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The map label for this gene is yobO [H]

Identifier: 154686192

GI number: 154686192

Start: 1820888

End: 1823305

Strand: Reverse

Name: yobO [H]

Synonym: RBAM_017590

Alternate gene names: 154686192

Gene position: 1823305-1820888 (Counterclockwise)

Preceding gene: 154686196

Following gene: 154686191

Centisome position: 46.53

GC content: 48.55

Gene sequence:

>2418_bases
ATGGTTCAATTTAAAAACTTTCCTGATCCGTCTTTAAACGCCCCATTGCAGTCTCGCCCTGCACAGCCCTCTGAATTGGA
GCATCTCAAAGCAAGGATGCAGAATTTTATTAAGCATTCCGCAACGGATGATAATCTTGAGATCGCAGATGCCCGGGTGA
CGGCGGAAGGAATGGTCACCTCACTTTTAAAAGAACGGCTTGATACAGAATACGAAATGCTTATGAATAAAATCACCCGG
GAAGTGAATGTGGAGGACTACGGAGCGATCCCTGACGGCCGGGACAATACGGAAGCCTTTCGGAGAGCGATCGGGAACGG
CCGGGTCAAAGTAAATGTTCCCGCAGGAGAATTTTTGGTTCAAGGGATAAAACTCCCCTCATGGACTACCATTTACGGTG
AGGGACAAGGGATTACCGTGCTTAAGCTTCATGAGGACACTCCCGCATTCGAATGGGTCATTACTAACGATGATTACGAA
AATGGAAACCGTAATATTTTTGTCGAAAACATGACTTTAGACTGGAATCCTGATCGTCAATGCGGGGTCAGGAACCCCGG
AGGACAGTTTTCCAGCTGTTTAACGTTTGCTAATGTGCAATACGGCTGGATTAAGAATGTTGAAACGGTTAACGCGGGTC
TCCATGGTATTGATATTACATCTCCGACTTACGATCATTTGCCTGAAACAGAATGGACGAAAGACGGCTGCCGATATATA
TGGATTGATAACTGTGTGGCATACGGCGCCGGAGACGACGGCATTACCACCCATTACAGCGAGTATATTTTCATCTCCAA
CTGCCATTCCGGAAACCCCCGCGGCACAGAGCATGCTGAGGGCAGCGCAAACTCGAACGGCATTGAAATTGACGACGGCT
CTAAACATGTATGGCTTTTAAATAACTATACGAGCGGAAATATCCGCGGGATTGAGGTAAAGGCGCACAGCCTGTGGCCG
GCTTCTCAAAATGTTCATATTATCGGTCATGTTTCGTATCGTGATGTACGTTCATTTGATATTCGTCATATCGGCCATCA
TCAGGCCTCAGACCCCGAAAGCACGACGGCTTATGATGTTACTTTAACCGATTGCACCGCGATTGAACCGGTATTCAATG
CTCTCTATGACGGTGTGACCCCGAGGGCGCTGGTCATCTCTGCCTATAAAAACGTTAATGTAAACGGATTCACAGCTATT
GGTGATCCCTCATACGACTATGGCGGGAATCCAGTCGTGGCTCTTCAATACCGCAGTCAAAATATCACGATCAACGGCAT
TAAAATACGCGGCTTTACACAAGCAGGTGTTGACATCAATATATCCGGCGGATCAAATAAAACCGATTATGTTAAAATTT
TAAATTTTGATATATACAAGTCATCTCCTAAAGGCATCTCAATCGGCGGAGGCCAATATAACGTAAATATTATGAACGGT
ACGATGATCGGAGACGGCGGTTCCGTCGGAATTACGTCCCCTAACAGTCAGGCCGTCATTCTCGGGGTGCAAGCGGAAGG
TTACAGCGCGGCCGCATCTATAAAAGGACAGACTTATGAGCAGATCCCCGTCAATTTAAAGGGAGGCGCACAGCTCGCGA
CCAGCTCCGGTTTTGCATTCAACCCGACAAGCGCCGTTATTGCGGGAACAGGCGATATTACGGCCAGAGGTGACAGAAAT
GCGATCATCAGCTCTTCCGGAGGTTCAAGTTCTGAAGGTTCAAGGGCATTTATCGCCGCTTCAAACAATGCCCATATTAC
GGGCAGCAAAGTCTCCAGAACGATTCTGTCATCAGAAAGCATTACATTGGAAGAACCATACACGGTTGCCGGAGGGCATC
AGTCCATCAAATGGAAACTGGATTCAGCGGGCGGCCACGGTACGTTCGCCGGAGCTGTCACCTCTTCCCTGTCAGGGTAC
GGAGAATATTTTGAAAGTGTAACCGGCCAGACAATTCCCGCCGGGACGATCGTCACAGTGAAAGGCGAAAAAATTGAATC
GGCTCACGTCGGAGATTACATGCTCGGCGTCATTTCAGAAACAGCCGCTTTTATCTCAGGAGCCGCAAGCTTCGGATGGC
AAAGCCGCTTTTTGACAAACGAGTTCGGCGGTTTCATATACGAAAATGTGACTGACGAGGAAACAGGAGAAACGGTACGC
GTGCCGAAACAAAACCCAGACTGCAGTCCGGCTCTTGAAGCTGACTATGAAGCACGCGCGGCCAGAGACGAATGGCACAT
TGTCGGACTCAACGGCCGGCATTACGTACGGGTCGACAGTACGGTCAGCCCGGGAGATTATATCACGGCCCATAACGGAA
TCGGGACTAAAGCCGCGGAAGGCTGGAAGGTATTGAAACTGACAGCCTTATACAGTTCTGAAAAAGGGTACGGCATTGCA
ATTGCGGTTATCAAATAG

