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The map label for this gene is yfiV [H]

Identifier: 154685306

GI number: 154685306

Start: 847600

End: 848082

Strand: Reverse

Name: yfiV [H]

Synonym: RBAM_008520

Alternate gene names: 154685306

Gene position: 848082-847600 (Counterclockwise)

Preceding gene: 154685310

Following gene: 154685305

Centisome position: 21.64

GC content: 45.55

Gene sequence:

>483_bases
ATGGATTATAATCTGCATGATACAACAGTATTAAGCGGCGATATTTTTTCTCCTGAGGAACGGGATATTTGGGTGCTGTA
CATGAAAGTGATGACATCGGCGGGGCTCGGTGATGTGTCGGAGTGGATGAAGCTTGATATGAGCATGCCGCAAATGAAAG
TGCTGATGCTTCTGAACAACCACGGGACGCTTAAGGTGAGTGACATAGCGGAGAAAATGGGCGCTTCCCTTTCAAATACG
ACGGGGCTGCTTGACCGTTTAGAAAAATCATGTTTCATTACACGCGCTCCGTCAGAAGAAGACCGCCGTTCAGTCGTCGT
TCAATTAACGGAAAACGCGAAAGATATTTTCCGCAGCCTTTATCAAAAAGGACATGTAAAATTGAAGCGTTCATTGGAAA
CGCTGACTGCTGAAGAAAAACAAACGGTCAATCAAGGGCTTGCCATTTTGGCAAGAGCGCTTGATTCTTCCAAACAGGGA
TAG

Upstream 100 bases:

>100_bases
CACTACCACCTCACATTCAAACAAAACTCGTCTGCAACTTTCTTTCTCTGATTAAAATCAGTAATATGGTATGCAGGAGT
ATAAATGAGGAAGTGAGACG

Downstream 100 bases:

>100_bases
AGATGAAAAAGGCCTGCCGGTATCGGCGGCCTTTTTTTGTTTGACATTTAATTCACTTGAAGTGAATAATATATTCGAAG
TGAATTAAAAACGGGAGGAT

Product: YfiV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MDYNLHDTTVLSGDIFSPEERDIWVLYMKVMTSAGLGDVSEWMKLDMSMPQMKVLMLLNNHGTLKVSDIAEKMGASLSNT
TGLLDRLEKSCFITRAPSEEDRRSVVVQLTENAKDIFRSLYQKGHVKLKRSLETLTAEEKQTVNQGLAILARALDSSKQG

Sequences:

>Translated_160_residues
MDYNLHDTTVLSGDIFSPEERDIWVLYMKVMTSAGLGDVSEWMKLDMSMPQMKVLMLLNNHGTLKVSDIAEKMGASLSNT
TGLLDRLEKSCFITRAPSEEDRRSVVVQLTENAKDIFRSLYQKGHVKLKRSLETLTAEEKQTVNQGLAILARALDSSKQG
>Mature_160_residues
MDYNLHDTTVLSGDIFSPEERDIWVLYMKVMTSAGLGDVSEWMKLDMSMPQMKVLMLLNNHGTLKVSDIAEKMGASLSNT
TGLLDRLEKSCFITRAPSEEDRRSVVVQLTENAKDIFRSLYQKGHVKLKRSLETLTAEEKQTVNQGLAILARALDSSKQG

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17953; Mature: 17953

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYNLHDTTVLSGDIFSPEERDIWVLYMKVMTSAGLGDVSEWMKLDMSMPQMKVLMLLNN
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHEECC
HGTLKVSDIAEKMGASLSNTTGLLDRLEKSCFITRAPSEEDRRSVVVQLTENAKDIFRSL
CCCEEHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YQKGHVKLKRSLETLTAEEKQTVNQGLAILARALDSSKQG
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDYNLHDTTVLSGDIFSPEERDIWVLYMKVMTSAGLGDVSEWMKLDMSMPQMKVLMLLNN
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHEECC
HGTLKVSDIAEKMGASLSNTTGLLDRLEKSCFITRAPSEEDRRSVVVQLTENAKDIFRSL
CCCEEHHHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
YQKGHVKLKRSLETLTAEEKQTVNQGLAILARALDSSKQG
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]