| Definition | Bacillus amyloliquefaciens FZB42, complete genome. |
|---|---|
| Accession | NC_009725 |
| Length | 3,918,589 |
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The map label for this gene is 154685255
Identifier: 154685255
GI number: 154685255
Start: 789907
End: 790668
Strand: Reverse
Name: 154685255
Synonym: RBAM_008010
Alternate gene names: NA
Gene position: 790668-789907 (Counterclockwise)
Preceding gene: 154685256
Following gene: 154685250
Centisome position: 20.18
GC content: 40.55
Gene sequence:
>762_bases ATGAATGTCATCGTAATTCTCGCGGCGATTTTATTTCTATTGATGGTCATCATCGGCGGAAAAAAAGGAGCGAGGTCTTT TATTGCGTTATTCTTAAATTTCGGTGTTCTCTTTCTCACCATCATTTTCATGACAGACCCGCATATCAATCCGATTGTTT TAACATTGCTCTCTTCCGCCGTGATTTGCAGCATTACTCTTTTTTATATTAATGGAGGAAACGTCAAAACCGTAACCGCC TTTATTTCTGCAATGCTGACGATTGTACTGCTGCTGTTTTTTATTATGTCTGTAACAAAACATACTTCAATTCAGGGATT CGGTGAAGAAGAATTGGGTGATATCGGCATATTCACACTGTTTGTCGGGGTGGATTTTGTGAAGGTTACCGCAGCCATGA TCATCATGGGCACGATAGGGGCGATTACCGATGTCGCGATTTCCATTACTTCACCCATGCGGGAAATTTACAGTCATAAT CCGTCCATGAGCAGAAAAGATCTGTACACATTCGGATTAAGCATCGGGAGAGATATTTTAGGAACGAATACGAATACGTT ATTCTTTGCTTTTTTCGGCAGCTATTTGGCTTTAATTATCTGGTTTAAAGACTTATCATACTCAGCTGAAAAAATAGTGA ACTCAAAAGTATTCAGTGCGGAAGCCGTTACCATTCTTTGTGCCGGAATCGGGATCGGCATCATCATTCCCGTTACGTCC TGGATCACCGCCTGTTTTTTAGCAAAACCAAATAAACGTTAA
Upstream 100 bases:
>100_bases AAATAGCCAGAGCATTGGCCGGAGGGATCGGAATTGTATTAGCCATACCCGCCAGTCTGTATGCTTCTATCTTTTTTATT AAACGAAAGAAGGCAAGCTC
Downstream 100 bases:
>100_bases AAGCTGCCGGGACACGCCCGGCAGCCTTTTTTATCTTATACCCACTTTACAACGTCTTTTGAGGCAGATCTTGTTTTCGG GCGCGGTTCTCTGACACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Multitransmembrane Protein; Integral Membrane Protein; YibE/F-Like Protein; Conserved Multi-Transmembrane Protein
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNVIVILAAILFLLMVIIGGKKGARSFIALFLNFGVLFLTIIFMTDPHINPIVLTLLSSAVICSITLFYINGGNVKTVTA FISAMLTIVLLLFFIMSVTKHTSIQGFGEEELGDIGIFTLFVGVDFVKVTAAMIIMGTIGAITDVAISITSPMREIYSHN PSMSRKDLYTFGLSIGRDILGTNTNTLFFAFFGSYLALIIWFKDLSYSAEKIVNSKVFSAEAVTILCAGIGIGIIIPVTS WITACFLAKPNKR
Sequences:
>Translated_253_residues MNVIVILAAILFLLMVIIGGKKGARSFIALFLNFGVLFLTIIFMTDPHINPIVLTLLSSAVICSITLFYINGGNVKTVTA FISAMLTIVLLLFFIMSVTKHTSIQGFGEEELGDIGIFTLFVGVDFVKVTAAMIIMGTIGAITDVAISITSPMREIYSHN PSMSRKDLYTFGLSIGRDILGTNTNTLFFAFFGSYLALIIWFKDLSYSAEKIVNSKVFSAEAVTILCAGIGIGIIIPVTS WITACFLAKPNKR >Mature_253_residues MNVIVILAAILFLLMVIIGGKKGARSFIALFLNFGVLFLTIIFMTDPHINPIVLTLLSSAVICSITLFYINGGNVKTVTA FISAMLTIVLLLFFIMSVTKHTSIQGFGEEELGDIGIFTLFVGVDFVKVTAAMIIMGTIGAITDVAISITSPMREIYSHN PSMSRKDLYTFGLSIGRDILGTNTNTLFFAFFGSYLALIIWFKDLSYSAEKIVNSKVFSAEAVTILCAGIGIGIIIPVTS WITACFLAKPNKR
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27477; Mature: 27477
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVIVILAAILFLLMVIIGGKKGARSFIALFLNFGVLFLTIIFMTDPHINPIVLTLLSSA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VICSITLFYINGGNVKTVTAFISAMLTIVLLLFFIMSVTKHTSIQGFGEEELGDIGIFTL HHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH FVGVDFVKVTAAMIIMGTIGAITDVAISITSPMREIYSHNPSMSRKDLYTFGLSIGRDIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHH GTNTNTLFFAFFGSYLALIIWFKDLSYSAEKIVNSKVFSAEAVTILCAGIGIGIIIPVTS CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH WITACFLAKPNKR HHHHHHHCCCCCC >Mature Secondary Structure MNVIVILAAILFLLMVIIGGKKGARSFIALFLNFGVLFLTIIFMTDPHINPIVLTLLSSA CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VICSITLFYINGGNVKTVTAFISAMLTIVLLLFFIMSVTKHTSIQGFGEEELGDIGIFTL HHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH FVGVDFVKVTAAMIIMGTIGAITDVAISITSPMREIYSHNPSMSRKDLYTFGLSIGRDIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHHH GTNTNTLFFAFFGSYLALIIWFKDLSYSAEKIVNSKVFSAEAVTILCAGIGIGIIIPVTS CCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH WITACFLAKPNKR HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA