Click here to switch to the map view.

The map label for this gene is yhgC [H]

Identifier: 154685467

GI number: 154685467

Start: 1010431

End: 1010931

Strand: Reverse

Name: yhgC [H]

Synonym: RBAM_010330

Alternate gene names: 154685467

Gene position: 1010931-1010431 (Counterclockwise)

Preceding gene: 154685474

Following gene: 154685466

Centisome position: 25.8

GC content: 47.31

Gene sequence:

>501_bases
ATGAAGGTTTATATTACATACGGGACAGCCGATTTTTTAAAGACGATTGCAAAGAAACACCCGAGTGAGAATATGGTGCT
GATGCAAGGGGGGGATAATGCGGTTTTAATTCATGAAACAAATGGAGAAACCGTTTTTCAGGCGCCCCATTCCTATGAAA
GCATCGACAGCGTCGGGGAAATCAAAAATCCGGGCTACGCCGTCCTCAACAACATCGCCGTTACCCAGGAAGGCCGTCCG
CTGTTTGAAAACCGGTTTAAAAACCGCGCCGGCAAAGTGGAAAATGAACCCGGTTTTCAAGCCATCCGCGTATTAAGACC
GCTCGAAGGCGATACGTATGTCATTTTGACCCTGTGGGAAGAGGAAAAAGCCTTTCAGGATTGGCAGCAGTCAAACTCTT
ATCAGGAAGCTCATAAAAAACGCGGAACATCTGCAGGCATCGACACGACGTCTATTTTCTCCCGCCCGTCTTATGTAACC
GCTTATTACGCAATAGACTGA

Upstream 100 bases:

>100_bases
TTGTAGTATGGGAAATATTGTTTCGAATTATGTCAGAATGAGTCGCCAATAGAAACTTATACCACTCTTTTGATATACTA
GCAAGCAGGAGGTGGCTGAT

Downstream 100 bases:

>100_bases
AAACCGCCGGAGATTCTCCGGCTTTTTTGATGTCCCGATTTTACGCATCCTTCTTTGCACCTTCCGCCCGCCTATGAATA
ACCTGTAGCAATCCTATTTA

Product: YhgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKVYITYGTADFLKTIAKKHPSENMVLMQGGDNAVLIHETNGETVFQAPHSYESIDSVGEIKNPGYAVLNNIAVTQEGRP
LFENRFKNRAGKVENEPGFQAIRVLRPLEGDTYVILTLWEEEKAFQDWQQSNSYQEAHKKRGTSAGIDTTSIFSRPSYVT
AYYAID

Sequences:

>Translated_166_residues
MKVYITYGTADFLKTIAKKHPSENMVLMQGGDNAVLIHETNGETVFQAPHSYESIDSVGEIKNPGYAVLNNIAVTQEGRP
LFENRFKNRAGKVENEPGFQAIRVLRPLEGDTYVILTLWEEEKAFQDWQQSNSYQEAHKKRGTSAGIDTTSIFSRPSYVT
AYYAID
>Mature_166_residues
MKVYITYGTADFLKTIAKKHPSENMVLMQGGDNAVLIHETNGETVFQAPHSYESIDSVGEIKNPGYAVLNNIAVTQEGRP
LFENRFKNRAGKVENEPGFQAIRVLRPLEGDTYVILTLWEEEKAFQDWQQSNSYQEAHKKRGTSAGIDTTSIFSRPSYVT
AYYAID

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 18712; Mature: 18712

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYITYGTADFLKTIAKKHPSENMVLMQGGDNAVLIHETNGETVFQAPHSYESIDSVGE
CEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHC
IKNPGYAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFQAIRVLRPLEGDTYVILTLWE
CCCCCCEEHCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEC
EEKAFQDWQQSNSYQEAHKKRGTSAGIDTTSIFSRPSYVTAYYAID
CHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MKVYITYGTADFLKTIAKKHPSENMVLMQGGDNAVLIHETNGETVFQAPHSYESIDSVGE
CEEEEEECCHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHC
IKNPGYAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFQAIRVLRPLEGDTYVILTLWE
CCCCCCEEHCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEC
EEKAFQDWQQSNSYQEAHKKRGTSAGIDTTSIFSRPSYVTAYYAID
CHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335642; 9579061; 9384377 [H]