Upstream 100 bases:

>100_bases
TCTGAATAAAGAATTTGAAGAATAAGCGCTTAAAGGGCGCGCGACTCTTTTCTGTCCCCTGCCTCAGGCGCTTATATCAA
AAGAAAGAGGTGTCTTTAGA

Downstream 100 bases:

>100_bases
GGTCTCAATATCAGGATCATCTCCTCTCTTTTCTATCGGGCGGGTATGATCCTGTTTTTTATACCGAATGAGATGCCTCT
TTTTCAGCATACCGTTTCAT

Product: YobO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 805; Mature: 805

Protein sequence:

>805_residues
MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVTSLLKERLDTEYEMLMNKITR
EVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLVQGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYE
NGNRNIFVENMTLDWNPDRQCGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI
WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLLNNYTSGNIRGIEVKAHSLWP
ASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDVTLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAI
GDPSYDYGGNPVVALQYRSQNITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG
TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAFNPTSAVIAGTGDITARGDRN
AIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSESITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGY
GEYFESVTGQTIPAGTIVTVKGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR
VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAEGWKVLKLTALYSSEKGYGIA
IAVIK

Sequences:

>Translated_805_residues
MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVTSLLKERLDTEYEMLMNKITR
EVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLVQGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYE
NGNRNIFVENMTLDWNPDRQCGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI
WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLLNNYTSGNIRGIEVKAHSLWP
ASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDVTLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAI
GDPSYDYGGNPVVALQYRSQNITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG
TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAFNPTSAVIAGTGDITARGDRN
AIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSESITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGY
GEYFESVTGQTIPAGTIVTVKGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR
VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAEGWKVLKLTALYSSEKGYGIA
IAVIK
>Mature_805_residues
MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVTSLLKERLDTEYEMLMNKITR
EVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLVQGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYE
NGNRNIFVENMTLDWNPDRQCGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI
WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLLNNYTSGNIRGIEVKAHSLWP
ASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDVTLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAI
GDPSYDYGGNPVVALQYRSQNITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG
TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAFNPTSAVIAGTGDITARGDRN
AIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSESITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGY
GEYFESVTGQTIPAGTIVTVKGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR
VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAEGWKVLKLTALYSSEKGYGIA
IAVIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021865
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF11962 DUF3476 [H]

