| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is yngHB [H]
Identifier: 154686269
GI number: 154686269
Start: 1924667
End: 1924879
Strand: Reverse
Name: yngHB [H]
Synonym: RBAM_018360
Alternate gene names: 154686269
Gene position: 1924879-1924667 (Counterclockwise)
Preceding gene: 154686270
Following gene: 154686268
Centisome position: 49.12
GC content: 42.25
Gene sequence:
>213_bases ATGAGCGTCATAAAAATTCAGATGGCGGGAAACCTGTGGAAAATTCATGTGAAGCCGGGTGATGTCATTGAAGAAGGACA GGAAGTGGCCATCTTGGAATCTATGAAAATGGAAATTCCGATTATCGCTGATGCAGCGGGTACGGTGAAAGAAGTGAAAA AATCAGAAGGTGATTTCACTGATGAAGGAGAGGTCCTGATTGAACTTCAATAA
Upstream 100 bases:
>100_bases CCAACATTCCGCTGCTGACAAAAATTGCCCATTCAGAAGTGTTTGAAAAGGGCGAGGCAACAACCGGTTTTTTACAAACA ATGAACGAGGGGGCGTCAAA
Downstream 100 bases:
>100_bases AACGGGAGGTGCAGCATGAACTGTCCGAAACATGTCCGCATCAATGAAGTAGGACCGCGTGACGGCTTGCAGAATGAATC GGCGTGGGTGGATACAGAAG
Product: acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
Products: NA
Alternate protein names: BLAP [H]
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MSVIKIQMAGNLWKIHVKPGDVIEEGQEVAILESMKMEIPIIADAAGTVKEVKKSEGDFTDEGEVLIELQ
Sequences:
>Translated_70_residues MSVIKIQMAGNLWKIHVKPGDVIEEGQEVAILESMKMEIPIIADAAGTVKEVKKSEGDFTDEGEVLIELQ >Mature_69_residues SVIKIQMAGNLWKIHVKPGDVIEEGQEVAILESMKMEIPIIADAAGTVKEVKKSEGDFTDEGEVLIELQ
Specific function: Unknown
COG id: COG0511
COG function: function code I; Biotin carboxyl carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI65506442, Length=69, Percent_Identity=43.4782608695652, Blast_Score=63, Evalue=6e-11, Organism=Homo sapiens, GI189095269, Length=69, Percent_Identity=43.4782608695652, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000089 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl [H]
EC number: NA
Molecular weight: Translated: 7681; Mature: 7550
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: PS50968 BIOTINYL_LIPOYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIKIQMAGNLWKIHVKPGDVIEEGQEVAILESMKMEIPIIADAAGTVKEVKKSEGDFT CCEEEEEECCCEEEEEECCCCHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCC DEGEVLIELQ CCCEEEEEEC >Mature Secondary Structure SVIKIQMAGNLWKIHVKPGDVIEEGQEVAILESMKMEIPIIADAAGTVKEVKKSEGDFT CEEEEEECCCEEEEEECCCCHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHCCCCCC DEGEVLIELQ CCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10557314; 9384377 [H]