Definition Bacillus amyloliquefaciens FZB42, complete genome.
Accession NC_009725
Length 3,918,589

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The map label for this gene is yhdL [H]

Identifier: 154685409

GI number: 154685409

Start: 955076

End: 956149

Strand: Reverse

Name: yhdL [H]

Synonym: RBAM_009750

Alternate gene names: 154685409

Gene position: 956149-955076 (Counterclockwise)

Preceding gene: 154685410

Following gene: 154685408

Centisome position: 24.4

GC content: 45.44

Gene sequence:

>1074_bases
ATGAATGAAGAATTTAAAAAGCGTTTTTACCAATACAAAAATGGAGAAATGAGCGACCGGGAAATGGCCGCCTTTGAAGA
AGAGCTGGAAAAGCTGGAAGTCTATCAGGAGTTGATTGAAAGCGAAATGCAGGACGACCGGGAATGGGACGTCGGCATCA
GCCCGGAAAAACAGAAGGCCATTTTATCATACGGAAAACGCAAATCGTATTTGCGGATTTCAGTTCTCGCCGTCATCTCC
ACTTTGATGATTTTGCCGCTTTGTACATTAGGAAGCTACCTCTATTACGGTCTGGGAGGAAAAGAAAGCACCGGCAATCA
ATTAATGGAGACCGCGGCAGTGACGGTGGCGACCACAATGCCGAACGTCCTCGTCGATACCTCCGGACTGAAAAGCCAGG
TGAAGCTGTTTGGAATGAATACGGAATTTCCGTTGCAAAAGCAGATCGGCACAAAAACGAAATCCGTCGGCGGAGAACGG
ATTGAAATGTTTTTAGATACGGTCAAATCGCCTGCCGTTAACTACTATGATCTAGACGCGGCACAGGCAAAGCATTATTT
CGCCCATCCTTCCGGCTTAAAGGAACGCACGATTGACAAAGCCGGACAGACATTAAAAAAATTGCCTGAAGGAAGCGTGG
CGGAGGTCTATCTTTCTTATGACAGGGCCTACCCTTCTTCTCAAGTATATTCGACTTTTAAAAAATACGATGTGAAGTTT
TTATGGAACGCGGTCGAAACGGAGAAAAATCTGAAAGACAGTCCTTATGCAGAGCCGTTAGGATTTCCCGGGAAAGATTC
CAAGATGGTGTCCTCTTTCGAAACGCAAGGACAGACAGACCGTGAACAATTTATCAATGCCCTTGAATTTATGTCCCGCC
ATAAAAAATGGGCGCATGCAATATCGAAACGCAAAGACATGAATCTTGGCAGCCGAATCGACTATGTTGAACATCACGGA
ATGAACGTATACGGCTCTGTCGTGACGGGGCCGACAAAAGAAATCGAACGTCTGCTGAAAAACAAAACAGTAAAAGCAGC
AAACATCGGTGAGGTGGAATTATGGAATTGGTAA

Upstream 100 bases:

>100_bases
GAAGCATCCCATATTATGAATATTTCAGAGGCTAATTTTAAAAGTGTTTTATTTCGTGCCAGACAGCGGCTGAAAGCACT
TTATAATAGAGGTGTTAATG

Downstream 100 bases:

>100_bases
GAATTTTTAAAGAGCATAATGTTTTCGGCTGGATATCAGTCGGTACCGCGATTTTGTCGCTGCTGCTTTTGAACGTGGCA
ATCATCAGCAATGTGACTTT

Product: YhdL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKAILSYGKRKSYLRISVLAVIS
TLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTMPNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGER
IEMFLDTVKSPAVNYYDLDAAQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF
LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHAISKRKDMNLGSRIDYVEHHG
MNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW

Sequences:

>Translated_357_residues
MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKAILSYGKRKSYLRISVLAVIS
TLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTMPNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGER
IEMFLDTVKSPAVNYYDLDAAQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF
LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHAISKRKDMNLGSRIDYVEHHG
MNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW
>Mature_357_residues
MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKAILSYGKRKSYLRISVLAVIS
TLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTMPNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGER
IEMFLDTVKSPAVNYYDLDAAQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF
LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHAISKRKDMNLGSRIDYVEHHG
MNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40649; Mature: 40649

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKA
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ILSYGKRKSYLRISVLAVISTLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTM
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
PNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGERIEMFLDTVKSPAVNYYDLDA
CCCEEECCCCHHEEEEEECCCCCCHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCEEECCH
AQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHH
LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHA
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ISKRKDMNLGSRIDYVEHHGMNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW
HHHHHCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEECCC
>Mature Secondary Structure
MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKA
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
ILSYGKRKSYLRISVLAVISTLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTM
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
PNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGERIEMFLDTVKSPAVNYYDLDA
CCCEEECCCCHHEEEEEECCCCCCHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCEEECCH
AQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHH
LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHA
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ISKRKDMNLGSRIDYVEHHGMNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW
HHHHHCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377; 10216858 [H]