EC number: NA

Molecular weight: Translated: 86736; Mature: 86736

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVT
CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHH
SLLKERLDTEYEMLMNKITREVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHH
QGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYENGNRNIFVENMTLDWNPDRQ
CCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCC
CGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI
CCCCCCCCCHHHHEEEECCCCCHHCCCEEECCCCEEEECCCCCHHCCCCCCCCCCCCEEE
WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLL
EEECEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE
NNYTSGNIRGIEVKAHSLWPASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDV
ECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEE
TLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAIGDPSYDYGGNPVVALQYRSQ
EECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEECC
NITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG
EEEEEEEEEEEEEECCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEEEC
TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAF
EEECCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEECCEEECCCCEEEECCCCEE
NPTSAVIAGTGDITARGDRNAIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSES
CCCCEEEEECCCEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEECHHHEEEEECCCC
ITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGYGEYFESVTGQTIPAGTIVTV
EEECCCEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
KGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR
ECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCEEE
VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAE
CCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCC
GWKVLKLTALYSSEKGYGIAIAVIK
CEEEEEEEEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MVQFKNFPDPSLNAPLQSRPAQPSELEHLKARMQNFIKHSATDDNLEIADARVTAEGMVT
CCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHH
SLLKERLDTEYEMLMNKITREVNVEDYGAIPDGRDNTEAFRRAIGNGRVKVNVPAGEFLV
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCHHHHH
QGIKLPSWTTIYGEGQGITVLKLHEDTPAFEWVITNDDYENGNRNIFVENMTLDWNPDRQ
CCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEEECCCCCCC
CGVRNPGGQFSSCLTFANVQYGWIKNVETVNAGLHGIDITSPTYDHLPETEWTKDGCRYI
CCCCCCCCCHHHHEEEECCCCCHHCCCEEECCCCEEEECCCCCHHCCCCCCCCCCCCEEE
WIDNCVAYGAGDDGITTHYSEYIFISNCHSGNPRGTEHAEGSANSNGIEIDDGSKHVWLL
EEECEEEECCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE
NNYTSGNIRGIEVKAHSLWPASQNVHIIGHVSYRDVRSFDIRHIGHHQASDPESTTAYDV
ECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCCEEEEE
TLTDCTAIEPVFNALYDGVTPRALVISAYKNVNVNGFTAIGDPSYDYGGNPVVALQYRSQ
EECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEECC
NITINGIKIRGFTQAGVDINISGGSNKTDYVKILNFDIYKSSPKGISIGGGQYNVNIMNG
EEEEEEEEEEEEEECCEEEEECCCCCCCCEEEEEEEEEECCCCCEEEECCCEEEEEEEEC
TMIGDGGSVGITSPNSQAVILGVQAEGYSAAASIKGQTYEQIPVNLKGGAQLATSSGFAF
EEECCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCEEEECCEEECCCCEEEECCCCEE
NPTSAVIAGTGDITARGDRNAIISSSGGSSSEGSRAFIAASNNAHITGSKVSRTILSSES
CCCCEEEEECCCEEECCCCCEEEECCCCCCCCCCEEEEEECCCCEEECHHHEEEEECCCC
ITLEEPYTVAGGHQSIKWKLDSAGGHGTFAGAVTSSLSGYGEYFESVTGQTIPAGTIVTV
EEECCCEEEECCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
KGEKIESAHVGDYMLGVISETAAFISGAASFGWQSRFLTNEFGGFIYENVTDEETGETVR
ECCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCCCCCEEE
VPKQNPDCSPALEADYEARAARDEWHIVGLNGRHYVRVDSTVSPGDYITAHNGIGTKAAE
CCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCCCCC
GWKVLKLTALYSSEKGYGIAIAVIK
CEEEEEEEEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]