| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is yhdL [H]
Identifier: 154685409
GI number: 154685409
Start: 955076
End: 956149
Strand: Reverse
Name: yhdL [H]
Synonym: RBAM_009750
Alternate gene names: 154685409
Gene position: 956149-955076 (Counterclockwise)
Preceding gene: 154685410
Following gene: 154685408
Centisome position: 24.4
GC content: 45.44
Gene sequence:
>1074_bases ATGAATGAAGAATTTAAAAAGCGTTTTTACCAATACAAAAATGGAGAAATGAGCGACCGGGAAATGGCCGCCTTTGAAGA AGAGCTGGAAAAGCTGGAAGTCTATCAGGAGTTGATTGAAAGCGAAATGCAGGACGACCGGGAATGGGACGTCGGCATCA GCCCGGAAAAACAGAAGGCCATTTTATCATACGGAAAACGCAAATCGTATTTGCGGATTTCAGTTCTCGCCGTCATCTCC ACTTTGATGATTTTGCCGCTTTGTACATTAGGAAGCTACCTCTATTACGGTCTGGGAGGAAAAGAAAGCACCGGCAATCA ATTAATGGAGACCGCGGCAGTGACGGTGGCGACCACAATGCCGAACGTCCTCGTCGATACCTCCGGACTGAAAAGCCAGG TGAAGCTGTTTGGAATGAATACGGAATTTCCGTTGCAAAAGCAGATCGGCACAAAAACGAAATCCGTCGGCGGAGAACGG ATTGAAATGTTTTTAGATACGGTCAAATCGCCTGCCGTTAACTACTATGATCTAGACGCGGCACAGGCAAAGCATTATTT CGCCCATCCTTCCGGCTTAAAGGAACGCACGATTGACAAAGCCGGACAGACATTAAAAAAATTGCCTGAAGGAAGCGTGG CGGAGGTCTATCTTTCTTATGACAGGGCCTACCCTTCTTCTCAAGTATATTCGACTTTTAAAAAATACGATGTGAAGTTT TTATGGAACGCGGTCGAAACGGAGAAAAATCTGAAAGACAGTCCTTATGCAGAGCCGTTAGGATTTCCCGGGAAAGATTC CAAGATGGTGTCCTCTTTCGAAACGCAAGGACAGACAGACCGTGAACAATTTATCAATGCCCTTGAATTTATGTCCCGCC ATAAAAAATGGGCGCATGCAATATCGAAACGCAAAGACATGAATCTTGGCAGCCGAATCGACTATGTTGAACATCACGGA ATGAACGTATACGGCTCTGTCGTGACGGGGCCGACAAAAGAAATCGAACGTCTGCTGAAAAACAAAACAGTAAAAGCAGC AAACATCGGTGAGGTGGAATTATGGAATTGGTAA
Upstream 100 bases:
>100_bases GAAGCATCCCATATTATGAATATTTCAGAGGCTAATTTTAAAAGTGTTTTATTTCGTGCCAGACAGCGGCTGAAAGCACT TTATAATAGAGGTGTTAATG
Downstream 100 bases:
>100_bases GAATTTTTAAAGAGCATAATGTTTTCGGCTGGATATCAGTCGGTACCGCGATTTTGTCGCTGCTGCTTTTGAACGTGGCA ATCATCAGCAATGTGACTTT
Product: YhdL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKAILSYGKRKSYLRISVLAVIS TLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTMPNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGER IEMFLDTVKSPAVNYYDLDAAQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHAISKRKDMNLGSRIDYVEHHG MNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW
Sequences:
>Translated_357_residues MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKAILSYGKRKSYLRISVLAVIS TLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTMPNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGER IEMFLDTVKSPAVNYYDLDAAQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHAISKRKDMNLGSRIDYVEHHG MNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW >Mature_357_residues MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKAILSYGKRKSYLRISVLAVIS TLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTMPNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGER IEMFLDTVKSPAVNYYDLDAAQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHAISKRKDMNLGSRIDYVEHHG MNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40649; Mature: 40649
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKA CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ILSYGKRKSYLRISVLAVISTLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTM HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC PNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGERIEMFLDTVKSPAVNYYDLDA CCCEEECCCCHHEEEEEECCCCCCHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCEEECCH AQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHH LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ISKRKDMNLGSRIDYVEHHGMNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW HHHHHCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure MNEEFKKRFYQYKNGEMSDREMAAFEEELEKLEVYQELIESEMQDDREWDVGISPEKQKA CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH ILSYGKRKSYLRISVLAVISTLMILPLCTLGSYLYYGLGGKESTGNQLMETAAVTVATTM HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC PNVLVDTSGLKSQVKLFGMNTEFPLQKQIGTKTKSVGGERIEMFLDTVKSPAVNYYDLDA CCCEEECCCCHHEEEEEECCCCCCHHHHHCCHHHHCCHHHHHHHHHHHCCCCCCEEECCH AQAKHYFAHPSGLKERTIDKAGQTLKKLPEGSVAEVYLSYDRAYPSSQVYSTFKKYDVKF HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEEHHHHCCCHHHHHHHHHHHHHHH LWNAVETEKNLKDSPYAEPLGFPGKDSKMVSSFETQGQTDREQFINALEFMSRHKKWAHA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ISKRKDMNLGSRIDYVEHHGMNVYGSVVTGPTKEIERLLKNKTVKAANIGEVELWNW HHHHHCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 10216858 [H]