| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
Click here to switch to the map view.
The map label for this gene is 154685256
Identifier: 154685256
GI number: 154685256
Start: 790665
End: 791804
Strand: Reverse
Name: 154685256
Synonym: RBAM_008020
Alternate gene names: NA
Gene position: 791804-790665 (Counterclockwise)
Preceding gene: 154685257
Following gene: 154685255
Centisome position: 20.21
GC content: 42.54
Gene sequence:
>1140_bases TTGAAGATAACAGGACACAAACGAAACCGCATGTCTTACAAGAAAAAGCTGTTTTACGTGATAACAGCGCTCTGTTTTAT CAGCTCGTTCATTTTCGTCACTCACAATGCTTCTTTTTATGAGCGGCCGATTGCCAAAGTGACGAAAACAACATTGGAAC ATCAGTCTGACGTACAGGACATGCATAAAAACAAAGATAAGATTTTCAATCAGACGATCACTGCCAGACTTGAAAACGGC AGTCAGAAAGGACAGCTCATTCATTTGCCCAATCAGTATTCATCATCCGGAGCGAACGATCAAAAATATTCGATTGGCGA TGAAGTATTCGTTTCTATTGATAAAGGGAAACCATCAAACAAGGATATATCGGGAAGCATTATAGATAAAAAACGGGATA AACAGCTTTTGCTGATCGCTTGGGTTTTCATCTTCACCTTGCTTATCGTCGGAAAAAAACAAGGCTTCTTTTCGATCGTC AGCCTGATGTTTAACGCCGTTTTACTGTCGTTTGCATTAGATTTGTACAGGAAGCATCCTAATACAGGGTTAATTTTCAT CTGCGGTATCTGTATTCTCATCTTTACTGTCATCTCATTGCTGCTTGTCAGCGGTTTTCACGCGAAAACATACGCTGCCA TTGCCGCGACGCTCGCAGGCACTTTCGTTTCCCTGCTGATTACGTATCTGGTGATGCTGGCAACCGGAGAGAAAGGTCTC AGATATGAGGAAATGCAGTATTTAACCCGCCCTTATCACACGGTGTTCATGGCCGGGGTATTTATCGGATCACTGGGAGC GGTCATGGATGTGGCCATTACCATGACGTCATCTGTCTTCGGATTATATGAAGAAAACAAGGGTATCTCATTACAAGCTC TCAGACGTTCCGGGATGGAGATCGGAAAAGACATCATGGGGGCGATGACCAATATTCTGTTTTTTGCTTATATAAGCGGC TCTATTCCGATGATGCTTTTGTATTTGAAAAATGATTCCCCGATAGGATTCACTCTTTCTATGAACATTTCCTTGGAAAT AGCCAGAGCATTGGCCGGAGGGATCGGAATTGTATTAGCCATACCCGCCAGTCTGTATGCTTCTATCTTTTTTATTAAAC GAAAGAAGGCAAGCTCATGA
Upstream 100 bases:
>100_bases AAATATGAACGTTATTCGCGAGAGACATACATCCGCATCGTTTAACACTTCACGGCAGGGCCTCTCTTTCATACGGCGCC GCCTGTTTGGAGGACTTTTT
Downstream 100 bases:
>100_bases ATGTCATCGTAATTCTCGCGGCGATTTTATTTCTATTGATGGTCATCATCGGCGGAAAAAAAGGAGCGAGGTCTTTTATT GCGTTATTCTTAAATTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Multitransmembrane Protein; Integral Membrane Protein; YibE/F-Like Protein; Lipoprotein; Multitransmembrane Protein-Like Protein; YibE/F-Like Family Protein; YibE/F Superfamily Transporter
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MKITGHKRNRMSYKKKLFYVITALCFISSFIFVTHNASFYERPIAKVTKTTLEHQSDVQDMHKNKDKIFNQTITARLENG SQKGQLIHLPNQYSSSGANDQKYSIGDEVFVSIDKGKPSNKDISGSIIDKKRDKQLLLIAWVFIFTLLIVGKKQGFFSIV SLMFNAVLLSFALDLYRKHPNTGLIFICGICILIFTVISLLLVSGFHAKTYAAIAATLAGTFVSLLITYLVMLATGEKGL RYEEMQYLTRPYHTVFMAGVFIGSLGAVMDVAITMTSSVFGLYEENKGISLQALRRSGMEIGKDIMGAMTNILFFAYISG SIPMMLLYLKNDSPIGFTLSMNISLEIARALAGGIGIVLAIPASLYASIFFIKRKKASS
