| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is blt [H]
Identifier: 154685509
GI number: 154685509
Start: 1052259
End: 1053455
Strand: Reverse
Name: blt [H]
Synonym: RBAM_010750
Alternate gene names: 154685509
Gene position: 1053455-1052259 (Counterclockwise)
Preceding gene: 154685510
Following gene: 154685508
Centisome position: 26.88
GC content: 46.53
Gene sequence:
>1197_bases ATGCAAAAACCGATCAGAGAACAAAAGGCTGTACTCATCATCTTATTAAGCAATATATTTATTGCGTTTTTAGGCATCGG ATTGATCATTCCCGTTATGCCGCTGTTTATGAATGTGATGCACTTGACGGGCAGCACAATGGGATACCTTGTCGCTGCCT TCGCCGTTGCGCAGTTAATTGCATCCCCCATTGCGGGGAGATGGGTTGACCGCTTCGGCAGAAAAATCATGATTCTCGCC GGACTGTTTTTGTTCGCATTATCCGAACTGACCTTCGGATTGGGCACACATGTCTCCATTTTATATTTCGCAAGGGTGCT GGGGGGCATCAGTGCCGCTTTTATCATGCCCGCTGTTACAGCGTATGTCGCAGATATTACGACGGTGCAGGAAAGATCGA AGGCGATGGGCTATGTATCTGCCGCCATCAGCACAGGGTTTATCATCGGGCCCGGCATAGGAGGATTTATTGCCGATCAC GGCGTTCGTATGCCGTTTTTCTTTGCGGCGGGAATTGCATTTATCGCAGTGATTTCCTCTGTCTTTATGCTGAAAGAGCC GTTAACTAAAGAAGAACGCGCAAAGCAGATGGAAAGCGTCAAAGAATCAACTTTCTTAAAAGATTTGAAAAAGTCGATTC ATCCAAACTACTTGATCGCCTTTATCATCGTTTTTGTTTTGGCATTCGGACTGTCGGCGTACGAAACGGTATTCAGCTTA TTTACAAACCATAAATTCGGCTTCACGCCAAAGGATATCGCCATTATTATTACGTTCAGCTCCATTGTGGCGGTCCTCAT TCAAGTGCTCGCGTTCGGAAGACTTGTCAACTTCCTCGGGGAGAAAAAAGTCATTCAGCTTTGTCTGATCATCGGCGCTG TGCTGGCTTTCGTTTCTACGGTGATGTCAGGATTTTTGCCCGTGCTCGCTGTCACCTGCATCATTTTCCTTGCGTTTGAT TTACTGCGCCCGGCACTGACTACTTATTTATCGAAAATCGCAGGAAATCAGCAGGGGTTTGTTGCCGGTATGAACTCAAC ATACACGAGTTTGGGCACTATTTTCGGCCCGGCTCTGGGCGGTATTTTATTTGATATGAATATTCACTTCCCGTTTCTAT TCGCAGGTGTGGTTTTATTTCTCGGTCTGGGATTGACCTTTGTGTGGAAAGGAAAAGCAGGCGAGGTTTCGGAGTAG
Upstream 100 bases:
>100_bases TCAGCAAAGAATCGAATTGCAAAAAGAAGCCATCTCCGTGTTTATTCACGGGTCGATCAGCGCTGATAAACAGAATGACA GCTGACAAAGGAGAAACAAC
Downstream 100 bases:
>100_bases GGTGCACTCACCCATCTCCGGAGCTTTTTTTGCGTTTTCGATAAGAAAAACGAATGGATTATGAGAAATAATTCATTATT TATTTATCTCAAAATCTATA
Product: major facilitator transporter
Products: Proton [Cytoplasm]; drug [Periplasm] [C]
Alternate protein names: Multidrug-efflux transporter 2 [H]
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MQKPIREQKAVLIILLSNIFIAFLGIGLIIPVMPLFMNVMHLTGSTMGYLVAAFAVAQLIASPIAGRWVDRFGRKIMILA GLFLFALSELTFGLGTHVSILYFARVLGGISAAFIMPAVTAYVADITTVQERSKAMGYVSAAISTGFIIGPGIGGFIADH GVRMPFFFAAGIAFIAVISSVFMLKEPLTKEERAKQMESVKESTFLKDLKKSIHPNYLIAFIIVFVLAFGLSAYETVFSL FTNHKFGFTPKDIAIIITFSSIVAVLIQVLAFGRLVNFLGEKKVIQLCLIIGAVLAFVSTVMSGFLPVLAVTCIIFLAFD LLRPALTTYLSKIAGNQQGFVAGMNSTYTSLGTIFGPALGGILFDMNIHFPFLFAGVVLFLGLGLTFVWKGKAGEVSE
Sequences:
>Translated_398_residues MQKPIREQKAVLIILLSNIFIAFLGIGLIIPVMPLFMNVMHLTGSTMGYLVAAFAVAQLIASPIAGRWVDRFGRKIMILA GLFLFALSELTFGLGTHVSILYFARVLGGISAAFIMPAVTAYVADITTVQERSKAMGYVSAAISTGFIIGPGIGGFIADH GVRMPFFFAAGIAFIAVISSVFMLKEPLTKEERAKQMESVKESTFLKDLKKSIHPNYLIAFIIVFVLAFGLSAYETVFSL FTNHKFGFTPKDIAIIITFSSIVAVLIQVLAFGRLVNFLGEKKVIQLCLIIGAVLAFVSTVMSGFLPVLAVTCIIFLAFD LLRPALTTYLSKIAGNQQGFVAGMNSTYTSLGTIFGPALGGILFDMNIHFPFLFAGVVLFLGLGLTFVWKGKAGEVSE >Mature_398_residues MQKPIREQKAVLIILLSNIFIAFLGIGLIIPVMPLFMNVMHLTGSTMGYLVAAFAVAQLIASPIAGRWVDRFGRKIMILA GLFLFALSELTFGLGTHVSILYFARVLGGISAAFIMPAVTAYVADITTVQERSKAMGYVSAAISTGFIIGPGIGGFIADH GVRMPFFFAAGIAFIAVISSVFMLKEPLTKEERAKQMESVKESTFLKDLKKSIHPNYLIAFIIVFVLAFGLSAYETVFSL FTNHKFGFTPKDIAIIITFSSIVAVLIQVLAFGRLVNFLGEKKVIQLCLIIGAVLAFVSTVMSGFLPVLAVTCIIFLAFD LLRPALTTYLSKIAGNQQGFVAGMNSTYTSLGTIFGPALGGILFDMNIHFPFLFAGVVLFLGLGLTFVWKGKAGEVSE
Specific function: Energy-dependent efflux pump responsible for decreased drug accumulation in multi-drug-resistant cells. Probably uses a transmembrane proton gradient as the energy source. Causes the efflux of a variety of toxic substances, including such structurally div
