATGAGGCTCTGCAAGTGC
TTGGCTACTTTAAGAAAAAAATGACACACGTAAACTCACTGAGCGGCGCCGAAGTCAGGCAGGTGACTCTGGGTTTCAAT
GATTTAGTGCGCGTTCTGAAACAGGCAGACGCCTCAGATACCGAAAAAATCCGGGCAGCCGCCCAGTTCAGGTTGGTAAT
GGATGCGATGGAAGACCACTCCGATCCGCTGTGGGGTTCGCTTGAAAGACCGATTATGGCGACATTCAGCGCCTTAAAAG
AAGATGTCAGCGGAAACGGAAGTGAAAATTTCAATGAAAAGTGGAATGAATTTATATCATTATATGATTTAATTTATCCC
AGCCTGACAATGGATGTGTCGGCCGGCCAGCTTGATACGGTGGCGAAACATATCGAGGTGATTGAGCAGGACGGGTTTCA
GCAGATGACAAAAGGAACAAAGCTTGAGCGTCTGACGCTCCTGCAGCAGGATTTAAAGCGGGTTTTTGACAAGGTGGAGC
GGGATGACGCTGACCCTTCGCTGCTCTGGGTCATTCTGACAACAGGCGGTATCATTATTACTGCGCTGACATATGTCGGC
TACCGAAAATACAGAGCGGAAAAAAAGAAAGAGAAAAAGCGTGAGTATCCTAAGTCTAAATAA

Upstream 100 bases:

>100_bases
TCTAAAAGACGGATAAAGCTTGACTTACACTGATAGAATCTTGGTCTAACCTTGTCCCGCTCCTCATATTCTGTAAAGAG
AAGGAGTGGGAGGGACCTCT

Downstream 100 bases:

>100_bases
ACACAAATTGCTGTAAAGGAGCTAAGGCAGTGAAAAAACTCATCCAGCAATTGGCTTCAAAACACCTCCCGCAGCCGATC
AGAGGCAGAAAAGGGGCGAC

Product: YpjB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKRKLTICLLLALMCFITTAKAEDEGGLKELNDLSDTVFQMTRHSQYDEALQVLGYFKKKMTHVNSLSGAEVRQVTLGFN
DLVRVLKQADASDTEKIRAAAQFRLVMDAMEDHSDPLWGSLERPIMATFSALKEDVSGNGSENFNEKWNEFISLYDLIYP
SLTMDVSAGQLDTVAKHIEVIEQDGFQQMTKGTKLERLTLLQQDLKRVFDKVERDDADPSLLWVILTTGGIIITALTYVG
YRKYRAEKKKEKKREYPKSK

Sequences:

>Translated_260_residues
MKRKLTICLLLALMCFITTAKAEDEGGLKELNDLSDTVFQMTRHSQYDEALQVLGYFKKKMTHVNSLSGAEVRQVTLGFN
DLVRVLKQADASDTEKIRAAAQFRLVMDAMEDHSDPLWGSLERPIMATFSALKEDVSGNGSENFNEKWNEFISLYDLIYP
SLTMDVSAGQLDTVAKHIEVIEQDGFQQMTKGTKLERLTLLQQDLKRVFDKVERDDADPSLLWVILTTGGIIITALTYVG
YRKYRAEKKKEKKREYPKSK
>Mature_260_residues
MKRKLTICLLLALMCFITTAKAEDEGGLKELNDLSDTVFQMTRHSQYDEALQVLGYFKKKMTHVNSLSGAEVRQVTLGFN
DLVRVLKQADASDTEKIRAAAQFRLVMDAMEDHSDPLWGSLERPIMATFSALKEDVSGNGSENFNEKWNEFISLYDLIYP
SLTMDVSAGQLDTVAKHIEVIEQDGFQQMTKGTKLERLTLLQQDLKRVFDKVERDDADPSLLWVILTTGGIIITALTYVG
YRKYRAEKKKEKKREYPKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014231 [H]

Pfam domain/function: PF09577 Spore_YpjB [H]

EC number: NA

Molecular weight: Translated: 29629; Mature: 29629

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]