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The map label for this gene is ypjD [H]

Identifier: 154686497

GI number: 154686497

Start: 2165504

End: 2165839

Strand: Reverse

Name: ypjD [H]

Synonym: RBAM_020650

Alternate gene names: 154686497

Gene position: 2165839-2165504 (Counterclockwise)

Preceding gene: 154686499

Following gene: 154686496

Centisome position: 55.27

GC content: 45.54

Gene sequence:

>336_bases
GTGAGTGACAAAACGATGAAAGACTTACAAGCTGAGGTCGATGAATATATCGGCCAATTCAAAGAAGGCTATTTCAGCCC
GCTTGCCATGATGGCCCGTCTCACGGAAGAGCTGGGCGAACTTGCAAGAGAAGTCAACCATTATTATGGGGAAAAGCCGA
AGAAAACGACGGAAAATGAGAAAAGCATGGAAGAGGAAATGGGCGATGTGCTGTTCGTCCTGATCTGCCTCGCCAACTCC
CTTGATATTTCATTGGAGGAAGCTCATAACCGCGTCATGCATAAATTTAATACACGTGATAAAGACCGCTGGACTAGAAA
AGAAGAAGGAAAGTAG

Upstream 100 bases:

>100_bases
ATAGTGGATACAAAAGAAAACAGCAAACTGCCGTTTTTAACATTTGTCAAATGTACTTGAATTAGCTAACATGGAAGAGA
TGACAGGAGGTATTCGCACA

Downstream 100 bases:

>100_bases
GAGAAACCATGTCAAATGAAACCATTAAAGTCGTCATTGCCGGACCGAGAGGCAGAATGGGCCAGGAGGCCGTAAAACTT
GCCGTCCGCACGCCTCATTT

Product: YpjD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSDKTMKDLQAEVDEYIGQFKEGYFSPLAMMARLTEELGELAREVNHYYGEKPKKTTENEKSMEEEMGDVLFVLICLANS
LDISLEEAHNRVMHKFNTRDKDRWTRKEEGK

Sequences:

>Translated_111_residues
MSDKTMKDLQAEVDEYIGQFKEGYFSPLAMMARLTEELGELAREVNHYYGEKPKKTTENEKSMEEEMGDVLFVLICLANS
LDISLEEAHNRVMHKFNTRDKDRWTRKEEGK
>Mature_110_residues
SDKTMKDLQAEVDEYIGQFKEGYFSPLAMMARLTEELGELAREVNHYYGEKPKKTTENEKSMEEEMGDVLFVLICLANSL
DISLEEAHNRVMHKFNTRDKDRWTRKEEGK

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012359
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 13025; Mature: 12894

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKTMKDLQAEVDEYIGQFKEGYFSPLAMMARLTEELGELAREVNHYYGEKPKKTTENE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KSMEEEMGDVLFVLICLANSLDISLEEAHNRVMHKFNTRDKDRWTRKEEGK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
SDKTMKDLQAEVDEYIGQFKEGYFSPLAMMARLTEELGELAREVNHYYGEKPKKTTENE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
KSMEEEMGDVLFVLICLANSLDISLEEAHNRVMHKFNTRDKDRWTRKEEGK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]