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Homo sapiens, GI217416366, Length=394, Percent_Identity=23.6040609137056, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI39753965, Length=319, Percent_Identity=26.6457680250784, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1787291, Length=385, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=6e-16, Organism=Drosophila melanogaster, GI17738085, Length=354, Percent_Identity=27.9661016949153, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI17137160, Length=232, Percent_Identity=25.4310344827586, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI221513297, Length=366, Percent_Identity=24.3169398907104, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357569, Length=371, Percent_Identity=24.7978436657682, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI62471713, Length=270, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI62471717, Length=270, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI62471715, Length=270, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24656463, Length=371, Percent_Identity=24.7978436657682, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI24656468, Length=371, Percent_Identity=24.7978436657682, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI45550550, Length=297, Percent_Identity=26.5993265993266, Blast_Score=65, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 - InterPro: IPR005829 - InterPro: IPR001958 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42993; Mature: 42993
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKPIREQKAVLIILLSNIFIAFLGIGLIIPVMPLFMNVMHLTGSTMGYLVAAFAVAQLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ASPIAGRWVDRFGRKIMILAGLFLFALSELTFGLGTHVSILYFARVLGGISAAFIMPAVT HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH AYVADITTVQERSKAMGYVSAAISTGFIIGPGIGGFIADHGVRMPFFFAAGIAFIAVISS HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH VFMLKEPLTKEERAKQMESVKESTFLKDLKKSIHPNYLIAFIIVFVLAFGLSAYETVFSL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH FTNHKFGFTPKDIAIIITFSSIVAVLIQVLAFGRLVNFLGEKKVIQLCLIIGAVLAFVST HHCCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMSGFLPVLAVTCIIFLAFDLLRPALTTYLSKIAGNQQGFVAGMNSTYTSLGTIFGPALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH GILFDMNIHFPFLFAGVVLFLGLGLTFVWKGKAGEVSE HHHEECCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCC >Mature Secondary Structure MQKPIREQKAVLIILLSNIFIAFLGIGLIIPVMPLFMNVMHLTGSTMGYLVAAFAVAQLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ASPIAGRWVDRFGRKIMILAGLFLFALSELTFGLGTHVSILYFARVLGGISAAFIMPAVT HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH AYVADITTVQERSKAMGYVSAAISTGFIIGPGIGGFIADHGVRMPFFFAAGIAFIAVISS HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHH VFMLKEPLTKEERAKQMESVKESTFLKDLKKSIHPNYLIAFIIVFVLAFGLSAYETVFSL HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHH FTNHKFGFTPKDIAIIITFSSIVAVLIQVLAFGRLVNFLGEKKVIQLCLIIGAVLAFVST HHCCCCCCCCCHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VMSGFLPVLAVTCIIFLAFDLLRPALTTYLSKIAGNQQGFVAGMNSTYTSLGTIFGPALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHH GILFDMNIHFPFLFAGVVLFLGLGLTFVWKGKAGEVSE HHHEECCCCHHHHHHHHHHHHHCCHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; drug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + drug [Cytoplasm] = Proton [Cytoplasm] + drug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7608059; 8969508; 9384377 [H]