Sequences:
>Translated_379_residues MKITGHKRNRMSYKKKLFYVITALCFISSFIFVTHNASFYERPIAKVTKTTLEHQSDVQDMHKNKDKIFNQTITARLENG SQKGQLIHLPNQYSSSGANDQKYSIGDEVFVSIDKGKPSNKDISGSIIDKKRDKQLLLIAWVFIFTLLIVGKKQGFFSIV SLMFNAVLLSFALDLYRKHPNTGLIFICGICILIFTVISLLLVSGFHAKTYAAIAATLAGTFVSLLITYLVMLATGEKGL RYEEMQYLTRPYHTVFMAGVFIGSLGAVMDVAITMTSSVFGLYEENKGISLQALRRSGMEIGKDIMGAMTNILFFAYISG SIPMMLLYLKNDSPIGFTLSMNISLEIARALAGGIGIVLAIPASLYASIFFIKRKKASS >Mature_379_residues MKITGHKRNRMSYKKKLFYVITALCFISSFIFVTHNASFYERPIAKVTKTTLEHQSDVQDMHKNKDKIFNQTITARLENG SQKGQLIHLPNQYSSSGANDQKYSIGDEVFVSIDKGKPSNKDISGSIIDKKRDKQLLLIAWVFIFTLLIVGKKQGFFSIV SLMFNAVLLSFALDLYRKHPNTGLIFICGICILIFTVISLLLVSGFHAKTYAAIAATLAGTFVSLLITYLVMLATGEKGL RYEEMQYLTRPYHTVFMAGVFIGSLGAVMDVAITMTSSVFGLYEENKGISLQALRRSGMEIGKDIMGAMTNILFFAYISG SIPMMLLYLKNDSPIGFTLSMNISLEIARALAGGIGIVLAIPASLYASIFFIKRKKASS
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42032; Mature: 42032
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITGHKRNRMSYKKKLFYVITALCFISSFIFVTHNASFYERPIAKVTKTTLEHQSDVQD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH MHKNKDKIFNQTITARLENGSQKGQLIHLPNQYSSSGANDQKYSIGDEVFVSIDKGKPSN HHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCC KDISGSIIDKKRDKQLLLIAWVFIFTLLIVGKKQGFFSIVSLMFNAVLLSFALDLYRKHP CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NTGLIFICGICILIFTVISLLLVSGFHAKTYAAIAATLAGTFVSLLITYLVMLATGEKGL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RYEEMQYLTRPYHTVFMAGVFIGSLGAVMDVAITMTSSVFGLYEENKGISLQALRRSGME CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCHH IGKDIMGAMTNILFFAYISGSIPMMLLYLKNDSPIGFTLSMNISLEIARALAGGIGIVLA HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECHHHHHHHHHCCCCEEEH IPASLYASIFFIKRKKASS HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKITGHKRNRMSYKKKLFYVITALCFISSFIFVTHNASFYERPIAKVTKTTLEHQSDVQD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH MHKNKDKIFNQTITARLENGSQKGQLIHLPNQYSSSGANDQKYSIGDEVFVSIDKGKPSN HHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCEECCCEEEEEEECCCCCC KDISGSIIDKKRDKQLLLIAWVFIFTLLIVGKKQGFFSIVSLMFNAVLLSFALDLYRKHP CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC NTGLIFICGICILIFTVISLLLVSGFHAKTYAAIAATLAGTFVSLLITYLVMLATGEKGL CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RYEEMQYLTRPYHTVFMAGVFIGSLGAVMDVAITMTSSVFGLYEENKGISLQALRRSGME CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCHH IGKDIMGAMTNILFFAYISGSIPMMLLYLKNDSPIGFTLSMNISLEIARALAGGIGIVLA HHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEEECHHHHHHHHHCCCCEEEH IPASLYASIFFIKRKKASS HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA